Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci12g0662 | ATGGCTTCTCAATCCCTGAGAAAACGTAAAATGAAGCCTTCATTCTTCAAGGTCTTGATGAAAGATTTCTCTACTCGCCTGAAAATCCCACCAGCTTTTATGAAGGAGTTTGGGAAACACTTGGCAAAGAAAGCAACGCTTGAGACTGATTATGATAAATCATGGGAAGTTGGAGTGGAAAAACTTGGAAACAAATTTTATTTAAATAATGGATGGAGTAAATTTGTGGAAGACAATAATTTGGAAACTGGAGATTTCTTGGTGTTAAAGTATTTTGCACATTATTCTTTGTTTAAGGTCAAAATCTATGGTAAAACTTGCTGTGAGAAGAAATTGAACGTGGTTGGCAAAGGCAAAGATCAGATAAATGAACAAGGAAGAAGAAAAAGAAAGAGGAATGAAGAAGAAGATGATAATAACAATGTAAAGAGGAACGAGACTGAATTTGTTCGATCCAAAGCTTTCAAAAGTGATGTAATTAAAATTGATCCTGACTCTTCTTCGTCTTCTGATGATGACGATGAAGAAATTAGAAAAGGAAGTATCCAGAAAAGAAAAGCACAAACTGTTTGGCTGAAGACGAATATGCCTCAAGATTATCAAAACCATATAGAATTCAAATCTGAGAATCCCTTCTTTCAACTTCAGCTCAAGTTTTCAACTACCAATTTTTATCTGTACATACCCAAAGGTTTTTTCATGGAACATTTGAAGGAAAGCAAAAGGATCAAGTTAAAGATATGTGAAAAAACTTGGGATATGGAGATTCATGTGTATGAACATGAACGTGGTACAAAGCGAACACAAGGAGCCAGAGTGACTCAGGGATGGAAGAGAGCAGTGAAAGAACAGAATTTGGAAATGGACGATGTTTGCTTCTTTGAAATGATAAAAAAGTTTGATACTGATTTTGTGTTTCGTGTTCACGTTTACAGGTGGGATGATCGGAAAGCAAAGTTTTCCAAGATAATTTAG | 975 | 0.3528 | MASQSLRKRKMKPSFFKVLMKDFSTRLKIPPAFMKEFGKHLAKKATLETDYDKSWEVGVEKLGNKFYLNNGWSKFVEDNNLETGDFLVLKYFAHYSLFKVKIYGKTCCEKKLNVVGKGKDQINEQGRRKRKRNEEEDDNNNVKRNETEFVRSKAFKSDVIKIDPDSSSSSDDDDEEIRKGSIQKRKAQTVWLKTNMPQDYQNHIEFKSENPFFQLQLKFSTTNFYLYIPKGFFMEHLKESKRIKLKICEKTWDMEIHVYEHERGTKRTQGARVTQGWKRAVKEQNLEMDDVCFFEMIKKFDTDFVFRVHVYRWDDRKAKFSKII | 324 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci12g0662 | 324 | Gene3D | - | 193 | 315 | IPR015300 | - | |
Prci12g0662 | 324 | ProSiteProfiles | B3 DNA-binding domain profile. | 12 | 106 | IPR003340 | GO:0003677 | |
Prci12g0662 | 324 | MobiDBLite | consensus disorder prediction | 119 | 143 | - | - | |
Prci12g0662 | 324 | SUPERFAMILY | DNA-binding pseudobarrel domain | 206 | 314 | IPR015300 | - | |
Prci12g0662 | 324 | ProSiteProfiles | B3 DNA-binding domain profile. | 211 | 314 | IPR003340 | GO:0003677 | |
Prci12g0662 | 324 | Gene3D | - | 6 | 108 | IPR015300 | - | |
Prci12g0662 | 324 | PANTHER | B3 DOMAIN-CONTAINING | 10 | 299 | - | - | |
Prci12g0662 | 324 | CDD | B3_DNA | 211 | 312 | IPR003340 | GO:0003677 | |
Prci12g0662 | 324 | Pfam | B3 DNA binding domain | 221 | 311 | IPR003340 | GO:0003677 | |
Prci12g0662 | 324 | Pfam | B3 DNA binding domain | 15 | 103 | IPR003340 | GO:0003677 | |
Prci12g0662 | 324 | SUPERFAMILY | DNA-binding pseudobarrel domain | 13 | 112 | IPR015300 | - | |
Prci12g0662 | 324 | MobiDBLite | consensus disorder prediction | 161 | 181 | - | - | |
Prci12g0662 | 324 | SMART | B3_2 | 213 | 310 | IPR003340 | GO:0003677 | |
Prci12g0662 | 324 | SMART | B3_2 | 15 | 106 | IPR003340 | GO:0003677 | |
Prci12g0662 | 324 | CDD | B3_DNA | 13 | 103 | IPR003340 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci12g0662 | Prci-Chr12 | 6163606 | 6165949 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci12g0662 | 12 | 315 | B3 DNA Binding Superfamily | AT3G18990 | 25.284 | 2.44e-21 | 91.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Prci12g0662 | B3 | 1.7e-09 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci12g0662 | - | - | pcin:129289018 | 626.706 |