Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0680 ATGTCTTGCTTTGCTTCTTCATCCTCCACTGTCGCATCGGATTTGGTTTACGATGTCTTCTTAACTGTGAGTGATCCCGATCATCCTGCAAAAGCTGAATTAAGAAACTATTTCAGGGATCTTCAAATCAAAACTTTGATTGATGATCAGAAGGGGGTGTTTTCGATAACTGAGATAGCAAGGTTCAGAATGGTTGTGGTTGTTTTCACACCAGGTTTCGTGGAGTCCGATGTATTCCTCAAGGGACTGATGAATATAAGGAGGAGCCAAAAGATCATGAATACAAAAGTGTTGCCTGTATTCTGTGGAGTGAGCGAGGAGCAGGTACGTGAGCAGTTGGAGGGTATGGATTTGAGAAGATCAGAATCGTGGCATTTGGATTTCGATTTGGAATCGAGAAAAGCCAATACTGAAGCCGCGTTGCTTTTAGATTCGAGAAAAGCCATCGTTGAAGCTGCTTCCTCACATGGCTACACTCTGTCTTCTGATTTTGGGGATAAAATCAGTAACGGTATTGCAGATCAATCATGTCTACACATGTTCCACAATGTTATGTTTGAGGATCGTCCATATCATCAAGTAGGGTTATCGCTTCGTATGAGAAAATTGCTTGATTTTTTGGGGTGGCAATACATTATGATGAAAGATTTGTTCATGGTCGAAATTTGGGGCCCTGCAGGTATTGGTAAAACTACAATTGCCAAAGAATTTTATGATAGAGTTGGTGGCAATTTTGAAGGGAAGATTTTCTTGCAAAATCAAACCGATAAGCATCAATTTATAAAAGATGTTAGGCAACAACTTTGTTCAGATACTTCTGGAGTTGAAATAGAGGCAAATGATGTCTTATTGACATGCATGTCACCCCGTAAAAGAGTCCTAATAATATTTGATGATGTAGATGATACTGATGTTGATGATTATATTTGCCATGTATTGCGTAAAAGTAGAAAGTTGTTTGGTAAAGGGAGTTTGATATTCCTTATAGCAAGACAGATGTCTCCCTCTATCGGCTTTGTTGACTCATCGTATGAAATGAAAGTGTTAGACAGTCATGAGTCTCTTAAGCTGTTCAGTTTGTACGCATTTAAGAAATTTCCTCCAGCGAAGGGTTTTGAGAATCTTTCAAAGAAAGTCGTTTCTAAATGTTTTGGCCTACCATTGGTTCTTGAAATAATTGGCTCTCTTTTGCATAAAAGGACAATACCGGAGTGGAAAATTGTATTGAATAAATTATTGGACAGTGCTACATCATATCCTGGTCTAATTACAACGATGTGTAGACTTACTTATGACTTTTTAACTGACCCAGAGAAAGATTTATTCTATAACATAGCTTATATTTATGAGGACCAAAGTAAACATGATGTTACACAATTGTTAAAAGGATCGAGATTTCCTTTGGAAATAGGAATGAATGTACTCATTGAGCGAAACCTTGTAAAGGTCGTGAATGACAAGTTTTATGTTCATGATTTATTGCGGGAGGAATGGGGAGCCTATAGCTATGGTAAAAGACAGAAGCTCAAATATAGCTATGATGTATTTTTGAGTTTTAGAGGTGAAGATACACGTAAATCTTTTACTACTCATCTTTGCACTGCTCTAAAGCAAGCAGGTATTGAGGTCTACATGGATGAAGAACGAATTGAAGGGGGAGATAATATTTCTTCTTCGTTACTGGAAGCCATTGAAAGTTCTAGAATTTCAATAATTATATTCTCAAAAAATTATGCTGGTTCTAGTTGGTGCTTGCAAGAATTACAAAAAATCATGGAGTGTTACAAAACATCTTATCAAGAGGTATTGCCTATCTTTTACGATGTTCGGCCATTTGAAGTTCGTAAACAACAAAATGCTTTTGGAAAAACATGGGAAAAACTTGTCAACAGAACATCAAGCAGCAAAGTGAATGAATTGACAACCAAGAGAGCCCTTGCAGAGGCTGCCAACTTTTCTGGTTGGGACATGCAAACCTACAGAACTGAAACCGAGTTGATTGACCACGTTGTTGAAACTATTACAATGAAGTTAGGCGACAGCAAATGCTTGTTTGTTGCTCACCATCCTGTTGGATTAAAGCCTCGTATGCACGATATCATCCAATTGCTAAGAAGTAAATCAAATGAAGTTGTCATAGTAGGGATTTGGGGAATGGGGGGAATTGGCAAGACAACAATTGCTAAAGCCATCTACAATGAAGTTGGTCAAAGGTTTGAGGGAAAGTGTTTCCTTGCAAATGTTAGGGAATTATGGAAGCAAGATAATGGTCAAGCTTATTTGCAAGAACAACTTCTTTCAAGCATCTTAAAAGCAAGAAGGAAGACGCTACCAAATATAGAAATGGGAAAAACTTTGCTCAAGGAAATGCTTTGCAAGAAAAGAGCTTTTGTTGTACTTGATGATGTGAACAATGAAGATCAACTTAAAGCATTATGTGGAAGCCGAGAATGGTTTGGCCAAGAAATTGGAATTACTCGTCTAATCGAGCTAAGCCTTGTAAAAGTTGGCAACAAAAATAAGCTTGATATGCATGACTTACTACGTGACATGGGAAGGGAAATCATTCGTGTGCAATCACCAGAGGATCCTGAGAAGCGTACTAGATTATGGTTTTATGATGATGTTGTTGATGTGTTGAGAAATAACAATGGAACGATGGCCATCAAGGGATTGGCTTTAAACATGTCAAGGAACAATTCATTATCCTTCAGTACGAAAGCATTTAAGAAGATGAAGAGACTTCGTTTGCTACAACTCGATCATGTACAACTTGCAGGAGACTATGGTTATCTATCAACAGAACTGAGATGGCTTCGATGGCATGGACTTCCCTTAAAAAACTTGCCAATGGACTTATGTCTAGAAAAGACAGTTGTCATAGACTTAAAGTGGAGTAATCTTACTGAAGTATGGGAGAAAAGCCAGTTGCTGGAGTGGCTGAAAATTCTCAATTTGAGTCATTCTTATTACTTGAAAGAAACACCCAACTTTTCAAAGCTACCATATCTTGAAGAGTTAATACTCAAAGATTGTCCACGTTTGTCTGCAGTTCATCATTCCATTGGTGATCTTAAATATATTATTCTGTTAAATTTAAAGGACTGCAAGAGCATCAACCATCTCCCTGTAGGCACATATAGCTTGAAATCTTTGAAGACCCTTAATCTTTCTGGCTGTTCAAAGATTGAAAAGCTTGAAGAAGACATGGAGCAAATGGAATCTTTGACAACATTGGTGGCAAATCGAACTGCTATAGCACGAGTGCCCTTCTCATTAGTAAAATTGAAAAGCATTAAATATGTGTCTTTGTGTGGCTATGAAGGATTATCTCGTGATGTATTTCCATCTCTTGTTTTGTCTTGGATGTCACCAACCTGTTACTCAAAGTCCTTGTTCCGAGCATCTCAGATCATGCCATCTTTGATCAGGTGTTTATCACATCCTTTATTCACTAAAAGCATTGAGAAATTAGGAGCAAGACAAAGTACATCTGGAGCTTATTGTCAAAAAACTCCAAAATTAGTTGAATTTCCTGAGCAAGTTCACACAGATAGGTCAACAGCATGTATGAGTTCTTTGACAATGCACGTAGGTGGGTCCAACAAAGTTGTGGATACACTTCTAAAGAGTATTTCAAAGGGATGGAGTGATGGAGGGCTTGAATATTCTCTTCCGAGAGATAATTATCCTAATTGGCTAGTTTTAGAAAATGATGGGTTTTCAGTATCATTTAAAGCTCCCCAAGTTGCTGGTCATTTCTTAAAAGGAATGGTCCTCTACATTACCTATTCATGTCTTCAAGATAGCATTGGATCTGTGTATCCTATTGGTGTTGTTTTAAAGAATTTCACAAAAGCTACCTTGAATTTCTACAAGCGAGATGCTACGTCTTTTTCTACTGATGAAGAATGGCAGAACATAATATCTAATTTGGAGCCTGGAAATGAGGTGGAAGTTGAAGTTAAGTTTGCAAATAAATATGTTGTGAAGAAGACTGCAATCTATCTTGTATATGATGGAGAAGTTAACAAGCTGAGCATCACTGAATAA 4053 0.3763 MSCFASSSSTVASDLVYDVFLTVSDPDHPAKAELRNYFRDLQIKTLIDDQKGVFSITEIARFRMVVVVFTPGFVESDVFLKGLMNIRRSQKIMNTKVLPVFCGVSEEQVREQLEGMDLRRSESWHLDFDLESRKANTEAALLLDSRKAIVEAASSHGYTLSSDFGDKISNGIADQSCLHMFHNVMFEDRPYHQVGLSLRMRKLLDFLGWQYIMMKDLFMVEIWGPAGIGKTTIAKEFYDRVGGNFEGKIFLQNQTDKHQFIKDVRQQLCSDTSGVEIEANDVLLTCMSPRKRVLIIFDDVDDTDVDDYICHVLRKSRKLFGKGSLIFLIARQMSPSIGFVDSSYEMKVLDSHESLKLFSLYAFKKFPPAKGFENLSKKVVSKCFGLPLVLEIIGSLLHKRTIPEWKIVLNKLLDSATSYPGLITTMCRLTYDFLTDPEKDLFYNIAYIYEDQSKHDVTQLLKGSRFPLEIGMNVLIERNLVKVVNDKFYVHDLLREEWGAYSYGKRQKLKYSYDVFLSFRGEDTRKSFTTHLCTALKQAGIEVYMDEERIEGGDNISSSLLEAIESSRISIIIFSKNYAGSSWCLQELQKIMECYKTSYQEVLPIFYDVRPFEVRKQQNAFGKTWEKLVNRTSSSKVNELTTKRALAEAANFSGWDMQTYRTETELIDHVVETITMKLGDSKCLFVAHHPVGLKPRMHDIIQLLRSKSNEVVIVGIWGMGGIGKTTIAKAIYNEVGQRFEGKCFLANVRELWKQDNGQAYLQEQLLSSILKARRKTLPNIEMGKTLLKEMLCKKRAFVVLDDVNNEDQLKALCGSREWFGQEIGITRLIELSLVKVGNKNKLDMHDLLRDMGREIIRVQSPEDPEKRTRLWFYDDVVDVLRNNNGTMAIKGLALNMSRNNSLSFSTKAFKKMKRLRLLQLDHVQLAGDYGYLSTELRWLRWHGLPLKNLPMDLCLEKTVVIDLKWSNLTEVWEKSQLLEWLKILNLSHSYYLKETPNFSKLPYLEELILKDCPRLSAVHHSIGDLKYIILLNLKDCKSINHLPVGTYSLKSLKTLNLSGCSKIEKLEEDMEQMESLTTLVANRTAIARVPFSLVKLKSIKYVSLCGYEGLSRDVFPSLVLSWMSPTCYSKSLFRASQIMPSLIRCLSHPLFTKSIEKLGARQSTSGAYCQKTPKLVEFPEQVHTDRSTACMSSLTMHVGGSNKVVDTLLKSISKGWSDGGLEYSLPRDNYPNWLVLENDGFSVSFKAPQVAGHFLKGMVLYITYSCLQDSIGSVYPIGVVLKNFTKATLNFYKRDATSFSTDEEWQNIISNLEPGNEVEVEVKFANKYVVKKTAIYLVYDGEVNKLSITE 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0680 1350 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 123 IPR035897 -
Prci12g0680 1350 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 513 821 IPR044974 GO:0006952
Prci12g0680 1350 SMART AAA_5 216 352 IPR003593 GO:0016887
Prci12g0680 1350 SMART AAA_5 710 862 IPR003593 GO:0016887
Prci12g0680 1350 SMART till_3 512 652 IPR000157 GO:0007165
Prci12g0680 1350 Pfam TIR domain 513 678 IPR000157 GO:0007165
Prci12g0680 1350 Gene3D - 348 434 IPR042197 -
Prci12g0680 1350 SUPERFAMILY Toll/Interleukin receptor TIR domain 503 628 IPR035897 -
Prci12g0680 1350 ProSiteProfiles TIR domain profile. 511 678 IPR000157 GO:0007165
Prci12g0680 1350 Coils Coil 1063 1083 - -
Prci12g0680 1350 FunFam Disease resistance protein (TIR-NBS-LRR class) 509 680 - -
Prci12g0680 1350 Gene3D - 197 334 IPR027417 -
Prci12g0680 1350 Gene3D - 683 829 IPR027417 -
Prci12g0680 1350 SUPERFAMILY L domain-like 893 1121 - -
Prci12g0680 1350 Gene3D Ribonuclease Inhibitor 884 1183 IPR032675 -
Prci12g0680 1350 PRINTS Disease resistance protein signature 1023 1039 - -
Prci12g0680 1350 PRINTS Disease resistance protein signature 219 234 - -
Prci12g0680 1350 PRINTS Disease resistance protein signature 287 301 - -
Prci12g0680 1350 PRINTS Disease resistance protein signature 383 397 - -
Prci12g0680 1350 Gene3D - 12 176 IPR035897 -
Prci12g0680 1350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 686 830 IPR027417 -
Prci12g0680 1350 Pfam NB-ARC domain 216 415 IPR002182 GO:0043531
Prci12g0680 1350 Pfam NB-ARC domain 699 813 IPR002182 GO:0043531
Prci12g0680 1350 Gene3D - 510 682 IPR035897 -
Prci12g0680 1350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 444 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0680 Prci-Chr12 6567221 6582863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0680 513 820 WRKY Transcription Factor Family AT4G12020 27.331 1.43e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0680 - - pcin:129288830 790.03