Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0687 ATGGCTACACTCTGTCTTCTGATTTTGGATCAATCATGTCTACACATGTTCCACAATGTTATGTTTGAGGATCGTCCATATCATCAAGTAGGGTTATCGCTTCGTATGAGAAAATTGCTTGATTTTTTGGGGTGGCAATACATTATGATGAAAGATTTGTTCATGGTCGAAATTTGGGGCCCTGCAGGTATTGGTAAAACTACAATTGCCAAAGAATTTTATGATAGAGTTGGTGGCAATTTTGAAGGGAAGATTTTCTTGCAAAATCAAACCGATAAGCATCAATTTATAAAAGATGTTAGGCAACAACTTTGTTCAGATACTTCTGGAGTTGAAATAGAGGCAAATGATGTCTTATTGACATGCATGTCACCCCGTAAAAGAGTCCTAATAATATTTGATGATGTAGATGATACTGATGTTGATGATTATATTTGCCATGTATTGCGTAAAAGTAGAAAGTTGTTTGGTAAAGGGAGTTTGATATTCCTTATAGCAAGACAGATGTCTCCCTCTATCGGCTTTGTTGACTCATCGTATGAAATGAAAGTGTTAGACAGTCATGAGTCTCTTAAGCTGTTCAGTTTGTACGCATTTAAGAAATTTCCTCCAGCGAAGGGTTTTGAGAATCTTTCAAAGAAAGTCGTTTCTAAATGTTTTGGCCTACCATTGGTTCTTGAAATAATTGGCTCTCTTTTGCATAAAAGGACAATACCGGAGTGGAAAATTGTATTGAATAAATTATTGGACAGTGCTACATCATATCCTGGTCTAATTACAACGATGTGTAGACTTACTTATGACTTTTTAACTGACCCAGAGAAAGATTTATTCTATAACATAGCTTATATTTATGAGGACCAAAGTAAACATGATGTTACACAATTGTTAAAAGGATCGAGATTTCCTTTGGAAATAGGAATGAATGTACTCATTGAGCGAAACCTTGTAAAGGTCGTGAATGACAAGTTTTATGTTCATGATTTATTGCGGGAGGAATGGGGAGCCTATAGCTATGGTAAAAGACAGAAGCTCAAATATAGCTATGATGTATTTTTGAGTTTTAGAGGTGAAGATACACGTAAATCTTTTACTACTCATCTTTGCACTGCTCTAAAGCAAGCAGGTATTGAGGTCTACATGGATGAAGAACGAATTGAAGGGGGAGATAATATTTCTTCTTCGTTACTGGAAGCCATTGAAAGTTCTAGAATTTCAATAATTATATTCTCAAAAAATTATGCTGGTTCTAGTTGGTGCTTGCAAGAATTACAAAAAATCATGGAGTGTTACAAAACATCTTATCAAGAGGTATTGCCTATCTTTTACGATGTTCGGCCATTTGAAGTTCGTAAACAACAAAATGCTTTTGGAAAAACATGGGAAAAACTTGTCAACAGAACATCAAGCAGCAAAGTGAATGAATTGACAACCAAGAGAGCCCTTGCAGAGGCTGCCAACTTTTCTGGTTGGGACATGCAAACCTACAGAACTGAAACCGAGTTGATTGACCACGTTGTTGAAACTATTACAATGAAGTTAGGCGACAGCAAATGCTTGTTTGTTGCTCACCATCCTGTTGGATTAAAGCCTCGTATGCACGATATCATCCAATTGCTAAGAAGTAAATCAAATGAAGTTGTCATAGTAGGGATTTGGGGAATGGGGGGAATTGGCAAGACAACAATTGCTAAAGCCATCTACAATGAAGTTGGTCAAAGGTTTGAGGGAAAGTGTTTCCTTGCAAATGTTAGGGAATTATGGAAGCAAGATAATGGTCAAGCTTATTTGCAAGAACAACTTCTTTCAAGCATCTTAAAAGCAAGAAGGAAGACGCTACCAAATATAGAAATGGGAAAAACTTTGCTCAAGGAAATGCTTTGCAAGAAAAGAGCTTTTGTTGTACTTGATGATGTGAACAATGAAGATCAACTTAAAGCATTATGTGGAAGCCGAGAATGGTTTGGCCAAGGTAGTAGAATAATTATCACTACTAGAGATGAACATTTACTTAAGATCCTTAAAGTGATTCATGTATACAATGTGAAAGAAATGGACGACAATGAATCACTTGAGCTTTTTAGTTGGCATGCATTTAAGCAAGAGATTCCAGAAAAGGATTTTGCTACGCTTTCAAGAAGCATAGTCTCTTACTCTGGAGGGTTGCCCCTTGCTCTTGAAATTCTTGGCTCCTATTTATTTGATAGAGAAGCATTTATTTGGAAAAGCGTTTTGGAGAAATTACAAAAAATTCCCAATGATCAAATACATGAAAAGCTAAAAATAAGTTATGATGGTTTGAGTGACAATATGGAGAAAGATATATTCCTTGACATAAGTTGTTTCTTTGTTGGTATGGATAAAAGCTATGCAACACAAATATTAAACGGTTGTGGACTTCATGCAGAAATTGGAATTACTCGTCTAATCGAGCTAAGCCTTGTAAAAGTTGGCAACAAAAATAAGCTTGATATGCATGACTTACTACGTGACATGGGAAGGGAAATCATTCGTGTGCAATCACCAGAGGATCCTGAGAAGCGTACTAGATTATGGTTTTATGATGATGTTGTTGATGTGTTGAGAAATAACAATGGAACGATGGCCATCAAGGGATTGGCTTTAAACATGTCAAGGAACAATTCATTATCCTTCAGTACGAAAGCATTTAAGAAGATGAAGAGACTTCGTTTGCTACAACTCGATCATGTACAACTTGCAGGAGACTATGGTTATCTATCAACAGAACTGAGATGGCTTCGATGGCATGGACTTCCCTTAAAAAACTTGCCAATGGACTTATGTCTAGAAAAGACAGTTGTCATAGACTTAAAGTGGAGTAATCTTACTGAAGTATGGGAGAAAAGCCAGTTGCTGGAGTGGCTGAAAATTCTCAATTTGAGTCATTCTTATTACTTGAAAGAAACACCCAACTTTTCAAAGCTACCATATCTTGAAGAGTTAATACTCAAAGATTGTCCACGTTTGTCTGCAGTTCATCATTCCATTGGTGATCTTAAATATATTATTCTGTTAAATTTAAAGGACTGCAAGAGCATCAACCATCTCCCTGTAGGCACATATAGCTTGAAATCTTTGAAGACCCTTAATCTTTCTGGCTGTTCAAAGATTGAAAAGCTTGAAGAAGACATGGAGCAAATGGAATCTTTGACAACATTGGTGGCAAATCGAACTGCTATAGCACGAGTGCCCTTCTCATTAGTAAAATTGAAAAGCATTAAATATGTGTCTTTGTGTGGCTATGAAGGATTATCTCGTGATGTATTTCCATCTCTTGTTTTGTCTTGGATGTCACCAACCTGTTACTCAAAGTCCTTGTTCCGAGCATCTCAGATCATGCCATCTTTGATCAGGTGTTTATCACATCCTTTATTCACTAAAAGCATTGAGAAATTAGGAGCAAGACAAAGTACATCTGGAGCTTATTGTCAAAAAACTCCAAAATTAGTTGAATTTCCTGAGCAAGTTCACACAGATAGGTCAACAGCATGTATGAGTTCTTTGACAATGCACGTAGGTGGGTCCAACAAAGTTGTGGATACACTTCTAAAGAGTATTTCAAAGGGATGGAGTGATGGAGGGCTTGAATATTCTCTTCCGAGAGATAATTATCCTAATTGGCTAGTTTTAGAAAATGATGGGTTTTCAGTATCATTTAAAGCTCCCCAAGTTGCTGGTCATTTCTTAAAAGGAATGGTCCTCTACATTACCTATTCATGTCTTCAAGATAGCATTGGATCTGTGTATCCTATTGGTGTTGTTTTAAAGAATTTCACAAAAGCTACCTTGAATTTCTACAAGCGAGATGCTACGTCTTTTTCTACTGATGAAGAATGGCAGAACATAATATCTAATTTGGAGCCTGGAAATGAGGTGGAAGTTGAAGTTAAGTTTGCAAATAAATATGTTGTGAAGAAGACTGCAATCTATCTTGTATATGATGGAGAAGTTAACAAGCTGAGCATCACTGAATAA 3996 0.3654 MATLCLLILDQSCLHMFHNVMFEDRPYHQVGLSLRMRKLLDFLGWQYIMMKDLFMVEIWGPAGIGKTTIAKEFYDRVGGNFEGKIFLQNQTDKHQFIKDVRQQLCSDTSGVEIEANDVLLTCMSPRKRVLIIFDDVDDTDVDDYICHVLRKSRKLFGKGSLIFLIARQMSPSIGFVDSSYEMKVLDSHESLKLFSLYAFKKFPPAKGFENLSKKVVSKCFGLPLVLEIIGSLLHKRTIPEWKIVLNKLLDSATSYPGLITTMCRLTYDFLTDPEKDLFYNIAYIYEDQSKHDVTQLLKGSRFPLEIGMNVLIERNLVKVVNDKFYVHDLLREEWGAYSYGKRQKLKYSYDVFLSFRGEDTRKSFTTHLCTALKQAGIEVYMDEERIEGGDNISSSLLEAIESSRISIIIFSKNYAGSSWCLQELQKIMECYKTSYQEVLPIFYDVRPFEVRKQQNAFGKTWEKLVNRTSSSKVNELTTKRALAEAANFSGWDMQTYRTETELIDHVVETITMKLGDSKCLFVAHHPVGLKPRMHDIIQLLRSKSNEVVIVGIWGMGGIGKTTIAKAIYNEVGQRFEGKCFLANVRELWKQDNGQAYLQEQLLSSILKARRKTLPNIEMGKTLLKEMLCKKRAFVVLDDVNNEDQLKALCGSREWFGQGSRIIITTRDEHLLKILKVIHVYNVKEMDDNESLELFSWHAFKQEIPEKDFATLSRSIVSYSGGLPLALEILGSYLFDREAFIWKSVLEKLQKIPNDQIHEKLKISYDGLSDNMEKDIFLDISCFFVGMDKSYATQILNGCGLHAEIGITRLIELSLVKVGNKNKLDMHDLLRDMGREIIRVQSPEDPEKRTRLWFYDDVVDVLRNNNGTMAIKGLALNMSRNNSLSFSTKAFKKMKRLRLLQLDHVQLAGDYGYLSTELRWLRWHGLPLKNLPMDLCLEKTVVIDLKWSNLTEVWEKSQLLEWLKILNLSHSYYLKETPNFSKLPYLEELILKDCPRLSAVHHSIGDLKYIILLNLKDCKSINHLPVGTYSLKSLKTLNLSGCSKIEKLEEDMEQMESLTTLVANRTAIARVPFSLVKLKSIKYVSLCGYEGLSRDVFPSLVLSWMSPTCYSKSLFRASQIMPSLIRCLSHPLFTKSIEKLGARQSTSGAYCQKTPKLVEFPEQVHTDRSTACMSSLTMHVGGSNKVVDTLLKSISKGWSDGGLEYSLPRDNYPNWLVLENDGFSVSFKAPQVAGHFLKGMVLYITYSCLQDSIGSVYPIGVVLKNFTKATLNFYKRDATSFSTDEEWQNIISNLEPGNEVEVEVKFANKYVVKKTAIYLVYDGEVNKLSITE 1331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0687 1331 Pfam TIR domain 349 514 IPR000157 GO:0007165
Prci12g0687 1331 Gene3D - 684 768 IPR042197 -
Prci12g0687 1331 Gene3D - 184 270 IPR042197 -
Prci12g0687 1331 Gene3D - 346 518 IPR035897 -
Prci12g0687 1331 SUPERFAMILY "Winged helix" DNA-binding domain 755 861 IPR036390 -
Prci12g0687 1331 FunFam Disease resistance protein (TIR-NBS-LRR class) 345 516 - -
Prci12g0687 1331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 779 IPR027417 -
Prci12g0687 1331 Gene3D Ribonuclease Inhibitor 860 1103 IPR032675 -
Prci12g0687 1331 SMART AAA_5 52 188 IPR003593 GO:0016887
Prci12g0687 1331 SMART AAA_5 546 683 IPR003593 GO:0016887
Prci12g0687 1331 Pfam NB-ARC domain 535 760 IPR002182 GO:0043531
Prci12g0687 1331 Pfam NB-ARC domain 52 251 IPR002182 GO:0043531
Prci12g0687 1331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 280 IPR027417 -
Prci12g0687 1331 SUPERFAMILY Toll/Interleukin receptor TIR domain 339 464 IPR035897 -
Prci12g0687 1331 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 349 1091 IPR044974 GO:0006952
Prci12g0687 1331 Coils Coil 1044 1064 - -
Prci12g0687 1331 ProSiteProfiles TIR domain profile. 347 514 IPR000157 GO:0007165
Prci12g0687 1331 SUPERFAMILY L domain-like 874 1102 - -
Prci12g0687 1331 Gene3D - 519 679 IPR027417 -
Prci12g0687 1331 Gene3D - 33 170 IPR027417 -
Prci12g0687 1331 PRINTS Disease resistance protein signature 549 564 - -
Prci12g0687 1331 PRINTS Disease resistance protein signature 1028 1044 - -
Prci12g0687 1331 PRINTS Disease resistance protein signature 719 733 - -
Prci12g0687 1331 PRINTS Disease resistance protein signature 626 640 - -
Prci12g0687 1331 SMART till_3 348 488 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci12g0687 Prci-Chr12 6567221 6582475 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0687 30 319 WRKY Transcription Factor Family AT4G12020 27.632 2.31e-19 93.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0687 - - pcin:129288830 1694.86