Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0591 ATGGGGTTTCGTGGCGCGGGGAAGAATATGGTTCTGGCTCCTACTACAATTTGCACCTTTACTCAGAAAAATGGCCGAACAAGTTCCTTATGGTGTGGTTGTGAGTATCATCAACAGAAAGGCTCAGAGACACTGGAAGCCATCAAAGCTGTGCTTGTTGATGCAGAGCGAAAACAGCAGAACGACCAGCTCATCAAGCTATGGATAAGGAGGCTCAAACAAGTTCTTCTCAACGCAGATGACTTGCTTGATGATTTACAAACTGAACATTTGCTTCGCAAAAGAGATGGCAAAAGAAAGGTACGTGACTATTTCTCATCCTCAAATCCAATTGCCTTCCGCCTAAAAATTGCTCGCAAGATAAAAAAGATCAGAGAGCGATTTAATGCAGTTGCAGAAGATGTTTCTAAGTTGAATTTGCATTCAAGAGTTTTAGTAATGAGGCAGAATGAGAGTAACTGGAGGGAAACTAGTTCTAAGAATGAAGAGTATATCATTGGTAGGGATCAAAGCAAGAAGGAGATCATTGATTTACTGCTAAACATTGATAGCAATCAAAGTGTTTCCGTGATTGCCATTGTTGGGATGGGCGGCTTAGGTAAGACAGCTCTTGCCCAGCTGGTGTATAATAATGCTGAAGTGAACAAATTTTTCAATAAGCAAATGTGGGTGTGTGCTTCTGAAGAGTTCCATGTGAAAGCACTGGTTAAAAAAATATTAGAATCATCAATTGGTAGAGATGTAAATGACCAACAATTACAATTGCTTCAAAATAAACTTGAAGAGAATTTAAATGGCCAAAGATATTTGCTAGTCCTCGATGACGTTTGGAATGAAGATCAGGAAAAGTGGTTACATTTGAAAAAGTATTTGATGTGTGGTGTTGAAGGTAGTAAGATTTTAGTGACTACCCGTAATCAAATGGTAGCAAGATGCATGGGTGCAGAAAACCCATATGTTTTGAAAAGTCTAACAAATGATATGTCTTGGGTTTTGTTAAAAACTTTAACAATTGGACAAGAAGGAGTAATGAACCAAAACCTTGAGCCTATTGGCCAAAAAATTGTAGAGAAATGTGGAGGAGTACCGTTAGCAATAAGAGCTATGGGAAGTATGCTAAAATCCAAAATGGAGGAAAACAACTGGGAATCTATATTGGATGATGACTTTTGGAAGCTATATGAAAGTAATAATTCAATCATGCCTGTATTAAAACTAAGCTATGATCAACTGTCTTTTGAATTAAGACAGTGCTTTGCTTATTGTTCCTTATATGCAAAAAATTGGAGATATGATAAGGATGACTTGATTGAATTATGGATGGCACAGGGCTTTCTTGATAGTCAAAATGAAAAACAGTGTTTAGAAGATGTTGGCGAACAATATGTTTGTGTTTTGTTGATGAGGTCATTTCTTCAAGATGTTGAGATGAACGAATTTGGTGAAATAAAGTACTTTAAAATACACAATTTGGTACATGACCTCTTGCAATCTGTTGCAAGCTCTGATTATCAGTTATATAATGAGAGGAGAAAAATGGTTGCAACTCCTATGCATGTTTCCTTTGACTGTGATTCCAACTGTTTGTTAGATTTGTTGAATGCAAATAGATTGAGAACTATCCTTGGAATACAAAGACTACTGGAGATCAATCCCTCTAGTTTGTTAGACTTCAAATGCTTGCGGAGTCTAAACCTATCAGATAGTCTAAACATCAAAGATTTGCCTAACTCAATAGGTAAAATGAAGCATTTAAGATACCTTAATCTCTCTCATTGTGAGAATTTAACTAGCTTGCCCAACAGTGTAAGCAACCTAGTCAATTTGCAAACTCTGAAACTAATGGGATGTTATGCTCTTAGATTTTCCATAGATTGTGTCCCAAAGTTGGTCAACTTACGTCATCTTCGTATTAATAACTGTAAGGCCTTTGAATGTGGAATGCCAATTGGGCTGGAGAAATTAAATGCCCTGCAAAGTTTATCAGATTTCAGAGTGGGCAATGATACTGATAAGGAGAGAAAATATGCAAAACTGAATGAACTGAAAGAATTCAATCTTAAAGATGAATTATCTATTGAGAATCTCAACTTAGTAAGGGAAGTTGAAGAAGAGTTTAAGGATGTTAATTTGAAAGCAAAGAAGAACCTTAAGTCTCTGAGACTTGATTAG 2172 0.3656 MGFRGAGKNMVLAPTTICTFTQKNGRTSSLWCGCEYHQQKGSETLEAIKAVLVDAERKQQNDQLIKLWIRRLKQVLLNADDLLDDLQTEHLLRKRDGKRKVRDYFSSSNPIAFRLKIARKIKKIRERFNAVAEDVSKLNLHSRVLVMRQNESNWRETSSKNEEYIIGRDQSKKEIIDLLLNIDSNQSVSVIAIVGMGGLGKTALAQLVYNNAEVNKFFNKQMWVCASEEFHVKALVKKILESSIGRDVNDQQLQLLQNKLEENLNGQRYLLVLDDVWNEDQEKWLHLKKYLMCGVEGSKILVTTRNQMVARCMGAENPYVLKSLTNDMSWVLLKTLTIGQEGVMNQNLEPIGQKIVEKCGGVPLAIRAMGSMLKSKMEENNWESILDDDFWKLYESNNSIMPVLKLSYDQLSFELRQCFAYCSLYAKNWRYDKDDLIELWMAQGFLDSQNEKQCLEDVGEQYVCVLLMRSFLQDVEMNEFGEIKYFKIHNLVHDLLQSVASSDYQLYNERRKMVATPMHVSFDCDSNCLLDLLNANRLRTILGIQRLLEINPSSLLDFKCLRSLNLSDSLNIKDLPNSIGKMKHLRYLNLSHCENLTSLPNSVSNLVNLQTLKLMGCYALRFSIDCVPKLVNLRHLRINNCKAFECGMPIGLEKLNALQSLSDFRVGNDTDKERKYAKLNELKEFNLKDELSIENLNLVREVEEEFKDVNLKAKKNLKSLRLD 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0591 723 Coils Coil 69 89 - -
Prci12g0591 723 PRINTS Disease resistance protein signature 580 596 - -
Prci12g0591 723 PRINTS Disease resistance protein signature 190 205 - -
Prci12g0591 723 PRINTS Disease resistance protein signature 359 373 - -
Prci12g0591 723 PRINTS Disease resistance protein signature 263 277 - -
Prci12g0591 723 Pfam NB-ARC domain 169 409 IPR002182 GO:0043531
Prci12g0591 723 Gene3D Ribonuclease Inhibitor 531 723 IPR032675 -
Prci12g0591 723 SUPERFAMILY L domain-like 487 720 - -
Prci12g0591 723 Gene3D - 408 499 IPR036388 -
Prci12g0591 723 Gene3D - 23 122 - -
Prci12g0591 723 PANTHER DISEASE RESISTANCE PROTEIN RP 73 722 IPR044974 GO:0006952
Prci12g0591 723 FunFam Probable disease resistance protein At1g63360 408 498 - -
Prci12g0591 723 Pfam Rx N-terminal domain 29 100 IPR041118 -
Prci12g0591 723 Gene3D - 146 319 IPR027417 -
Prci12g0591 723 FunFam Probable disease resistance protein At1g61300 147 318 - -
Prci12g0591 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 422 IPR027417 -
Prci12g0591 723 Gene3D - 323 407 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0591 Prci-Chr12 5258390 5261070 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0591 188 446 WRKY Transcription Factor Family AT5G45050 26.766 6.59e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0591 - - pcin:129288330 1398.65