Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0646 ATGGTTCTGAGTAGCCGAACTTTCTGTACTCGTGTTGTTATTATTAATTTCTTGTTGCTGCTTAGTTGTCACATGGTCTATGGGACTGTTACGGACATCTTCTGCTTGAAAAAGATAAAAGATTCACTTCAAGACCCAAACGGATATTTGAAGTCTTCCTGGGATTTCAACAACAACACAGAAGGATTTATCTGTAGATTTACTGGGGTTGAATGTTGGCACCCTGATGAGAACAAGGTCTTAAATCTAAAGTTGTCAAACATGGGACTCAAGGGCCAGTTTCCTCGTGCCATTCAAAATTGCTCGAGTTTAACAGGATTGGATCTATCACTTAACAAACTTTCTGGAACAATTCCAGCAGATATCAATAAGATCCTTACATTTGTGACAACTCTTGATCTTTCTTCAAATGACTTTTCTGGGTCGATTCCTGTTGGGCTTGCAAATTGTTCTTATCTTAATTCCCTCAAACTTGATCAAAATCGACTCACCGGACAAATCCCTGGAGAATTCAGCACGCTTACAAGGCTCAAGGCATTTACTGTCACAAACAATCTTTTGACAGGTCCTATTCCATACCTTCCAAACATCTCAGGTGATAGCTATGTAAATAATGCTGGACTATGTGGTACCCCTTTGCCAACCTGCCAGGCCTCATCCTCCAAGAGTAACACTGCAGTTATAGCCGGAGCAGCTGTTGGCGGGGTGACAGTTGGAGCATTGGCAATAGGTATTGGCTTGTTCTTCTTTGTCAGACGAGTAGCTGTGATTAAGAAGGAAGAAGACCCTGAAGGAAACAAATGGGCTAGAAGTCTAAAGGGAACTAAAGGAATAAAGGTTTCAATGTTTGAGAAGTCGGTTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAAAGGCAACATTATCGGGACTGGAAGAACAGGAACCATGTACAAAGCTGTCCTTGATGATGGCACATCACTCATGGTAAAGAGATTGCAGGAATCTCAACACTCTGAGAAAGAATTTCTGTCTGAGATGTCTACCCTTGGGGCTGTCAGGCATCGTAACTTGGTTCCTCTTTTGGGTTTTTGCCTGGCCAAGAAGGAGAGGCTTTTGGTCTATAGATATATGTCAAATGGCTATCTTCATGATCAGCTACATCCTGCTGAAGGTCAGAGCACCCTGGAGTGGCCTACGAGGCTTAAAATTGCAATTGGAGCAGCAAAAGGATTAGCATGGCTTCATCATAGTTGCAATCCCCGTATCATCCATCGTAACATAAGCTCTAAGTGCATCTTACTGGATTCTGATTTTGAGCCCAAAATTTCTGATTTCGGGCTTGCTCGACTGATGAACCCAATTGATACACATTTGAGTACTTTTGTGAACGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAGTATGCAAGAACACTTGTGGCTACACCAAAAGGGGATGTTTATAGCTTCGGGGTTGTTCTTCTCGAGTTGGTGACTGGTGAAAGACCCACATATGTGGCTAAAGCTCCGGAAACATTCAAGGGAAGTTTGGTTGAATGGATTACCCAACTGTCAAGCAGCTCTGAACTGCAGACTGCCATTGATGAATCGTTAGGTGGGAAGGGATTTGATAACGAGGTTTTCCAGTTTCTTAAGGTTGCATGCAACTGTGTTTCATCAACTCCAAAAGAAAGGCCCACTTTGTTTGAAGTATACCAGTTTCTAAGATCCATTGGGAGTAACTACAATTTCACAACTGAGGATGAGATATTGGTACCTACGGATATTGATGATATGGGAAATCTTGAGGAACTTATTGTCGCTCGAGAAGGGAATAATTGA 1845 0.4211 MVLSSRTFCTRVVIINFLLLLSCHMVYGTVTDIFCLKKIKDSLQDPNGYLKSSWDFNNNTEGFICRFTGVECWHPDENKVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSLNKLSGTIPADINKILTFVTTLDLSSNDFSGSIPVGLANCSYLNSLKLDQNRLTGQIPGEFSTLTRLKAFTVTNNLLTGPIPYLPNISGDSYVNNAGLCGTPLPTCQASSSKSNTAVIAGAAVGGVTVGALAIGIGLFFFVRRVAVIKKEEDPEGNKWARSLKGTKGIKVSMFEKSVSKMKLSDLMKATNNFSKGNIIGTGRTGTMYKAVLDDGTSLMVKRLQESQHSEKEFLSEMSTLGAVRHRNLVPLLGFCLAKKERLLVYRYMSNGYLHDQLHPAEGQSTLEWPTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDSDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGVVLLELVTGERPTYVAKAPETFKGSLVEWITQLSSSSELQTAIDESLGGKGFDNEVFQFLKVACNCVSSTPKERPTLFEVYQFLRSIGSNYNFTTEDEILVPTDIDDMGNLEELIVAREGNN 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0646 614 SUPERFAMILY L domain-like 31 194 - -
Prci12g0646 614 Gene3D Transferase(Phosphotransferase) domain 1 377 595 - -
Prci12g0646 614 CDD STKc_IRAK 308 576 - -
Prci12g0646 614 FunFam Nuclear pore complex protein NUP107 30 193 - -
Prci12g0646 614 ProSiteProfiles Protein kinase domain profile. 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0646 614 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 377 596 - -
Prci12g0646 614 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Prci12g0646 614 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Prci12g0646 614 Gene3D Phosphorylase Kinase; domain 1 263 376 - -
Prci12g0646 614 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Prci12g0646 614 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 263 376 - -
Prci12g0646 614 Gene3D Ribonuclease Inhibitor 31 218 IPR032675 -
Prci12g0646 614 Pfam Protein tyrosine and serine/threonine kinase 305 575 IPR001245 GO:0004672|GO:0006468
Prci12g0646 614 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 35 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0646 Prci-Chr12 5870737 5874182 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0646 12 590 Receptor kinase-like Gene Family AT3G28450 48.299 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Prci12g0646 PK_Tyr_Ser-Thr 4.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0646 - - gmx:100817267 935.25