Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0610 ATGGCTACGGCGAGCAGTGTGGTCTGCTTCTATTTCGTTCTGGTTAACATTTTCTTAACCTTTCGGCTAACTCAACCAGCTCCTGAAGGTGCTCTCGTAACCGAGATTCCTGGATTCAGTGGCACTATACCTTCCAAGCACTATGCCGGTTATGTGACGGTCGATGAAAGTCATGGGAGGAGCCTGTATTACTATTTCGTTGAATCAGAAAGCAATCCATCTCAGGATCCTGTGGTTTTATGGCTTAACGGTGGACCTGGATGCTCTAGTTTCGATGCCTTCGTATACGAGCATGGTCCTTTCAATTTTCAAAAGGCCAAAACCCAGGAATCCTTGCCCACATTGCACCTCAATCCATACAGCTGGTCGAAGGTCTCCAACATTATATATTTGGATTCTCCTGCTGGAGTGGGGTTTTCTTTCTCAAAGAATGAATCTGATTACACAACTGGAGACATAAAGACTGCTGCAGACACTCACACCTTCCTCCTTAAGTGGTTTGAACTCTATCCTGAGTTCCTTTCTAACCCATTCTTCATCGCTGGAGAGTCGTATGCTGGAATTTATGTACCTACACTAGCTTATGAAGTAATGAAAGGAATTGATGCTGGTGCAAAGCCCAACCTGAATTTCAAGGGATATTTGGTTGGAAACGGCTGTACAGATGATGAATTTGATGGAAATGCTCTTGTTCCATTTGCGCATGGGATGGGTCTTATCTCGGATGAATTGTATGAGGAGGTTAGAGTTGAATGCAATGGGAATTTCTATAATCCATTGAATGAAAATTGTGCAAGCAAGTTAGCAAAAGTTGATCAGGAGATTGATGGGCTAAACATATATGACATTCTGGAACCATGCTATCATTGGCCAGAGACAGAGCAGACTAAACCAACCTATATTAGGTTGCCATCCAGTTTCAGGCAGTTAGGTGAGACTGAGAGACCTCTACCTGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCCCTTAGAGCTCCTGTGAGAGATGGAATTGTACCAACTTGGCCGCAACTTAGCAATAGCCACAATGTTCCATGCACTGATGACGAGGTTGCAAACTCATGGTTGAACAACGACAGAGTCAGGAAAGCAATTCACACTGCAGAGAAATCTGACGTCAGTCTTTGGGATTTATGCACGGACAATATTTTATATTACCATGATGCTGGGAGCATGATGAAGTTCCACAAGAACCTGACATCCAGAGGATATCGAGCACTTATATACAGCGGGGATCATGATATGTGTGTTCCATTCACTGGAAGTCAAGCATGGACTAGGTCAATGGGATACAAAGTTGTCGATGAATGGAGGCCGTGGATAGTCAATAATCAAGTTGCTGGCTATATACAAGGATATGATAAAAATCTCACATTTATGACCATAAAGGGAGCTGGACACACTGTTCCAGAATATAAGCCTCAAGAGTCATTGTATTTCTATAAACGCTTTCTGGATGGCTTGCCAATGTAG 1494 0.4331 MATASSVVCFYFVLVNIFLTFRLTQPAPEGALVTEIPGFSGTIPSKHYAGYVTVDESHGRSLYYYFVESESNPSQDPVVLWLNGGPGCSSFDAFVYEHGPFNFQKAKTQESLPTLHLNPYSWSKVSNIIYLDSPAGVGFSFSKNESDYTTGDIKTAADTHTFLLKWFELYPEFLSNPFFIAGESYAGIYVPTLAYEVMKGIDAGAKPNLNFKGYLVGNGCTDDEFDGNALVPFAHGMGLISDELYEEVRVECNGNFYNPLNENCASKLAKVDQEIDGLNIYDILEPCYHWPETEQTKPTYIRLPSSFRQLGETERPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSNSHNVPCTDDEVANSWLNNDRVRKAIHTAEKSDVSLWDLCTDNILYYHDAGSMMKFHKNLTSRGYRALIYSGDHDMCVPFTGSQAWTRSMGYKVVDEWRPWIVNNQVAGYIQGYDKNLTFMTIKGAGHTVPEYKPQESLYFYKRFLDGLPM 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0610 497 Gene3D alpha/beta hydrolase 26 320 IPR029058 -
Prci12g0610 497 SUPERFAMILY alpha/beta-Hydrolases 33 496 IPR029058 -
Prci12g0610 497 FunFam Carboxypeptidase 26 310 - -
Prci12g0610 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 481 IPR001563 GO:0004185|GO:0006508
Prci12g0610 497 Pfam Serine carboxypeptidase 37 494 IPR001563 GO:0004185|GO:0006508
Prci12g0610 497 FunFam Carboxypeptidase 399 494 - -
Prci12g0610 497 Gene3D - 349 496 - -
Prci12g0610 497 FunFam Carboxypeptidase 352 496 - -
Prci12g0610 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Prci12g0610 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Prci12g0610 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Prci12g0610 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Prci12g0610 497 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0610 Prci-Chr12 5466114 5471987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0610 358 497 Calmodulin-binding Proteins AT2G22960 47.857 1.19e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0610 K16296 - qsa:O6P43_017005 840.106