Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0670 ATGACAAGAGGCTGCATCGAATATGCTAGGAGGTGCAAGAAATATCAGACTCATGAGCCAACACAACAAGTGCCAGTATCAGACATGCATCCAATTATCAAACCACAGCCTTTTCGAGGATGGGCTATGGATATCAATTTGTGGCATATAAAGGGAACGCGCCACCTAGATGGAGGAATTACAGAGGATTCGGCGAGGAATGGTGTGAGAACATGGTTAAGGACTTACGAAAGGGAAGAGGATGCAGCTTTGGCTTATGATAGAGCTACTTTCAAGGTGAAGGGCAGAAAAGCAAAGCTCAATTTTCATCACCTCATTAGGTCAGAGCCACCATCATTGGAGCCGACGAGAGTGGTCGGCCACCAAGCAGTGACACTCGCCGGAACCTCCATCACGGTCAAAAGAGAAGGATGA 414 0.4734 MTRGCIEYARRCKKYQTHEPTQQVPVSDMHPIIKPQPFRGWAMDINLWHIKGTRHLDGGITEDSARNGVRTWLRTYEREEDAALAYDRATFKVKGRKAKLNFHHLIRSEPPSLEPTRVVGHQAVTLAGTSITVKREG 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0670 137 SUPERFAMILY DNA-binding domain 63 104 IPR016177 GO:0003677
Prci12g0670 137 SMART rav1_2 49 109 IPR001471 GO:0003700|GO:0006355
Prci12g0670 137 Gene3D AP2/ERF domain 35 104 IPR036955 GO:0003700|GO:0006355
Prci12g0670 137 ProSiteProfiles AP2/ERF domain profile. 29 103 IPR001471 GO:0003700|GO:0006355
Prci12g0670 137 PANTHER DNA-BINDING DOMAIN 63 108 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0670 Prci-Chr12 6370079 6370638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0670 63 130 AP2-EREBP Transcription Factor Family AT2G44840 52.113 2.38e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0670 K09286 - pcin:129289025 289.271