Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0611 ATGGGAGGAGCCTGTATTACTATTTCGTTGAATCAGAAAGCAATCCATCTCAGGATCCTGTGGTTTTATGGCTTAACGGTGGACCTGGATGCTCTAGTTTCGATGCCTTCGTATACGAGCATGGTCTCCAACATTATATATTTGGATTCTCCTGCTGGAGTGGGGTTTTCTTTCTCAAAGAATGAATCTGATTACACAACTGGAGACATAAAGACTGCTGCAGACACTCACACCTTCCTCCTTAAGTGGTTTGAACTCTATCCTGAGTTCCTTTCTAACCCATTCTTCATCGCTGGAGAGTCGTATGCTGGAATTTATGTACCTACACTAGCTTATGAAGTAATGAAAGGAATTGATGCTGGTGCAAAGCCCAACCTGAATTTCAAGGGATATTTGGTTGGAAACGGCTGTACAGATGATGAATTTGATGGAAATGCTCTTGTTCCATTTGCGCATGGGATGGGTCTTATCTCGGATGAATTGTATGAGGAGGTTAGAGTTGAATGCAATGGGAATTTCTATAATCCATTGAATGAAAATTGTGCAAGCAAGTTAGCAAAAGTTGATCAGGAGATTGATGGGCTAAACATATATGACATTCTGGAACCATGCTATCATTGGCCAGAGACAGAGCAGACTAAACCAACCTATATTAGGTTGCCATCCAGTTTCAGGCAGTTAGGTGAGACTGAGAGACCTCTACCTGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCCCTTAGAGCTCCTGTGAGAGATGGAATTGTACCAACTTGGCCGCAACTTAGCAATAGCCACAATGTTCCATGCACTGATGACGAGGTTGCAAACTCATGGTTGAACAACGACAGAGTCAGGAAAGCAATTCACACTGCAGAGAAATCTGACGTCAGTCTTTGGGATTTATGCACGGACAATATTTTATATTACCATGATGCTGGGAGCATGATGAAGTTCCACAAGAACCTGACATCCAGAGGATATCGAGCACTTATATACAGCGGGGATCATGATATGTGTGTTCCATTCACTGGAAGTCAAGCATGGACTAGGTCAATGGGATACAAAGTTGTCGATGAATGGAGGCCGTGGATAGTCAATAATCAAGTTGCTGGCTATATACAAGGATATGATAAAAATCTCACATTTATGACCATAAAGGGAGCTGGACACACTGTTCCAGAATATAAGCCTCAAGAGTCATTGTATTTCTATAAACGCTTTCTGGATGGCTTGCCAATGTAG 1245 0.4241 MGGACITISLNQKAIHLRILWFYGLTVDLDALVSMPSYTSMVSNIIYLDSPAGVGFSFSKNESDYTTGDIKTAADTHTFLLKWFELYPEFLSNPFFIAGESYAGIYVPTLAYEVMKGIDAGAKPNLNFKGYLVGNGCTDDEFDGNALVPFAHGMGLISDELYEEVRVECNGNFYNPLNENCASKLAKVDQEIDGLNIYDILEPCYHWPETEQTKPTYIRLPSSFRQLGETERPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSNSHNVPCTDDEVANSWLNNDRVRKAIHTAEKSDVSLWDLCTDNILYYHDAGSMMKFHKNLTSRGYRALIYSGDHDMCVPFTGSQAWTRSMGYKVVDEWRPWIVNNQVAGYIQGYDKNLTFMTIKGAGHTVPEYKPQESLYFYKRFLDGLPM 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0611 414 ProSitePatterns Serine carboxypeptidases, serine active site. 97 104 IPR018202 GO:0004185
Prci12g0611 414 PRINTS Carboxypeptidase C serine protease (S10) family signature 48 58 IPR001563 GO:0004185|GO:0006508
Prci12g0611 414 PRINTS Carboxypeptidase C serine protease (S10) family signature 381 394 IPR001563 GO:0004185|GO:0006508
Prci12g0611 414 PRINTS Carboxypeptidase C serine protease (S10) family signature 83 108 IPR001563 GO:0004185|GO:0006508
Prci12g0611 414 Gene3D alpha/beta hydrolase 24 413 IPR029058 -
Prci12g0611 414 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 398 IPR001563 GO:0004185|GO:0006508
Prci12g0611 414 SUPERFAMILY alpha/beta-Hydrolases 42 413 IPR029058 -
Prci12g0611 414 Pfam Serine carboxypeptidase 42 411 IPR001563 GO:0004185|GO:0006508
Prci12g0611 414 FunFam Carboxypeptidase 269 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0611 Prci-Chr12 5466114 5471344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0611 275 414 Calmodulin-binding Proteins AT2G22960 47.857 3.27e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0611 K16296 - jre:108989165 634.795