Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0655 ATGGCGATGCTGAGCTCAAAACACAGTCATTGTTTCTGCTTCATCACATTGTTGCTTCATTTTGGCCTTCTCTTCCTCATCTGCGCTCAACCTGCTCACTCCTCTGCTGGTTCCACAGTGGAGTTTCTTCCTGGCTTCCATGGACCCCTTCCTTTTCATCTTCAAACTGGGTACGTGGGACTTGGGGAATCTGCAGAAGAAGTTCAAGTTTTCTGTTATTTCGTCAAGTCTGAGAACAATCCTCAAGACGATCCTCTCCTTCTTTGGCTATCTGGAGGTCCTGGTTGCACTTCTTTCGCTGGCCTCGCCTTTGAAATAGGTCCATTCACATTTATAAACCAAGAATACAATGGGACTTTGCCTAACTTAGTCTTAAGGCCACAATCATGGACTAAGGTAAGTAATATAATTTTTCCAGATTTGCCCGTTGGAACAGGCTTCACATATGCCAAAACAGAAGCTGCTAATCAATCAAGTGACTGGGGCCTAGCTCATCATGCTCATCAATTTTTAAGGAAGGGATACATCCTTGGGAATCCCCTGACAACACGCCATGAAATAAACTATGAAATCCCATTTGCTCATGGAATGGGACTGATTTCTGATGAACTCTATGAGTCATTACAGAAATATTGTGAAGGAGAATATGGAAATATAGACACCAATAACTTGTCATGTCTCAGAGACTACCAATTATTCCGAGAGTTAATTGAAGAAGTCGATGTCTCTATGATTTTGGAACCCGGCTTTTGTGGCTATAAAATGTTTGTTATTCCCCCAAGAAATTCTTTGATGAAGAGATCTCTAGTTCAAAAAGTAAAGGGTATTAGTATTCCATCAAAATGTCGGCGACTTGGATATTTGCAAGCTCATTACTGGGGCAATGACGATGACGTTCAAAAAGCACTCCATGTTCGAAAGGGAACAACATATTATTGGAGGCATTGTAATTACGATTTGAACTATAAGCAGGACATTGATAACAGCTTTTATATTCATGTAAATCTCAGTACAAAGGGTTATCGTTCTTTGATATACAGTGGGGATCATGACATGACGATTTCCTTCTTATCAACACAAGCATGGATCAGATCTTTAAATTACTCTATCATTGATGACTGGAGACCTTGGCATGTCAATGGGCAAGTTGCCGGATACACAAGAACTTACTCCAATGGCATGACATATGCAACCGTTAAGGGTGCAGGACATACAGCTCCAGAATTCACACCTGAAGAATGTTTTGCTATGTTCAAGAGATGGATATCTAATGAGCATCTCTAA 1284 0.4073 MAMLSSKHSHCFCFITLLLHFGLLFLICAQPAHSSAGSTVEFLPGFHGPLPFHLQTGYVGLGESAEEVQVFCYFVKSENNPQDDPLLLWLSGGPGCTSFAGLAFEIGPFTFINQEYNGTLPNLVLRPQSWTKVSNIIFPDLPVGTGFTYAKTEAANQSSDWGLAHHAHQFLRKGYILGNPLTTRHEINYEIPFAHGMGLISDELYESLQKYCEGEYGNIDTNNLSCLRDYQLFRELIEEVDVSMILEPGFCGYKMFVIPPRNSLMKRSLVQKVKGISIPSKCRRLGYLQAHYWGNDDDVQKALHVRKGTTYYWRHCNYDLNYKQDIDNSFYIHVNLSTKGYRSLIYSGDHDMTISFLSTQAWIRSLNYSIIDDWRPWHVNGQVAGYTRTYSNGMTYATVKGAGHTAPEFTPEECFAMFKRWISNEHL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0655 427 Gene3D alpha/beta hydrolase 173 427 IPR029058 -
Prci12g0655 427 FunFam Carboxypeptidase 330 424 - -
Prci12g0655 427 Gene3D alpha/beta hydrolase 33 172 IPR029058 -
Prci12g0655 427 PRINTS Carboxypeptidase C serine protease (S10) family signature 394 407 IPR001563 GO:0004185|GO:0006508
Prci12g0655 427 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Prci12g0655 427 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Prci12g0655 427 FunFam Carboxypeptidase 281 426 - -
Prci12g0655 427 SUPERFAMILY alpha/beta-Hydrolases 40 425 IPR029058 -
Prci12g0655 427 Pfam Serine carboxypeptidase 44 172 IPR001563 GO:0004185|GO:0006508
Prci12g0655 427 Pfam Serine carboxypeptidase 173 424 IPR001563 GO:0004185|GO:0006508
Prci12g0655 427 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 173 411 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0655 Prci-Chr12 5979023 5995335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0655 33 63 Calmodulin-binding Proteins AT2G22960 61.290 8.02e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0655 K16296 - gmx:100794342 498.049