Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0648 ATGAGTTCTTTTCTGAAGCCTGAAAACGCTCTAAAAAGAGCTGAAGAATTGATCAATGTTGGACAGAAGCAAGATGCTTTGCAAACTCTTCATGGCCTTATCACTTCAAAAAGATATAGAGCATGGCAGAAGACGCTTGAAAGGATAATGTTTAAATATGTAGAACTGTGCGTAGACATGCGGAAAGGGCGATTTGCAAAGGATGGGCTCATTCAGTATCGTATTATATGTCAACAAGTTAATGTTAGTTCACTGGAGGAGGTGATCAAACATTTCATGCATCTGTCAACTGAGAAAGCTGAACAAGCTCGCAGCCAGGCACAGGCGTTAGAAGAGGCTCTTGATGTTGATGATTTAGAGGCGGATAAAAGGCCCGAGGACTTGATGCTTAGCTATGTGAGTGGGGAGAAAGGAAAAGAAAGATCTGACCGGGAAGTTGTTACTCCATGGTTTAAATTTCTTTGGGAAACATACAGGACAGTGCTTGAAATATTACGGAACAATTCAAAACTGGAAGCTCTGTATGCTATGACAGCGCATCGCGCTTTTCAATTTTGTAAGCAATATAAGCGAACAACAGAGTTCCGCAGACTTTGTGAAATTATTAGAAACCATCTAGCCAATCTTAATAAATATCGAGACCAACGGGACCGACCTGATCTTTCAGCACCTGAAAGCTTGCAACTATATCTAGATACCAGATTTGAGCAACTGAAAGTGGCCACTGAACTTGAACTCTGGCAGGAAGCTTTTAGATCTATTGAAGATATACATGGACTAATGTGCATTGTCAAGAAAACACCCAAGGCATCGTTGATGGTTCTTTACTATGCTAAGCTTACAGAAATATTTTGGATATCATCAAGCCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTGCTTCAGAAGAGCTTCAATAAGAATCTGAGCCAGAAGGATCTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCCCATGATCACACTCAGGGTGCTTCTCATTTGGAATTGGAGCATGAAAAGGAGAGGAATTTGAGGATGGCTAATCTTATTGGTTTTAGCCTTGAAAGTAAACCAGAGAGCAGAGAAGTGCTTTCAAGGTCAGCTCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGTAACTCAGGAAGTGAAGGACATTTATCATCTCCTGGAACATGAATTTTTTCCCCTAGATCTTCCATCAAAAGTTCAGCCTCTCGTAACAAAAATATCAAAGCTAGGGGGTAAGCTTTCCACTGCTTCTGTCCCGGAGGTACAACTGTCTCAGTATGTCCCAGCACTGGAGAAACTAGCTACTTTGAGGTTGCTACAGCAGGTGTCCAATGTTTACCAGACAATGAAGATTGAGACCTTATCCGGAATGATCCCGTTTTTTGATTTTTCTGTTGTGGAAAAGATTTCTGTGGATGCTGCGAAGCATCAATTTGTATCCATGAAAGTTGACCACATGAGGAATGTTGTGGTTTTCTGCAAGACGAGTCTTGAGTCTGATGGCTTAAGGGATCATTTGGCTAATTTTGCTGAGCATCTGAATAAGGCAAGACAAATGATTTATCCTCCTGATAGAAAACCATCAAAAATTGCAGCTTTGCTTCCCACTTTGAACGAGGTTGTGGCCAAGGAACACAAGAGGCTTCTTGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAACGTCAGCTTCTTGAAATGGAAAGAGAGGAGGAATCAAAGAGATTAAGACTGCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGCGGAAGAATCAGAGAATCCTCAGAGAAATAGAAGAAAGAGAAATGGAAGAAGCTCAAGCATTGCTTCAGGAAGCTGAGAAGCGCATTAAAAAGAAGGGAAAGAAGCCAATCATAGAGGGTGAGAAACTGACCAAGCAAACACTGATGGAGATGACTTTGACTGAACAACTCCGGGAAAGACAAGAAATGGAAAAGAAACTACAAAAATTAGCTAAGACAATGGACTATTTGGAAAGAGCCAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCTGCGTATCAAAAGCGTCTAGTTGAAGAGAAGCTTCTTCATGAGCGTGAGCAACAGCTTGAGATAGAAGTTAGCAAACAGCGCCATGAAGGAGATCTCAAGGAGAAGGAAAGGCTGGCACGTATGGTTGGCAATAAAGATATTTATCAAGAGAGAGTTGTCAGTCGTCGTCAGGCAGAATTTAATAGATTGAGGCGGGAAAGAGAGGAGCGAATCTCAAGGATTTTACAGTCCAGGAGACAAGAGAGGGAAAAGATGAGGAAGTTGAAGTATTATCTGAGGCAAGAAGAAGAGATACAGCAAAAATTGCGTGAAGAGGAGGAGGTTCGGAAGCGCGAAGAGGCTGAGAGGCGGAAGAAGGAAGAGGCTGAGCGCTTGGCCAAATTGGCTGAGATAGCAGAAAAGCAGAGGCAAAGAGAGCGGGAACTGGAAGAGAAGGCAGAGAGGCAAAAGAAAGAAGCGTTATTTGGAAGAAGTGGTGAAGCGGCTGTGAAGCCTCTTGAACCCTCAGCCTGCCCATCGGAGGCTGGATCTACTGCTCCTGCAGCTGCTGCAGCTGCTGCTGCGCCGACCCCTGGGAAATATGTTCCTAAGTTCCGCCGTGAGAGAACCGACGTTACAAGCCATACTGCTCCTCCTCCAGAAACAGATCGATGGACAAACTCTGGCAGGCAGGATGGTGACAGATGGCGTAGTGACGATCGAAGACCTGCTTTTGGTGCTGGTGGGGGTTCGAGGTCGTCATCAACATGGTCCTCGTCCAGGCGTTGA 2880 0.4378 MSSFLKPENALKRAEELINVGQKQDALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKERSDREVVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKASLMVLYYAKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTQGASHLELEHEKERNLRMANLIGFSLESKPESREVLSRSALLAELVSKGVMSCVTQEVKDIYHLLEHEFFPLDLPSKVQPLVTKISKLGGKLSTASVPEVQLSQYVPALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVEKISVDAAKHQFVSMKVDHMRNVVVFCKTSLESDGLRDHLANFAEHLNKARQMIYPPDRKPSKIAALLPTLNEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKLTKQTLMEMTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKRLVEEKLLHEREQQLEIEVSKQRHEGDLKEKERLARMVGNKDIYQERVVSRRQAEFNRLRREREERISRILQSRRQEREKMRKLKYYLRQEEEIQQKLREEEEVRKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKAERQKKEALFGRSGEAAVKPLEPSACPSEAGSTAPAAAAAAAAPTPGKYVPKFRRERTDVTSHTAPPPETDRWTNSGRQDGDRWRSDDRRPAFGAGGGSRSSSTWSSSRR 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0648 959 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 939 IPR027512 GO:0005852
Prci12g0648 959 Coils Coil 792 856 - -
Prci12g0648 959 Gene3D - 268 342 - -
Prci12g0648 959 Gene3D - 354 493 - -
Prci12g0648 959 MobiDBLite consensus disorder prediction 924 939 - -
Prci12g0648 959 Gene3D UVR domain 217 267 - -
Prci12g0648 959 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Prci12g0648 959 Coils Coil 560 601 - -
Prci12g0648 959 MobiDBLite consensus disorder prediction 838 861 - -
Prci12g0648 959 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Prci12g0648 959 Coils Coil 666 696 - -
Prci12g0648 959 ProSiteProfiles PCI domain profile. 316 512 IPR000717 -
Prci12g0648 959 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 950 IPR027512 GO:0005852
Prci12g0648 959 Pfam PCI domain 373 507 IPR000717 -
Prci12g0648 959 FunFam Eukaryotic translation initiation factor 3 subunit A 352 493 - -
Prci12g0648 959 Coils Coil 93 120 - -
Prci12g0648 959 Coils Coil 614 648 - -
Prci12g0648 959 MobiDBLite consensus disorder prediction 838 959 - -
Prci12g0648 959 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 440 531 IPR000717 -
Prci12g0648 959 MobiDBLite consensus disorder prediction 808 827 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0648 1 958 Eukaryotic Initiation Factors Gene Family AT4G11420 72.561 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0648 K03254 - gmx:100782598 1456.04