Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0677 ATGCTATCGGCACTTTTGCAGTTAAACATGTCTTATTTCCCTTCTGCTTCATCCTCTAGTTCGGAAAGCACTTTTGACTACGACGTGTTCTTAACTATCAGCCACCCCAAACATCATGAGAAAACCTACTTCGAAAAAAACTTAAGAGATGTTGGAATCAGAACTTTGATTGATGATCAGAGGGAGGAGTTTTCCATGCATGAGATAGTAAAGTGCAGAATGGTTGTGGTTGTTTTCACACCAGACTTCGTTGAATCCGACGTATTTCTGGCGAGACTGATGAATATAAGGCGGTGCCAAAAACTGACGAACAAAGAAGTGTTGCCTCTGTTCTGTGGAGTGAGTGAGGAGCAAGTACGTGAGCAGTTTGAGGATATGGATCAGAGAAGATTAGATGCTTGGGATTTGGATTTCGATTTGGATTTTGGAGGATTTCCAGCTGAAGCTGCTTCGCTTTTGGATTCAGGAAGAGCCACCGCTGAAGCTGCTTCGTTATCTGGCTTTACTCTGTTGTCTGATTTGGGGAATAAAATCAGCAACATTATTGCGAATTTATACAAATACTTGTTTCATGAAGACTTGTTTCACGATCTTCAATACCATCAAGCAGGGTTACGACTTCGTGTAAGAGAATTGCTTGATATTTTGCGACAAAAATATATTGCTTCAGGAGATACGATCATAGTTGGAATCTGGGGTGTTGGAGGTATTGGTAAAACTACGATTGCGAAAGCTTTTTATGATAAAATTGGTGGTGATTTTGAGGGTAAAAGTTTCCTTACAAATATCAAGGATGTATGGGATAAGCGTAATGGTAGAGTTCTTAAAAAGCAGCTTATTTCAGATATTTCTGAAGTTGAACTCGATGAGAAAAGTGATGTCCTAGTGATACATGAACAAATGAAGCAAATACTCCATGGAAAAAGAGTCCTAGTAGTACTTGATAACGTAGATAGTGGATTCCAGCTCATGGAACTGTGTGGGAATATCAAGTGGTTTGGTAGAGGGAGTTTGATATTCATTACAGCAAGAAATGAGGATATCTTTAAAAACTTTGTTGATGTATCATATGAAATGAAAAGGTTAGATAGTGATGAGTCTATTAAGCTTTTCAACTGGCATGCATTTAAGAAATCTACTCCAACAAATGATTTTGAGTATCTTTCATCCACAATCATTACTTTTTGTGAAGGACTACCATTGCTTCATGAAGTTATTGGCTCTCTTTTACATAATAGGACATTACAAGAGTGGCAAGGTGTATTGAATGAATTGGGTAGGACTTCTTATGGTCAAATAAAAACAAAGCTCTACATTAGCATTGATTTTTTAACTGGTTCAGAGAAAGATTTGTTCTTTAATATAGCTTGTTTTTATGTGGGTCAGAGCAAAAACTATGTTATACAGTTGTTAAAAGGATCAAGATTTCCTGTGAAAATGGGAATGCCCGTAATCATTGAGCGTAACCTTGTAAAGGTCATGAATGACAAGCTTTATGTTCATGATTTGCTGCAAGAGATAGTAAGAAGCCATCGTGACAAGCCACTGTTCAAATATAGTTATGATGTATTCTTAAGTTTTAGAGGTGATGATACACGAAAATCCTTTGCTACTCATCTTTGCTCTGCTATAAAGCAAGCAGGTATTGACATCTACATGGATGAAGAACGAATTGAAAGAGGAAAAAACATTTCATCTTCACTACTGCAAGCAATTGAAAGTTCCAAAATTTCAATAATTATACTATCAAAGAATTATGCTGGCTCTAGTTGGTGTTTGCAAGAATTAGAGAAAATCATGGAATGTTACCGAACAACTTATCAAGAGGTTTTACCTATATTTTTTGATGTGCGACCATCTGAAGTTTGAAAACAAACAAATTCTTTTGGAAGAGCATGGGATAGACTTATCAAGAGAAATTCAAGCAATGAAGTGGAGACATGGACAATTAATTCACGGAGAGCCCTCATAGAAGTTGCCAACTTATCCGGATGGGACATGCAGAACTACAGAACTGAAACTGAGCTGATTGATGAAGTCATTGAAACTATTACAAAGAAGTTGGGTGACAACAAATGCCTATTTGTAGCTCATCATCCAGTGGGATTGAAGTCTCGTATGCAAGATATCCTCCAATTGCTAAGAAGTAAATCAAAAGATGTTATCATTGCAGGGATTTGGGGGATGGGGGGGATTGGTAAGACAACGATTGCTAAAGCTATCTACAATCAAGTTGGTCAAAGTTTTGAAGGGAAGTGTTTCCTTGCAAATGTTAGGGAAGTATGGAAGCAACATAATGGCCAAGTTTATTTGCAAGAACAACTTCTTTCAGACATTCTAAGAGCAAGAAGGTGGGCTTTACCAAATGTAGAAATGGGGAAAACCCTACTGGAGGAAATGCTTTGTAAGAAAAGAGTACTTGTTGTACTTGATGATGTGAACAATGAAGACCAACTTAAAGCATTATGTGGAAGTCGAGAATGGTTTGGCCAAGGTAGTAGAGTAATCATTACAACTAGAGATCAACGTTTGCTTAAGATCCTTAGAGTATTTCATGTCTACAACATGAAAGAGTTGGATGATAATGAATCTCTTGAACTTTTCAGTTGGCATGCATTTAAGCAAGCGATCCCTGAACAAGAAGACTTCATTGAACTTTCAAGAAGGGTAGTTTCTTATTCTGGAGGTTTGCCACTAGCTCTTGAAATTCTTGGCTCCTACCTGTTTGATAGAGAGATACTTATTTGGAAAATAGTTTTGGAAAAATTACAACGAATTCCAAACGATCAAATACAAGAAAAACTGAAAATAAGTTATGATGGTTTGAGTGACCATATAGAGAAGGATGTGTTCCTTGATATATGTTGTTTTTTGGTTGGCAAGGACAAAAGTTATGCTACACAAATATTAAATGGTTGTGGATTTCATGCGGAAATTGGAATTAATCGTTTGATAGAGTTGAGTCTTGTAAAGGTTGGCAACAAAAACAAACTTGATATGCATGACTTATTACGTGACATGGGAAGGGAAATAATTCGTGAGCAATCACCAGAGGAGCCTGAGAACCGTACGAGATTATGGTTTTATGATGATGTAATGGATGTGTTGACAAATACCACTGGAACGATGGCTATCAAGGGACTAGCTTTGAATAAGTCAAATAATAATTCAGTTTCTTTGAGTGCAAAAGCATTTAAGGGGATGAAGAGGCTTCGTTTGCTACAACTTAATCATGCACAACTTACTGGAGACTATAATTATCTATCAACAAAATTGAGATGGCTTTGTTGGCATGGATTTCCCTTAGAGAACATGCCAATCAACTTATGTCTAAAAGAAATAGTTGCCATTGACTTAAAGTGGAGCAGTCTAAAAAAAGTATGGGAGAAATACCAGTTGTTGGAGAGGTTGAAAATTCTCATTCTGAGTCATTCTCATTACTTGACGGCGACACCAAAATTTACAAAGTTACCATATCTTGAAAAGTTAATACTCAAAGATTGTCCACGTTTGTCTATAATTCATCCTTCAATTGGTGATCTTAAATATATTATTCTGTTAAATCTGAAGGATTGCAAAAGCCTCAAAAACCTCCCAAGAAGTGTATATAAGTTGAAATCCTTGAAGACCCTTAATCTTTGTGGTTGCTCAAAAATTGAAAAGTTAGAAGAAGACATTGAGCAAATGGAATCTTTGTCAACTTTGGTGGCAAATCAAACTGCTATAGTACAAGTTCCATTCTCATTAGTGAGACTGAAAAGCATTAAATATGTGTCTCTATGTGGCTATGAAGGATTATCTCGTGATGTATTTCCATCTCTTGTTCTGTCTTGGATGTCACCAACTCATCGTTCAAGGTCCTTATTCCAAACATTTCAGATTTTACCATCTCTAATTAGGAGCATGTCACATCCTTTATTTGTTAAAAGCAATGAAAGTGTGGAACCAAGGCCAAGCACAGATGAAGCTTCATGTCGAAAATCTCCAACATTAATTGAATTTCATGAACAAGTTCCCATTAAAAGATTAGAAACATTTACGAGTACTCTGACAATTCATGTTGGCAGTTTCAACAAAGTTGCTGATACACTTTTAAAGAGTATTTCACAGGGATGGCATGATGGTGGGGTTGATTTGTCTATTCCAATAGACAATTATCCAGATTGGCTAGTTTTTGTAAGTGAAGGACCTTCAGTATCATTTAGAGTTCCTCAAGTTGTTGGCCGTCGCTTAAAAGGAGTGGTCCTCTACATCATCTATTCATCTTTTCAAGTTAGCATGACATCTGTATATCCCATTGGTCTTATGATAAAGAATTTCACCAAAGCTACTATGGATTTCTACAAGCAGGATGCTGGAACAACTTTTACGGATAAAGAATGGCAAAACATAGCATCTAATTTGGAGCCTGGAGATGAGATGAAAGTTAAAGTTGAATTTGCACATAGGTATAATGTGAAGAAGACTTCAATCTATCTTATATATGCTGAGAAACTAATGAGCTGA 4506 0.366 MLSALLQLNMSYFPSASSSSSESTFDYDVFLTISHPKHHEKTYFEKNLRDVGIRTLIDDQREEFSMHEIVKCRMVVVVFTPDFVESDVFLARLMNIRRCQKLTNKEVLPLFCGVSEEQVREQFEDMDQRRLDAWDLDFDLDFGGFPAEAASLLDSGRATAEAASLSGFTLLSDLGNKISNIIANLYKYLFHEDLFHDLQYHQAGLRLRVRELLDILRQKYIASGDTIIVGIWGVGGIGKTTIAKAFYDKIGGDFEGKSFLTNIKDVWDKRNGRVLKKQLISDISEVELDEKSDVLVIHEQMKQILHGKRVLVVLDNVDSGFQLMELCGNIKWFGRGSLIFITARNEDIFKNFVDVSYEMKRLDSDESIKLFNWHAFKKSTPTNDFEYLSSTIITFCEGLPLLHEVIGSLLHNRTLQEWQGVLNELGRTSYGQIKTKLYISIDFLTGSEKDLFFNIACFYVGQSKNYVIQLLKGSRFPVKMGMPVIIERNLVKVMNDKLYVHDLLQEIVRSHRDKPLFKYSYDVFLSFRGDDTRKSFATHLCSAIKQAGIDIYMDEERIERGKNISSSLLQAIESSKISIIILSKNYAGSSWCLQELEKIMECYRTTYQEVLPIFFDVRPSEVXKQTNSFGRAWDRLIKRNSSNEVETWTINSRRALIEVANLSGWDMQNYRTETELIDEVIETITKKLGDNKCLFVAHHPVGLKSRMQDILQLLRSKSKDVIIAGIWGMGGIGKTTIAKAIYNQVGQSFEGKCFLANVREVWKQHNGQVYLQEQLLSDILRARRWALPNVEMGKTLLEEMLCKKRVLVVLDDVNNEDQLKALCGSREWFGQGSRVIITTRDQRLLKILRVFHVYNMKELDDNESLELFSWHAFKQAIPEQEDFIELSRRVVSYSGGLPLALEILGSYLFDREILIWKIVLEKLQRIPNDQIQEKLKISYDGLSDHIEKDVFLDICCFLVGKDKSYATQILNGCGFHAEIGINRLIELSLVKVGNKNKLDMHDLLRDMGREIIREQSPEEPENRTRLWFYDDVMDVLTNTTGTMAIKGLALNKSNNNSVSLSAKAFKGMKRLRLLQLNHAQLTGDYNYLSTKLRWLCWHGFPLENMPINLCLKEIVAIDLKWSSLKKVWEKYQLLERLKILILSHSHYLTATPKFTKLPYLEKLILKDCPRLSIIHPSIGDLKYIILLNLKDCKSLKNLPRSVYKLKSLKTLNLCGCSKIEKLEEDIEQMESLSTLVANQTAIVQVPFSLVRLKSIKYVSLCGYEGLSRDVFPSLVLSWMSPTHRSRSLFQTFQILPSLIRSMSHPLFVKSNESVEPRPSTDEASCRKSPTLIEFHEQVPIKRLETFTSTLTIHVGSFNKVADTLLKSISQGWHDGGVDLSIPIDNYPDWLVFVSEGPSVSFRVPQVVGRRLKGVVLYIIYSSFQVSMTSVYPIGLMIKNFTKATMDFYKQDAGTTFTDKEWQNIASNLEPGDEMKVKVEFAHRYNVKKTSIYLIYAEKLMS 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0677 1501 Coils Coil 1219 1239 - -
Prci12g0677 1501 ProSiteProfiles TIR domain profile. 519 688 IPR000157 GO:0007165
Prci12g0677 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 453 IPR027417 -
Prci12g0677 1501 SUPERFAMILY Toll/Interleukin receptor TIR domain 517 665 IPR035897 -
Prci12g0677 1501 Pfam NB-ARC domain 709 935 IPR002182 GO:0043531
Prci12g0677 1501 Pfam NB-ARC domain 224 434 IPR002182 GO:0043531
Prci12g0677 1501 Gene3D - 361 444 IPR042197 -
Prci12g0677 1501 Gene3D - 858 943 IPR042197 -
Prci12g0677 1501 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 129 IPR035897 -
Prci12g0677 1501 Gene3D - 689 851 IPR027417 -
Prci12g0677 1501 ProSiteProfiles TIR domain profile. 25 150 IPR000157 GO:0007165
Prci12g0677 1501 SMART AAA_5 720 860 IPR003593 GO:0016887
Prci12g0677 1501 SMART AAA_5 225 363 IPR003593 GO:0016887
Prci12g0677 1501 FunFam Disease resistance protein (TIR-NBS-LRR class) 518 690 - -
Prci12g0677 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 694 954 IPR027417 -
Prci12g0677 1501 Gene3D - 198 355 IPR027417 -
Prci12g0677 1501 SMART till_3 26 156 IPR000157 GO:0007165
Prci12g0677 1501 SMART till_3 520 662 IPR000157 GO:0007165
Prci12g0677 1501 Gene3D Ribonuclease Inhibitor 1044 1278 IPR032675 -
Prci12g0677 1501 PRINTS Disease resistance protein signature 894 908 - -
Prci12g0677 1501 PRINTS Disease resistance protein signature 723 738 - -
Prci12g0677 1501 PRINTS Disease resistance protein signature 800 814 - -
Prci12g0677 1501 PRINTS Disease resistance protein signature 1203 1219 - -
Prci12g0677 1501 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 521 1238 IPR044974 GO:0006952
Prci12g0677 1501 Gene3D - 19 192 IPR035897 -
Prci12g0677 1501 SUPERFAMILY L domain-like 1013 1279 - -
Prci12g0677 1501 Pfam TIR domain 521 689 IPR000157 GO:0007165
Prci12g0677 1501 Pfam TIR domain 27 126 IPR000157 GO:0007165
Prci12g0677 1501 Gene3D - 517 688 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0677 Prci-Chr12 6462264 6469331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0677 13 515 WRKY Transcription Factor Family AT4G12020 25.631 4.65e-28 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0677 - - pcin:129288830 1876.29