Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0654 ATGGCGATGCTGAGCTCAAAACACAGTCATTGTTTCTGCTTCATCACATTGTTGCTTCATTTTGGCCTTCTCTTCCTCATCTGCGCTCAACCTGCTCACTCCTCTGCTGGTTCCACAGTGGAGTTTCTTCCTGGCTTCCATGGACCCCTTCCTTTTCATCTTCAAACTGGGTACGTGGGACTTGGGGAATCTGCAGAAGAAGTTCAAGTTTTCTGTTATTTCGTCAAGTCTGAGAACAATCCTCAAGACGATCCTCTCCTTCTTTGGCTATCTGGAGGTCCTGGTTGCACTTCTTTCGCTGGCCTCGCCTTTGAAATAGGTCCATTCACATTTATAAACCAAGAATACAATGGGACTTTGCCTAACTTAGTCTTAAGGCCACAATCATGGACTAAGGTAAGTAATATAATTTTTCCAGATTTGCCCGTTGGAACAGGCTTCACATATGCCAAAACAGAAGCTGCTAATCAATCAAGTGACTGGGGCCTAGCTCATCATGCTCATCAATTTTTAAGGAAGTGGTTAATCAATAATCCAGAATACCTATCACATAAAGTGTATGTCGGTGGTGATTCTTATTCTGGCATTCCTATCCCGGCCTTGTTTCAAGAAATTTTATATGGAAATGAAAATGGGGTACAACCGCGGATAAATATTCAGGGATACATCCTTGGGAATCCCCTGACAACACGCCATGAAATAAACTATGAAATCCCATTTGCTCATGGAATGGGACTGATTTCTGATGAACTCTATGAGTCATTACAGAAATATTGTGAAGGAGAATATGGAAATATAGACACCAATAACTTGTCATGTCTCAGAGACTACCAATTATTCCGAGAGTTAATTGAAGAAGTCGATGTCTCTATGATTTTGGAACCCGGCTTTTGTGGCTATAAAATGTTTGTTATTCCCCCAAGAAATTCTTTGATGAAGAGATCTCTAGTTCAAAAAGTAAAGGGTATTAGTATTCCATCAAAATGTCGGCGACTTGGATATTTGCAAGCTCATTACTGGGGCAATGACGATGACGTTCAAAAAGCACTCCATGTTCGAAAGGGAACAACATATTATTGGAGGCATTGTAATTACGATTTGAACTATAAGCAGGACATTGATAACAGCTTTTATATTCATGTAAATCTCAGTACAAAGGGTTATCGTTCTTTGATATACAGTGGGGATCATGACATGACGATTTCCTTCTTATCAACACAAGCATGGATCAGATCTTTAAATTACTCTATCATTGATGACTGGAGACCTTGGCATGTCAATGGGCAAGTTGCCGGATACACAAGAACTTACTCCAATGGCATGACATATGCAACCGTTAAGGGTGCAGGACATACAGCTCCAGAATTCACACCTGAAGAATGTTTTGCTATGTTCAAGAGATGGATATCTAATGAGCATCTCTAA 1425 0.4035 MAMLSSKHSHCFCFITLLLHFGLLFLICAQPAHSSAGSTVEFLPGFHGPLPFHLQTGYVGLGESAEEVQVFCYFVKSENNPQDDPLLLWLSGGPGCTSFAGLAFEIGPFTFINQEYNGTLPNLVLRPQSWTKVSNIIFPDLPVGTGFTYAKTEAANQSSDWGLAHHAHQFLRKWLINNPEYLSHKVYVGGDSYSGIPIPALFQEILYGNENGVQPRINIQGYILGNPLTTRHEINYEIPFAHGMGLISDELYESLQKYCEGEYGNIDTNNLSCLRDYQLFRELIEEVDVSMILEPGFCGYKMFVIPPRNSLMKRSLVQKVKGISIPSKCRRLGYLQAHYWGNDDDVQKALHVRKGTTYYWRHCNYDLNYKQDIDNSFYIHVNLSTKGYRSLIYSGDHDMTISFLSTQAWIRSLNYSIIDDWRPWHVNGQVAGYTRTYSNGMTYATVKGAGHTAPEFTPEECFAMFKRWISNEHL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0654 474 Pfam Serine carboxypeptidase 44 471 IPR001563 GO:0004185|GO:0006508
Prci12g0654 474 FunFam Carboxypeptidase 328 473 - -
Prci12g0654 474 FunFam Serine carboxypeptidase-like 11 34 474 - -
Prci12g0654 474 Gene3D alpha/beta hydrolase 33 301 IPR029058 -
Prci12g0654 474 FunFam Carboxypeptidase 377 471 - -
Prci12g0654 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Prci12g0654 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Prci12g0654 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Prci12g0654 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Prci12g0654 474 SUPERFAMILY alpha/beta-Hydrolases 40 472 IPR029058 -
Prci12g0654 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 458 IPR001563 GO:0004185|GO:0006508
Prci12g0654 474 Gene3D - 332 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0654 Prci-Chr12 5979023 5995335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0654 33 63 Calmodulin-binding Proteins AT2G22960 61.290 1.07e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0654 K16296 - gmx:100794342 585.104