Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0612 ATGGCGATGAGAAACAGTGTGGTCTGCTTCTTTTTTTTCGTCTTACTTCACATTTTCTTGAGCGCCCTGCCAACCCAATCAGCCCCTGAAACTGCTCTCGTGACAGAGCTTCCTGGATTCAATGGCACTATACCTTCCAAGCACTACGCCGGCTACGTGACGGTGGATGAAAGTCAAGGGAGGAACCTGTATTACTATTTTGCTGAATCAGAAGGCAATCCATCTGAGGATCCAGTGGTTTTATGGCTCAACGGTGGACCAGGGTGCTCTAGCTTCGATGGGTTCGTGTATGAACATGGTCCTTTCAATTTTGAAAAGGCCAAAACCCGAGGATCCATGCCCACATTGCACCTCAATCCTTACAGCTGGTCCAAGGTTTCCAACATCATATATTTGGATTCTCCAACTGGTGTGGGGTTTTCTTACTCTAAAAATTCATTTGATTATCCAACTGGAGACCTAAGGACTGCTTCAGAGTCACACACCTTTCTCCTTAAGTGGTTTGAACTCTATCCTGAGTTCCTTTCTAATCCATTCTTCATCGCTGGGGAGTCATATGCCGGAATATATGTACCTACACTAGCTTATGAAGTAGCAAAAGGAATTGAAGCTGGTACAAAGCCCTACCTGAATTTCAAGGGATATTTGGTAGGAAATGGCTGTGCAGATGATCAATTTGATGGCAATGCTCTTGTTCCATTTGCCCATGGGATGGGTCTTATCTCAGATGAATTGTATGAGGAGACAAGATATGTGTGCAATGGTAATTACTATAATCCAGTGAATGACATTTGTCAAAAATTGATAGACAAAGTTAATGAGACGATTGATGGGATAAACATATACAACACTCTAGAACCATGCTATCATGGGCAAGAGACAGTAGAGGCTACAATATCCTCTATTAGGCTGCCGACCAGCTTCAAGCAGTTAGGCGCGACCAAGAGACCTCTACCAGTGAGAAAAAGAATGTTTGGTCGTTCTTGGCCCCTTAGAGCCCCTGTGAAAGATGGAATTGTACCCACTTGGCCGGAACTTAGCAGTAGCACCAGCATTCCATGCACTGATGATGAGGTTGCAACCACATGGCTGAACAATGCTACAGTTAGGAAAGCAATTCATACTGCATCGGAAAGTGATGTCAAAACTTGGACCATATGCACGGACAATATCGCACCTTACGTTCATGATGCTGGAAGCATGCTCAAATTCCACTGGCTTCTGACATCCAAAGGATATCGAGCACTTATATACAGTGGGGATCATGATATGTGTGTTCCATTCACTGGAACCCAAGCATGGACTAGCTCAATGGGATACAGAGTTGTGGATGAATGGAGGCCATGGATAGTCAATAATCAAGTTGCTGGTTATATCCAAGGATATGAGAAAAATCTCACTTTTATGACCATAAAGGGAGCTGGGCATACAGTTCCAGAATATAAGCCACAAGAGTCACTATATTTCTATAAGCGCTTTTTGGATGGATTGCCAATATGA 1500 0.436 MAMRNSVVCFFFFVLLHIFLSALPTQSAPETALVTELPGFNGTIPSKHYAGYVTVDESQGRNLYYYFAESEGNPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEKAKTRGSMPTLHLNPYSWSKVSNIIYLDSPTGVGFSYSKNSFDYPTGDLRTASESHTFLLKWFELYPEFLSNPFFIAGESYAGIYVPTLAYEVAKGIEAGTKPYLNFKGYLVGNGCADDQFDGNALVPFAHGMGLISDELYEETRYVCNGNYYNPVNDICQKLIDKVNETIDGINIYNTLEPCYHGQETVEATISSIRLPTSFKQLGATKRPLPVRKRMFGRSWPLRAPVKDGIVPTWPELSSSTSIPCTDDEVATTWLNNATVRKAIHTASESDVKTWTICTDNIAPYVHDAGSMLKFHWLLTSKGYRALIYSGDHDMCVPFTGTQAWTSSMGYRVVDEWRPWIVNNQVAGYIQGYEKNLTFMTIKGAGHTVPEYKPQESLYFYKRFLDGLPI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0612 499 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Prci12g0612 499 SUPERFAMILY alpha/beta-Hydrolases 34 498 IPR029058 -
Prci12g0612 499 Pfam Serine carboxypeptidase 38 496 IPR001563 GO:0004185|GO:0006508
Prci12g0612 499 Gene3D - 350 498 - -
Prci12g0612 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 466 479 IPR001563 GO:0004185|GO:0006508
Prci12g0612 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Prci12g0612 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Prci12g0612 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Prci12g0612 499 FunFam Carboxypeptidase 353 498 - -
Prci12g0612 499 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 483 IPR001563 GO:0004185|GO:0006508
Prci12g0612 499 Gene3D alpha/beta hydrolase 27 299 IPR029058 -
Prci12g0612 499 FunFam Carboxypeptidase 27 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0612 Prci-Chr12 5472971 5480274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0612 359 499 Calmodulin-binding Proteins AT2G22960 46.099 8.41e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0612 K16296 - gmx:100792057 781.941