Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0678 ATGAAGCTAGGTGACAACAAGTGCTTATTTGTTGCTCACCATCCAGTTGGATTAGAGTCTCGAGTGCAATTTGCCACCAAATTGCTAAGTAGTGAACCAAATGAGATTATCATATCTGGGATTTTGGGGATGGGAGGAATTGGCAAGACAACCATTGCTAAAGCCATCTATAATGAAATTGGTCAAACATTTGAGGGAAAGATTTTCCTAGCTAATATTAGGGAAGTTTGGAGGCAAGATAATGGTCAAGTTTACTTGCAGGAACAACTTCTTTCAAGCATCATGAAAACAAGAAGGATGACACCAACAAATATTGAAATGGGGAAAGCTCTAATCAAGGAAATGCTTTGTCATAGAAAGGTTCTTGTTGTTCTTGATTATGTGAATAGTGAAGACCAACTCAAGGCTTTATGTGGAAGTCAAGAGTGGTTTGATCAAGGAAGTAGAATAATCATCACTACTAGGGACGAGCATTTACTTAAGATTGTTTCAGTGAATCACATATATGATATGAAAGAATTAGATGTTGAAGAATCTCTTGAACTTTTCAGTTGTCATGCATTTAAGCAAGCAATCCCTAAACAAGATTTCAATGAACTTTCAAGAAGAGTGGTATCTTACTTCGGTTGGTTACCACTGGCTCTTGAAATACATATTTGGAGAAGTGTTTTGGAAAAATTGCAAAAAATTCCAAATGATCAAATACAGGCAAAGCTAAAAATAAGTTATGATGGTTTGAGTGACAATAGTGAGAAAGATATATTCCTTGACATATGTTGTTTTTTCATTAGGAAAGACAAAAGCTATGCTACTCAAATATTAAATGGTTGTGGATTTTATGCAGAAATTGGAATCAATCGTTTGATAGAGCGTAGTCTTATAAAAGTTGGCAATAGAAATAAACTCGACATGCATGACTTGCTATGTGATACAGAAGAGAAATCATTTGTGAGCAGTCACCAGAAAAGCATGGCAAGCATACTAGATTATGGAATCAAGATGACACGCTAG 1011 0.3551 MKLGDNKCLFVAHHPVGLESRVQFATKLLSSEPNEIIISGILGMGGIGKTTIAKAIYNEIGQTFEGKIFLANIREVWRQDNGQVYLQEQLLSSIMKTRRMTPTNIEMGKALIKEMLCHRKVLVVLDYVNSEDQLKALCGSQEWFDQGSRIIITTRDEHLLKIVSVNHIYDMKELDVEESLELFSCHAFKQAIPKQDFNELSRRVVSYFGWLPLALEIHIWRSVLEKLQKIPNDQIQAKLKISYDGLSDNSEKDIFLDICCFFIRKDKSYATQILNGCGFYAEIGINRLIERSLIKVGNRNKLDMHDLLCDTEEKSFVSSHQKSMASILDYGIKMTR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0678 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 258 IPR027417 -
Prci12g0678 336 PRINTS Disease resistance protein signature 38 53 - -
Prci12g0678 336 PRINTS Disease resistance protein signature 115 129 - -
Prci12g0678 336 Pfam NB-ARC domain 25 217 IPR002182 GO:0043531
Prci12g0678 336 Gene3D - 173 247 IPR042197 -
Prci12g0678 336 CDD ABC_ATPase 32 173 - -
Prci12g0678 336 SUPERFAMILY "Winged helix" DNA-binding domain 234 308 IPR036390 -
Prci12g0678 336 Gene3D - 11 168 IPR027417 -
Prci12g0678 336 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 313 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0678 Prci-Chr12 6510236 6511246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0678 16 310 WRKY Transcription Factor Family AT5G45050 32.899 4.21e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0678 - - pcin:129289027 660.603