Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0604 ATGGCTGAACAAGTCCCATATGGTGTGGCTACCAGCCTGATCAACACGTTGGCTTCATTGGCCTTTACAGAGATCGCATCCATTTATGGGGTCGAAGATGACATTGAAAGGCTGAAGGAAACTGTTGAAGCCATCAAAGCTGTGCTCGTTGATGCTGATCAAAAGCAGCAGAATGATGAACTCATCAAGCTTTGGATAAGGAAGCTCAAACAAGTTCTCTACGAAGCAGATGACTTGCTCGATGAACTCCACACTCAGCATTTGCTACACATGAGGGATGGAAAAGGAAAGGTACGCGACTTCTTTTCATCCTCGAATCCGATTGCTTTTCGCCTCAAAATTGCTCAGAATATTCCAAAGATTCGAAAGCAGTTTAATGATATTGCAGAAGATGTGGCTAGGTTGAATTTAGATCGGGGAGTTGTTGTGATGGGGCATGGTGAGAGTAACTTGAGGGAAACAAGCTCTTTTGTGTACCATGAGGATATTATTGGCAGGGAGGAAAACAGGAAGGACATAATTGAATTATTGCTGAATAGTAATAATGGCAATCAAAATGCTTTCTTGGTTGCTATTGTTGGTATTGGGGGTCTAGGTAAAACTACTCTTGCACAATTGGTGTTCAATGATGCTAGAGTGAAAAACTTTTTCACAAAGCAGATGTGGGTGTGTGTTTCTGAAGTCTTTGATGTCAAAGAACTTGTTAAAAAGATATTAAAATCATTAGTTGGCCGTATAAAGGATGATCACTCATTAGAATCGCTTCAATATAAACTTCAACAAAAATTAAGTGGCCAAAATTTTTTGCTAGTTTTGGATGATATTTGGAATGAGGATGGTGAAAAGTGGCAACATCTGAGACAATATTTAATGTGTGGTGTTGAAGGTAGTAGGATTTTGTTGACTACACGTCATCAATCGGTAGCCAACAACATGGGTGTTAGAATGCCATATGTTTTGAGAGGTTTGACAAATGATCAGTCTTGGACTTTGTTGAAAAGATTGGCATTTGATAATAATAAAGTAATCACCCAAAATCTTAAGTCTATTGGCAAAAAAATTGCTAAAAAATGTGCCGGGGTTCCACTGGGGATAAGAGTCATAGGAAGATTGTTGCAATCAAAATCAAATGAACGTGACTGGGAAGCTATCTTGAAAGGTGACTTTTGGAAGAAGTTATCTGAAAATAATGATTCAATTATGCCAATATTAAAGTTGAGCTATGACAGTTTGACAATTGAATTAAAACAGTGTCTAGCTTATTGTTCTTTATATCCAAAAGATTGGACATATGAAAAGGATAGTTTGATTGAATTGTGGATGGCACAAGGCTTCCTTGGATGTCAAGAGGAGCAACAATGTCTAGAGGATGTTGGTGAAGAGTATATTCATATTTTGTTGATGAAGTCATTCTTCCAAGATGTTGAGATGAATGAATATGGGGAAATACAATATTTTAAAATGCATGATTTGATGCATGACTTGTCCCAATTAGTTGCCGGCTCAGATTATTGCTCAAATTTTGAGGATAGGAAAAATGTTACAAGTAGCCCTATGCATGTTTCTTTTGAACAGCATAACTCCAATTGTTCATTAGACATGATGGGTGCAAGTAGATTGAGAACCATTCTTAAGACCAACAAAGTCTCTGGAATGAGTGATCCATCTAATTTATTAAAGTCCAGGCGCTTGCGAGGTCTAGATTTGTCATTATATAAGATGAGAGATATGCCTGAATCAATAGGTAAAATGAATCATTTGAGGTATCTAGATCTCTCTTATTGTCTCAGTTTGATAAGTTTGCCCAAAAGTATAAGCAACTTAGTCAATCTGCAAACATTGAAATTGCGTGGGTGTAGCAATATGAAATTTTCCATAGATATTGTCACAAAACTGATAAACTTGCGCCGACTTGATATAGAAAATTGTGAGGCCTTCGAAGATGGGATGCCAATCGGATTGTGCAAGATGACAACTCTGCAGAGTTTGTCAAATTTCGTAGTGGGGAATGACGATAAGAAGAGAAAGAAAGCCAAATTGAATGAATTGCAAGAACTTAACCTCAGAGGTACGTTAGTGATTAAGAATCTTGGTTTAGTCAAGGAAGTCAAGGAAGAGTCCAAGGATGTTAATTTGAAAGCAAAGAAGAACCTCATGTCTTTGACACTTGATTGGGGACATATAATAGAGGTGGAGAACGGTGATACTTTGCAATTATTGCGAAACCTTCGCCCTCATCCAAATCTGAAGGAATTGAATGTGCACGATTACTCTGGGGAAAGGCTTTCCAATTGGCTTCTGTCACTTAGAAATCTTGTTGAACTAACTATCTCAGGCTGTCGTAGCTGTGAATACTTGCCAGTGTTGGAAGGATTGATTTCTCTCAAGACGCTATGCATATCAAGTATGGATGCTTTGAAGTACATATGCTATGAAAGATGTTCCTCATCAATGGCAAAAGACACAACTAGCTTCTACCCATCTTTGGAGGATTTAAGTGTGAGTTTTTGTAAAAGATTGAGGGGATGGAAAAGGGAGACAGATGTGAAGAATAGTGGAAGAGATAATGAGAAGCATCATTCACTACCACCATTTTCTTGCCTTTCATCTTTAAAAATTTCACATTGCCCAAACTTGACTTGCATGCCTACCTTTCCAAATCTTGCGAGGCAACTCGAGTTTAGTAACTCTAACACAGAGCCATTGCTAGGCACATTAAAGATGAGTAGGACTGGGCCATCTACACCAAAAGAATTGGATGCGTCTTATTCTCTTTCCATGCTCAAGTATCTATGCATTGAGGAGATAGACATGAATGCATTTCCAGACGAATGGATGCAAAATTTTACCTCTCTTCAGCATCTTAGTATCAAGCGTTTATCAAGTCCAGAAAAACTATTTCATCAAATGCAACATTTATCTGCTACACTTGAACAACTCAGTATTTCAAACATTGACAAGCTTCATTCATTAAGGGCTAAGGACCTTCGTTGCCTTCATTCTCTCAAACGAATCGAGTTTGAATGGATTCTTAAACTCAAGGCTTTGCCGGAGTGGATTTGCGATCTCCAGTCACTCCGATCAATCTTTATTTCTGACTGTGAAAGCTTGAAGTCACTTCCAACACGAATGCGTTGTTGCCTCAATAATTTACATTCACTACATTTGAGTGGAGAAGATATGCCTTTAATGAAAAGATGTAAGAGAGAAACAGGAGCAGAGTGGCCTAACATTGCTCATATTCCAAATGTAGTGCTCGATTTCCGCAATTCTGAACGCGCAAACTTCTGA 3291 0.3829 MAEQVPYGVATSLINTLASLAFTEIASIYGVEDDIERLKETVEAIKAVLVDADQKQQNDELIKLWIRKLKQVLYEADDLLDELHTQHLLHMRDGKGKVRDFFSSSNPIAFRLKIAQNIPKIRKQFNDIAEDVARLNLDRGVVVMGHGESNLRETSSFVYHEDIIGREENRKDIIELLLNSNNGNQNAFLVAIVGIGGLGKTTLAQLVFNDARVKNFFTKQMWVCVSEVFDVKELVKKILKSLVGRIKDDHSLESLQYKLQQKLSGQNFLLVLDDIWNEDGEKWQHLRQYLMCGVEGSRILLTTRHQSVANNMGVRMPYVLRGLTNDQSWTLLKRLAFDNNKVITQNLKSIGKKIAKKCAGVPLGIRVIGRLLQSKSNERDWEAILKGDFWKKLSENNDSIMPILKLSYDSLTIELKQCLAYCSLYPKDWTYEKDSLIELWMAQGFLGCQEEQQCLEDVGEEYIHILLMKSFFQDVEMNEYGEIQYFKMHDLMHDLSQLVAGSDYCSNFEDRKNVTSSPMHVSFEQHNSNCSLDMMGASRLRTILKTNKVSGMSDPSNLLKSRRLRGLDLSLYKMRDMPESIGKMNHLRYLDLSYCLSLISLPKSISNLVNLQTLKLRGCSNMKFSIDIVTKLINLRRLDIENCEAFEDGMPIGLCKMTTLQSLSNFVVGNDDKKRKKAKLNELQELNLRGTLVIKNLGLVKEVKEESKDVNLKAKKNLMSLTLDWGHIIEVENGDTLQLLRNLRPHPNLKELNVHDYSGERLSNWLLSLRNLVELTISGCRSCEYLPVLEGLISLKTLCISSMDALKYICYERCSSSMAKDTTSFYPSLEDLSVSFCKRLRGWKRETDVKNSGRDNEKHHSLPPFSCLSSLKISHCPNLTCMPTFPNLARQLEFSNSNTEPLLGTLKMSRTGPSTPKELDASYSLSMLKYLCIEEIDMNAFPDEWMQNFTSLQHLSIKRLSSPEKLFHQMQHLSATLEQLSISNIDKLHSLRAKDLRCLHSLKRIEFEWILKLKALPEWICDLQSLRSIFISDCESLKSLPTRMRCCLNNLHSLHLSGEDMPLMKRCKRETGAEWPNIAHIPNVVLDFRNSERANF 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0604 1096 Gene3D - 408 498 IPR036388 -
Prci12g0604 1096 Pfam NB-ARC domain 170 409 IPR002182 GO:0043531
Prci12g0604 1096 SUPERFAMILY L domain-like 864 1082 - -
Prci12g0604 1096 Gene3D - 10 118 - -
Prci12g0604 1096 PANTHER DISEASE RESISTANCE PROTEIN RP 37 876 IPR044974 GO:0006952
Prci12g0604 1096 SUPERFAMILY L domain-like 487 888 - -
Prci12g0604 1096 CDD RX-CC_like 7 130 IPR038005 -
Prci12g0604 1096 FunFam Probable disease resistance protein At1g61300 146 317 - -
Prci12g0604 1096 Coils Coil 35 55 - -
Prci12g0604 1096 PRINTS Disease resistance protein signature 582 598 - -
Prci12g0604 1096 PRINTS Disease resistance protein signature 189 204 - -
Prci12g0604 1096 PRINTS Disease resistance protein signature 262 276 - -
Prci12g0604 1096 PRINTS Disease resistance protein signature 358 372 - -
Prci12g0604 1096 Gene3D Ribonuclease Inhibitor 512 671 IPR032675 -
Prci12g0604 1096 Gene3D Ribonuclease Inhibitor 673 901 IPR032675 -
Prci12g0604 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 422 IPR027417 -
Prci12g0604 1096 FunFam Probable disease resistance protein At1g63360 408 497 - -
Prci12g0604 1096 Gene3D - 149 317 IPR027417 -
Prci12g0604 1096 Gene3D Ribonuclease Inhibitor 902 1084 IPR032675 -
Prci12g0604 1096 Pfam Rx N-terminal domain 11 91 IPR041118 -
Prci12g0604 1096 Gene3D - 322 407 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0604 Prci-Chr12 5423353 5428561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0604 190 914 WRKY Transcription Factor Family AT5G45050 23.172 2.02e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0604 - - pcin:129289506 1217.6