Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0568 ATGTCCGCCATGAACATCGGCGATGTGAGCCGCCTCCGCCACCGCACGTTTCCGGAGCTAGATTTTCAGGACATGAAGGTGATTTCCGCCGTTGGCCGCGGAGCTAAGGGCGTCGTGTTCGCGGCAAAGAGGAATGACGATGCGTTTGGGGAGTATTTCGCTTTGAAAGTGATCTCCAAGGCTTTGATTAAGAAGAAAGCGAAGGCGATGAGCAGCAACGATGAGGGCGAGTGCAAGAGGGTGTCGTTTGAACAGCAGGTTCTTCGTCATTTTGATCACCCGCTCTTGCCTAGGTTGCGAGGGGTTGTGGAAACCGAGAAGATCATAGGGTACGCCATTGATTACTGCCCCGGCGGCAATCTCCATTCTCTCCGGAAAAAGCAGACCGAGAAGATGTTTTCAGATGATACCATCAGGTTTTATGCTGTGGAATTGGTCCTCGCATTGGAGTATCTGCACAATTTGGGCATAGTGTATAGAGATTTGAAGCCAGAAAACGTACTGATCCAAGAAACTGGTCACATAATGCTCGTCGACTTCGATCTCTCCAAAAAACTAAACCCGAAATCTCCAGAATCCCAGAGCATCGCCTCGTCGCCGATTTCCCACTCTTCAAAGACGAAGACGATGAAGGACTTACGGAAGAAACGCTTCTTCCGATTCTACAGTTGCTCCATGCCAAGCCCTCGGTCGTACGAACCGGAAGTCTCACAGGAATTCCAGTGTGCGCCGCGGAGTGAGTCAGACTCGGTCGAGAAATCAAACTCGTTCGTTGGAACAGAGGAATACGTAGCACCCGAGGTAGTTTCTGGGAAGGGACATGACTTCGGAGTCGATTGGTGGTCACTCGGCGTCGTTTTATATGAGATGCTGTACGGAACGACGCCGTTTAGGGGAGAGAACAGGAAAGAAACGTTTTATCGGATTCTGACGAAGGAACCGGAGTTAACCGGAGAGAAGACGCCGTTGAGGGATTTGATCGGAAAATTGTTAGAGAAGGATCGTGACCGTCGGATCGATGTGGAAGGGATCAAGGGCCACGATTTCTTCAAAGGGGTTCAATGGGACTCGGTTTTGCAGATGGCGCGGCCGCCGTATATTCCGTTGAATGACGTAGGGGACACAAATGGGTTTAATAAAATTCAAGTGGAGGTATTTGTCCATGAGGTGTTCTTTGGAAAGGAAGGTGAGGAAGAAAAGGAAAAAAAGAAAGAAGAAAATAATAATGATAATGGAGAGAATAACAAGAACGTGTGGGTAGGGAAGTTGAGTCAGAATCACATTGAGAATGAGAATTTTTTAATTTTTTGA 1311 0.4828 MSAMNIGDVSRLRHRTFPELDFQDMKVISAVGRGAKGVVFAAKRNDDAFGEYFALKVISKALIKKKAKAMSSNDEGECKRVSFEQQVLRHFDHPLLPRLRGVVETEKIIGYAIDYCPGGNLHSLRKKQTEKMFSDDTIRFYAVELVLALEYLHNLGIVYRDLKPENVLIQETGHIMLVDFDLSKKLNPKSPESQSIASSPISHSSKTKTMKDLRKKRFFRFYSCSMPSPRSYEPEVSQEFQCAPRSESDSVEKSNSFVGTEEYVAPEVVSGKGHDFGVDWWSLGVVLYEMLYGTTPFRGENRKETFYRILTKEPELTGEKTPLRDLIGKLLEKDRDRRIDVEGIKGHDFFKGVQWDSVLQMARPPYIPLNDVGDTNGFNKIQVEVFVHEVFFGKEGEEEKEKKKEENNNDNGENNKNVWVGKLSQNHIENENFLIF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0568 436 MobiDBLite consensus disorder prediction 397 417 - -
Prci12g0568 436 SUPERFAMILY Protein kinase-like (PK-like) 26 374 IPR011009 -
Prci12g0568 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Prci12g0568 436 PANTHER FLIPPASE KINASE 1-RELATED 12 373 - -
Prci12g0568 436 Gene3D Phosphorylase Kinase; domain 1 369 378 - -
Prci12g0568 436 Gene3D Phosphorylase Kinase; domain 1 24 119 - -
Prci12g0568 436 Pfam Protein kinase domain 252 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0568 436 Pfam Protein kinase domain 27 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0568 436 Gene3D Transferase(Phosphotransferase) domain 1 120 191 - -
Prci12g0568 436 Gene3D Transferase(Phosphotransferase) domain 1 246 368 - -
Prci12g0568 436 FunFam Serine/threonine-protein kinase OXI1 252 369 - -
Prci12g0568 436 ProSiteProfiles Protein kinase domain profile. 25 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0568 436 FunFam Serine/threonine-protein kinase OXI1 120 188 - -
Prci12g0568 436 Coils Coil 395 415 - -
Prci12g0568 436 MobiDBLite consensus disorder prediction 189 208 - -
Prci12g0568 436 MobiDBLite consensus disorder prediction 189 206 - -
Prci12g0568 436 MobiDBLite consensus disorder prediction 397 411 - -
Prci12g0568 436 SMART serkin_6 25 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0568 Prci-Chr12 5090127 5091926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0568 20 436 AGC Kinase Gene Family AT3G25250 58.548 2.47e-157 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci12g0568 Pkinase 8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0568 K20714 - qsa:O6P43_026737 478.789