Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0663 ATGGCTTCACAGTCCCCGAGAAAACATGCAAAGAAACCTTCCTTCTTCAAGGTCTTGATTCGGGATTTCTCAACTCGCTTGAAAATCCCACCAGCTTTTATGAAGGAGTTTGGAAAAGATATGTCAAAGAAAACATCAACACTTATTGAGACTTATAATGGTCGATCTTGGGAAGTTGAAGTGGAAAAGCTCGGAAACAAATTTTATTTTAATAGTGGGTGGCATAAATTTGTGGAAGATAATAATTTGGAAACTGGAGATTTCTTGGTGTTTAAGTATTTTGCAGATTATTCAAAGTTTAAGGTCAAAATCTTTGGCAAAACTTGCTGTGAGAAGCAATCCAATGTGGTTGTTGAGGAGAGGCCTTGTGAACCTCTTAATGGTAAAGTAGATCGTCAGAGAAATGCACAAGAAGGAACAAAAGAAGGAGGAATGAAGAAGAAGAAGATGATGATGATGATATTGCAAGAAGCAAGAAGACTGAATTTGATAGATCCAAAGCATTTGAAAGAAATATAA 519 0.3622 MASQSPRKHAKKPSFFKVLIRDFSTRLKIPPAFMKEFGKDMSKKTSTLIETYNGRSWEVEVEKLGNKFYFNSGWHKFVEDNNLETGDFLVFKYFADYSKFKVKIFGKTCCEKQSNVVVEERPCEPLNGKVDRQRNAQEGTKEGGMKKKKMMMMILQEARRLNLIDPKHLKEI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0663 172 Gene3D - 7 110 IPR015300 -
Prci12g0663 172 SMART B3_2 15 108 IPR003340 GO:0003677
Prci12g0663 172 CDD B3_DNA 13 105 IPR003340 GO:0003677
Prci12g0663 172 ProSiteProfiles B3 DNA-binding domain profile. 12 108 IPR003340 GO:0003677
Prci12g0663 172 Pfam B3 DNA binding domain 15 107 IPR003340 GO:0003677
Prci12g0663 172 SUPERFAMILY DNA-binding pseudobarrel domain 11 113 IPR015300 -
Prci12g0663 172 PANTHER B3 DOMAIN-CONTAINING 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0663 Prci-Chr12 6167975 6168761 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0663 10 139 B3 DNA Binding Superfamily AT5G66980 36.806 1.51e-15 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci12g0663 B3 1.1e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0663 - - pcin:129289019 333.569