Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0626 ATGGGAGGTGCTGGCAAAACAACCGTTGCCAAAGCAATCTACAATGAAATTGGTCGCCACTTTAAAAGAAGTTTCCTGAAAAATATTAGAGAAATTTCAAAGCAAGATAATGGCCACGTTATTTTGCAAAAACAACTTATTTATGATATAACTGGGAAAGAAGTTTTCAAGATATGTGACATTGATAGGGGAAAAAAAATAATTCAAGACAGATTTCCCCACATAAAAGCACTTGTTGTATTGGATGATGTGGATAGTATTTGTCAACTGAACGCATTATGTGAGAGTCGTGAATGGTTTTGTCCAAGGAGTGTAATAATCATCACAACTAGAGATATGCATCTGCTTAATGTCCTTAAAGCTGACTACAAATATGAAGTCAGAGAAATGGATGAAAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCCTTCAAGAAAAAAGCTCCCTTTGAAGAATTTATGGAACTCTCTAGAAGTGTAGTTGCTTATTGTGGAGGACTTCCACTTGCTCTTGAAGTCATTGGTTCTTATTTGTGTGAGAAAACAATTCAACAGTGGAAGGCTGCATTGTCCAAACTCGAAAGGATTCCTCATAAAGATATTCAAGCAAAGTTAAAAATAAGCTTTGATGGTTTAGATGATTATACAGAGAAGGAAATTTTCCTTGACATATGTTGCTTCTTTATCAATAGGGACAGAAACTATGTAACGCAGATATTAGATGGTTGTGGACTTCATGCAGAAAATGGACTACAAATTCTCATAGATCGGAGCCTCATAAAAGTTAGTAGGAATAATAAGCTTGAAATGCATGATTTATTACGGGATATGGGAAGAGAAATCATCCGTGATAGCCCACCTAAGGATCCAGAGGAATATAGCAGATTATGGATTCATGAAGATGTACTTGAAGTGTTAAGAGAACATACGGGAACGAAAGCTATTGAGGGTATATCTCTGAAGTTTCCAAGAACATATAAAGAGTGTTTGATTGATTCCGAGGCATTTAAGGCAATGAACAAACTTAGATTACTCCAACTAGATTATGTAAATCTTAAAGGAGATTATAAGCATCTTTCCAAAAAGTTGAGGTGGCTTTGTTGGCGTGGATTTCCTTTAAAATACATTCCAAACAACTTTCACCAAAAAAATTTAGTTGCTATTGACTTCAAATGCAGTAGGCTCGTAAGAGTTTGGAAAGAGCCCCAGTTGCTAGAAAGGTTGAAGACAATCAATCTCAGCCATTCCTCTTATTTGACACAGACTCCTGAATTTACAAAACTGCCAAACCTTGAAAAGTTGATACTAAAAGATTGTCCGAGCTTGATGTTAGTTCACAATAGTATTGGAGATCTGGAAAATCTTCTTGTGGTAAATCTAAAAGGCTGCAAGTGCCTTAGGCTTCTTCCTAGAAGCATCTACAAGTTGAAATCTTTAAAAACTCTTATTCTTTCTGGTTGTTCATTGATTGACCATTTAGAAGAAGATTTTGAGCAAATGGAATCCTTGACTGTTTTAATGGCAGATAATACTGCCATAACACAAGCACCCAGGTCATTAGCAAGATTGCAGGCGCTTGTACATGGATATGTATCTTTGTGTGGGTATGAAGGAAGAGCACAAGATGTATTTCCTTCTCTCATACAGTCTTGGATGTCACCCACAAATATTTTCCAATCCCATAGTGAAGCATTTTTGCAGGGCATATCATCTCTATTTTTCTCAGCTGTACAGATTGGTAGCTTCCATGGCCTATCTCCATTTCTAGGCAATCTTGCAAAGCTTCGAGGCATGTGGGAAGAATGTCGACCACAGTTTCAATTCAGTGAAAAAATGGCTAGACTTTTGGATGCCTTGTATCAGACAAATTTTATGGAATTGGAATCAACTTCACGTACACCACAGATCTCATATATGGAAGCCTCTGCATCATCATTTGAGGGTCATGTCCAAGTGTTTATTGCAAGTTCAGCAGATTCCTTCAACTCTCTTTTTGTTCAAATGGGATTGTGCACCAAAGTAGACTTATTGAAAGATAAAATTCTGCAGGGATGGAGTTATGGTGGGTGGGATGATTCTCAACTACCTGGCAATCAGTATCCTAATTGGTTCATCTACAAGGGTGAAGGATGCTCAGTAATTTTTAAGGTTCCTCTTGTCAAAGGTTGTCGCTTAAAAGCGATGCTTCTCAATGTTGTGCATTCTTCTTGCATGGATAACACAATGCCTGATCAATTTCTCATAAGTGTTCTGATCATCAACCACACGAAGGCTACTGTTCAACATTATAAAGGAGACTCGATAACTTTCCATGAAGATGAACAATGTCAAAGTATCATTTCAAATATTCAACCTGATGATTTAGTGGAACTTGTTTTTAGTATTGGGCCTCAATTTCCTGTGAAGAAGATTGCAGCATACCTAATTTTTGACGATTCCAAACCTCGTAGATTATTGAAATAA 2463 0.3707 MGGAGKTTVAKAIYNEIGRHFKRSFLKNIREISKQDNGHVILQKQLIYDITGKEVFKICDIDRGKKIIQDRFPHIKALVVLDDVDSICQLNALCESREWFCPRSVIIITTRDMHLLNVLKADYKYEVREMDESESLELFSWHAFKKKAPFEEFMELSRSVVAYCGGLPLALEVIGSYLCEKTIQQWKAALSKLERIPHKDIQAKLKISFDGLDDYTEKEIFLDICCFFINRDRNYVTQILDGCGLHAENGLQILIDRSLIKVSRNNKLEMHDLLRDMGREIIRDSPPKDPEEYSRLWIHEDVLEVLREHTGTKAIEGISLKFPRTYKECLIDSEAFKAMNKLRLLQLDYVNLKGDYKHLSKKLRWLCWRGFPLKYIPNNFHQKNLVAIDFKCSRLVRVWKEPQLLERLKTINLSHSSYLTQTPEFTKLPNLEKLILKDCPSLMLVHNSIGDLENLLVVNLKGCKCLRLLPRSIYKLKSLKTLILSGCSLIDHLEEDFEQMESLTVLMADNTAITQAPRSLARLQALVHGYVSLCGYEGRAQDVFPSLIQSWMSPTNIFQSHSEAFLQGISSLFFSAVQIGSFHGLSPFLGNLAKLRGMWEECRPQFQFSEKMARLLDALYQTNFMELESTSRTPQISYMEASASSFEGHVQVFIASSADSFNSLFVQMGLCTKVDLLKDKILQGWSYGGWDDSQLPGNQYPNWFIYKGEGCSVIFKVPLVKGCRLKAMLLNVVHSSCMDNTMPDQFLISVLIINHTKATVQHYKGDSITFHEDEQCQSIISNIQPDDLVELVFSIGPQFPVKKIAAYLIFDDSKPRRLLK 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0626 820 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 547 IPR044974 GO:0006952
Prci12g0626 820 PRINTS Disease resistance protein signature 71 85 - -
Prci12g0626 820 PRINTS Disease resistance protein signature 164 178 - -
Prci12g0626 820 PRINTS Disease resistance protein signature 474 490 - -
Prci12g0626 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
Prci12g0626 820 Gene3D Ribonuclease Inhibitor 287 599 IPR032675 -
Prci12g0626 820 FunFam Disease resistance protein (TIR-NBS-LRR class) 131 213 - -
Prci12g0626 820 Gene3D - 1 125 IPR027417 -
Prci12g0626 820 SUPERFAMILY L domain-like 329 596 - -
Prci12g0626 820 Gene3D - 129 213 IPR042197 -
Prci12g0626 820 SUPERFAMILY "Winged helix" DNA-binding domain 200 306 IPR036390 -
Prci12g0626 820 Pfam NB-ARC domain 1 202 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0626 Prci-Chr12 5614173 5618031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0626 419 533 WRKY Transcription Factor Family AT5G45050 33.043 5.15e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0626 - - pcin:129289419 1657.88