Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0656 ATGGCGATGCTGAGCTCAAAACACAGTCATTGTTTCTGCTTCATCACATTGTTGCTTCATTTTGGCCTTCTCTTCCTCATCTGCGCTCAACCTGCTCACTCCTCTGCTGGTTCCACAGTGGAGTTTCTTCCTGGCTTCCATGGACCCCTTCCTTTTCATCTTCAAACTGGGTACGTGGGACTTGGGGAATCTGCAGAAGAAGTTCAAGTTTTCTGTTATTTCGTCAAGTCTGAGAACAATCCTCAAGACGATCCTCTCCTTCTTTGGCTATCTGGAGGTCCTGGTTGCACTTCTTTCGCTGGCCTCGCCTTTGAAATAGGCTTCACATATGCCAAAACAGAAGCTGCTAATCAATCAAGTGACTGGGGCCTAGCTCATCATGCTCATCAATTTTTAAGGAAGTGGTTAATCAATAATCCAGAATACCTATCACATAAAGTGTATGTCGGTGGTGATTCTTATTCTGGCATTCCTATCCCGGCCTTGTTTCAAGAAATTTTATATGGAAATGAAAATGGGGTACAACCGCGGATAAATATTCAGGGATACATCCTTGGGAATCCCCTGACAACACGCCATGAAATAAACTATGAAATCCCATTTGCTCATGGAATGGGACTGATTTCTGATGAACTCTATGAGTCATTACAGAAATATTGTGAAGGAGAATATGGAAATATAGACACCAATAACTTGTCATGTCTCAGAGACTACCAATTATTCCGAGAGTTAATTGAAGAAGTCGATGTCTCTATGATTTTGGAACCCGGCTTTTGTGGCTATAAAATGTTTGTTATTCCCCCAAGAAATTCTTTGATGAAGAGATCTCTAGTTCAAAAAGTAAAGGGTATTAGTATTCCATCAAAATGTCGGCGACTTGGATATTTGCAAGCTCATTACTGGGGCAATGACGATGACGTTCAAAAAGCACTCCATGTTCGAAAGGGAACAACATATTATTGGAGGCATTGTAATTACGATTTGAACTATAAGCAGGACATTGATAACAGCTTTTATATTCATGTAAATCTCAGTACAAAGGGTTATCGTTCTTTGATATACAGTGGGGATCATGACATGACGATTTCCTTCTTATCAACACAAGCATGGATCAGATCTTTAAATTACTCTATCATTGATGACTGGAGACCTTGGCATGTCAATGGGCAAGTTGCCGGATACACAAGAACTTACTCCAATGGCATGACATATGCAACCGTTAAGGGTGCAGGACATACAGCTCCAGAATTCACACCTGAAGAATGTTTTGCTATGTTCAAGAGATGGATATCTAATGAGCATCTCTAA 1308 0.4067 MAMLSSKHSHCFCFITLLLHFGLLFLICAQPAHSSAGSTVEFLPGFHGPLPFHLQTGYVGLGESAEEVQVFCYFVKSENNPQDDPLLLWLSGGPGCTSFAGLAFEIGFTYAKTEAANQSSDWGLAHHAHQFLRKWLINNPEYLSHKVYVGGDSYSGIPIPALFQEILYGNENGVQPRINIQGYILGNPLTTRHEINYEIPFAHGMGLISDELYESLQKYCEGEYGNIDTNNLSCLRDYQLFRELIEEVDVSMILEPGFCGYKMFVIPPRNSLMKRSLVQKVKGISIPSKCRRLGYLQAHYWGNDDDVQKALHVRKGTTYYWRHCNYDLNYKQDIDNSFYIHVNLSTKGYRSLIYSGDHDMTISFLSTQAWIRSLNYSIIDDWRPWHVNGQVAGYTRTYSNGMTYATVKGAGHTAPEFTPEECFAMFKRWISNEHL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0656 435 Gene3D alpha/beta hydrolase 107 259 IPR029058 -
Prci12g0656 435 Pfam Serine carboxypeptidase 106 432 IPR001563 GO:0004185|GO:0006508
Prci12g0656 435 Gene3D alpha/beta hydrolase 33 106 IPR029058 -
Prci12g0656 435 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 107 IPR001563 GO:0004185|GO:0006508
Prci12g0656 435 FunFam Carboxypeptidase 289 434 - -
Prci12g0656 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Prci12g0656 435 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 160 IPR001563 GO:0004185|GO:0006508
Prci12g0656 435 SUPERFAMILY alpha/beta-Hydrolases 40 433 IPR029058 -
Prci12g0656 435 FunFam Carboxypeptidase 338 432 - -
Prci12g0656 435 Gene3D - 293 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0656 Prci-Chr12 5979023 5995335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0656 33 63 Calmodulin-binding Proteins AT2G22960 61.290 7.99e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0656 K16296 - gmx:100792006 504.597