Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0674 ATGTTTGGATATAATAAGCTAGAAGAAAAGAAGGAAAGTAAAATACTGAAATTTTTGGGGTTCATGTGGAATCCATTGTCTTGGGTGATGGAAGCTGCTGCTCTTATGTCCATTGCTATGGCACACGGAGGGGGCGAGCGTGGAGATTATCACGATTTTGCTGGCATAGTCATGTTGCTTCTCATCAATTCTACCATAAGCTTCATGGAAGAAAACAATGCTGGAAATGCAGCTGCTGCACTTATGGCTCGTCTGGCCCCTAAAGCTAAGGTACTGCGTGATGGAAAATGGAGTGAAGAAGATGCCTCAGTGTTGGTTCCTGGCGACATAATCAGCATCAAGCTTGGTGACATTATTCCTGCAGATGCTCGTCTCCTTGAAGGAGATCCTTTAAAGATTGACCAATCTGCTCTGACTGGAGAGTCACTTCCAGTGACCAAAAATCCTGGAGATGGAGTATATTCTGGCTCAACTTGCAAGCAAGGAGAAATAGAAGCTGTGGTTATTGCCACTGGAGTCCACACTTTCTTTGGCAAGGCAGCTCATCTTGTGGAAAATACCACACATATAGGACACTTCCAGAAGGTTCTGACATCCATTGGGAACTTCTGCATTTGTTCGATTGCCGTTGGGATGCTCATCGAAATGATCGTGATATGGGGAATTCATAAGAGAAAATACCGAATTGGAGTTGACAACCTCCTCGTGCTACTCATCGGTGGGATCCCAATTGCAATGCCAACTGTTCTTTCTGTCACAATGGCTATTGGTTCACACAAATTGTCTCAGCAGGGTGCCATAACCAAGAGAATGACTGCCATTGAAGAAATGGCTGGAATGGACGTGCTGTGCAGTGACAAAACAGGCACACTAACTCTTAACAAGCTTTCTGTGGACAAGAGTTTGATTGAGGTTTTTCCCAAAGGCGTTGACAAGGACATGGTTGTACTTATGGCTGCAAGAGCATCAAGGACAGAGAATCAAGATGCAATTGATGGTGCAATTGTTGCAATGTTATCAGATCCAAAAGAGGCAAGAGCCGGTATAACAGAAGTTCATTTCCTTCCATTCAATCCAACTGATAAGAGAACTGCACTTACATATATCGATGCTGATGGTAAGATGAAGAGAGTTAGCAAAGGTGCACCAGAACAGATTCTCAACCTTTCACATAACAAAGCCGAAATTGCACAGAAGGTTCATGCAACTATTGACAAGTTTGCAGAACGTGGACTACGGTCTCTTGCAGTAGCCCGGCAGGAAGTACCTAAAGGAACTAAAGAAAGTGCAGGAGGCCCCTGGGAATTTGTTGGCCTTCTTCCACTTTTTGATCCTCCTCGCCATGATAGTGCGGAAACAATCAGAAGAGCTCTGGATCTTGGCGTGAGTGTTAAAATGATAACAGGAGATCAACTTGCAATTGCTAAGGAAACAGGAAGGCGTCTAGGAATGGGCACTAACATGTATCCTTCTTCATCTCTTCTTGGTGAACACAAAGGTGAAACACTCGAGTCTCTACCAGTTGATGAGCTCATTGAGAACGCTGATGGATTTGCTGGTGTCTTTCCTGAGCACAAGTATGCGATTGTGAAGAGGTTGCAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGTGTAAATGACGCTCCTGCCTTGAAGATAGCAGACATAGGTATAGCTGTAGCAGATGCCACTGATGCTGCTCGAAGTGCATCTGACATAGTTCTAACAGAACCCGGATTGAGTGTGATCATAAGTGCTGTCTTAACTAGCCGTGCTATCTTCCAAAGGATGAAAAACTACACGATATATGCTGTATCTATCACTATACGTATCGTGCTGGGCTTTATGTTACTGACATGCTTTTGGAAATTTGACTTCCCTCCCTTCATGGTTCTTATAATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGACAGAGTTAAGCCTTCTCCAGCACCTGATAGTTGGAAGCTCAGTGAAATTTTTGCAACTGGGATTGTCCTTGGAGGATATCTGGCTCTAATGACTGTAATATTCTTCTGGGCAGCTTATGAAACTGACTTTTTCCATAACCATTTTCATGTGGAAAACTTCAATTCAAACCTTCGTGACATGAAAGATGACGCTGTCGCCAAGGTACTGAATGAGAAGATGGGATCTGCAGTGTATCTTCAAGTCAGTGTCATCAGTCAAGCATTGATCTTTGTGACTCGCGCTCATGGATGGTCTTACACCGAACGACCTGGTCTTTTGCTTGTTTTCGCTTTCGTTGTTGCTCAGCTGGTTGCAACAGTTTTAGCCGCCACTCTGACTTGGAACGTTGGTGGAATCAGAAGCATAGGTTGGAGGTGGACTGGAGTCATCTGGTTATACAACATTGTAACCTATGTATTGTTGGATCCTATAAAATTTGCTGTCCGTTATGCATTAAGTGGAAGGGCTTGGAATTTGGTCGTAAATCAAAGAGTAAGTATGATCAAATTTTCACCAAGACAAACTATATCCATGCTTGTGTGGAATGCTAAATTTTATATGGACTTTCGCTTGGGCTTATACATATTTATCAGAATAACTTAA 2592 0.4309 MFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAALMSIAMAHGGGERGDYHDFAGIVMLLLINSTISFMEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSIGNFCICSIAVGMLIEMIVIWGIHKRKYRIGVDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKGVDKDMVVLMAARASRTENQDAIDGAIVAMLSDPKEARAGITEVHFLPFNPTDKRTALTYIDADGKMKRVSKGAPEQILNLSHNKAEIAQKVHATIDKFAERGLRSLAVARQEVPKGTKESAGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGEHKGETLESLPVDELIENADGFAGVFPEHKYAIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPAPDSWKLSEIFATGIVLGGYLALMTVIFFWAAYETDFFHNHFHVENFNSNLRDMKDDAVAKVLNEKMGSAVYLQVSVISQALIFVTRAHGWSYTERPGLLLVFAFVVAQLVATVLAATLTWNVGGIRSIGWRWTGVIWLYNIVTYVLLDPIKFAVRYALSGRAWNLVVNQRVSMIKFSPRQTISMLVWNAKFYMDFRLGLYIFIRIT 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0674 863 FunFam Plasma membrane ATPase 296 443 - -
Prci12g0674 863 ProSitePatterns E1-E2 ATPases phosphorylation site. 286 292 IPR018303 -
Prci12g0674 863 CDD P-type_ATPase_H 2 809 IPR006534 GO:0008553|GO:0016020|GO:0120029
Prci12g0674 863 SFLD Haloacid Dehalogenase 266 594 - -
Prci12g0674 863 SFLD p-type atpase 266 594 IPR044492 -
Prci12g0674 863 PRINTS P-type cation-transporting ATPase superfamily signature 460 470 - -
Prci12g0674 863 PRINTS P-type cation-transporting ATPase superfamily signature 438 449 - -
Prci12g0674 863 PRINTS P-type cation-transporting ATPase superfamily signature 543 562 - -
Prci12g0674 863 PRINTS P-type cation-transporting ATPase superfamily signature 566 578 - -
Prci12g0674 863 PRINTS P-type cation-transporting ATPase superfamily signature 134 148 - -
Prci12g0674 863 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Prci12g0674 863 PANTHER CALCIUM-TRANSPORTING ATPASE 2 832 - -
Prci12g0674 863 NCBIfam plasma-membrane proton-efflux P-type ATPase 2 773 IPR006534 GO:0008553|GO:0016020|GO:0120029
Prci12g0674 863 Gene3D - 296 443 IPR023299 GO:0000166
Prci12g0674 863 Gene3D - 49 781 - -
Prci12g0674 863 Pfam E1-E2 ATPase 85 263 - -
Prci12g0674 863 FunFam Plasma membrane ATPase 87 171 - -
Prci12g0674 863 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 815 IPR023298 -
Prci12g0674 863 PRINTS H+-transporting ATPase (proton pump) signature 515 531 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g0674 863 PRINTS H+-transporting ATPase (proton pump) signature 574 599 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g0674 863 PRINTS H+-transporting ATPase (proton pump) signature 400 418 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g0674 863 PRINTS H+-transporting ATPase (proton pump) signature 543 559 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g0674 863 PRINTS H+-transporting ATPase (proton pump) signature 728 749 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g0674 863 NCBIfam HAD-IC family P-type ATPase 56 303 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g0674 863 NCBIfam HAD-IC family P-type ATPase 518 623 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g0674 863 Pfam haloacid dehalogenase-like hydrolase 280 557 - -
Prci12g0674 863 FunFam Plasma membrane ATPase 436 591 - -
Prci12g0674 863 SUPERFAMILY Calcium ATPase, transduction domain A 87 184 IPR008250 -
Prci12g0674 863 Gene3D - 281 580 IPR023214 -
Prci12g0674 863 Gene3D - 87 171 - -
Prci12g0674 863 FunFam ATPase 4 plasma membrane-type 526 783 - -
Prci12g0674 863 SUPERFAMILY HAD-like 280 590 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0674 Prci-Chr12 6436076 6443303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0674 1 830 Primary Pumps ATPases AT3G60330 81.566 0.0 1384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0674 K01535 - rcu:8265793 1369.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g0674 12 6436076 6443303 Prci12g0674 12 6436076 6443303 ECH