Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0661 ATGGTTGATGCGCATAGAAAATCAAGTTTTCTGATGGAGCTGGTAGAGGAGCCTTCTTTCTTTAAGATATTGATCAATGATTTCTCTATTCGCTTGCAAATCCCACCAGCTTTAACAAGCATGTTCGGTCAAGACGTGCCAAATAAAACTATAGTACTTGAGACTTATTTAGGCAAATCTGGAGAAGTCAAATTAGAAAAGCTTGGAAGCAGATTCTATTTCAACAATGGATGGAGTGACTTTGTGAAAGCTAATAATTTGGAGCAAGGAGATCTTTTGCTCTTCAAATATTTCGCAGATGATCCAAAATTCAAGGTTACAATCTATGGAAAAACATGCTGTGGTCATGTGGGAAAGTCAACGTGCAAACAGCAGACTCAAGATCAGAAAACAACTAAATTCAAAAAGAGTAGAGTATTGAAGTACAGGAGATTGCTTCCTGATAAGAACCAAATAAAATTCACTTCTGATAATCCTTTCTTTCAAGTTCAACTCAAGTGTTCAAATGTCACTGATTATCTGCAAATCCCACCAGCTTTTATCAACATGTATGGTAAAGACATTCGAAGCAAAACAAGCCTTGAGGCTTTCGGTAAGAGTGCACAAGTCAAATTGGAAAAGCTTGGGAAGAGATTCTATTTCAGTAATGGTTGGAGTGAGTTTGTGAAAGCTAGTAATTTGGAGGTGGGAGACTTTTTAGTCTTCAAATATTTCCCATATCATTCAAAATTCAAGGTCACAGTCTATGGCAAAACTTGCTGTGTGAAGCATCAGTTTAATGATGGAGCTGGAGATCATCAGAGGTGTTCTGAACCAGTAAATGGAAAAGAAGATCAGAGAATTAATGTTCCAGAAGGAAGAAAAAGAAAGCTGGTTGATGATGATGATGATGAAACCAAGGCAATTATTATCCATTCTGATACCTCTCGTTCTGCTGATGATGATGATGATGAACCAAGGCAATTATTATCCATTCTGATACCTCGTTCTGATGATGATGATGACGATGAAACTGGTAAGCTTCTTTGTTGA 1032 0.3721 MVDAHRKSSFLMELVEEPSFFKILINDFSIRLQIPPALTSMFGQDVPNKTIVLETYLGKSGEVKLEKLGSRFYFNNGWSDFVKANNLEQGDLLLFKYFADDPKFKVTIYGKTCCGHVGKSTCKQQTQDQKTTKFKKSRVLKYRRLLPDKNQIKFTSDNPFFQVQLKCSNVTDYLQIPPAFINMYGKDIRSKTSLEAFGKSAQVKLEKLGKRFYFSNGWSEFVKASNLEVGDFLVFKYFPYHSKFKVTVYGKTCCVKHQFNDGAGDHQRCSEPVNGKEDQRINVPEGRKRKLVDDDDDETKAIIIHSDTSRSADDDDDEPRQLLSILIPRSDDDDDDETGKLLC 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0661 343 MobiDBLite consensus disorder prediction 270 343 - -
Prci12g0661 343 CDD B3_DNA 159 249 IPR003340 GO:0003677
Prci12g0661 343 Gene3D - 147 252 IPR015300 -
Prci12g0661 343 Pfam B3 DNA binding domain 171 248 IPR003340 GO:0003677
Prci12g0661 343 Pfam B3 DNA binding domain 20 109 IPR003340 GO:0003677
Prci12g0661 343 ProSiteProfiles B3 DNA-binding domain profile. 17 112 IPR003340 GO:0003677
Prci12g0661 343 PANTHER B3 DOMAIN-CONTAINING 155 287 - -
Prci12g0661 343 CDD B3_DNA 18 109 IPR003340 GO:0003677
Prci12g0661 343 ProSiteProfiles B3 DNA-binding domain profile. 159 252 IPR003340 GO:0003677
Prci12g0661 343 MobiDBLite consensus disorder prediction 263 343 - -
Prci12g0661 343 SMART B3_2 20 112 IPR003340 GO:0003677
Prci12g0661 343 SMART B3_2 160 252 IPR003340 GO:0003677
Prci12g0661 343 SUPERFAMILY DNA-binding pseudobarrel domain 17 114 IPR015300 -
Prci12g0661 343 Gene3D - 12 114 IPR015300 -
Prci12g0661 343 SUPERFAMILY DNA-binding pseudobarrel domain 154 254 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0661 Prci-Chr12 6147250 6151945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0661 149 254 REM Transcription Factor Family AT4G31640 33.028 4.58e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci12g0661 B3 6.6e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0661 - - pcin:129289017 662.144