Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0560 ATGGCAGAACAAATTCCTTATGGTGTAATTGTGAATCTCATTGGCAGGTTGAGTTCATCAGCCTTCAGAGAGATTTCAAGGATTTATGGCGTCAAGAGTGAGATACAGAGACTTCAAGACACTGTTGCAACTGTTGAAGCTGTGCTTGTTGATGCTGAGCAAAGGCAGCAGAACGACAAGCTTGTCAAGCTGTGGATAAGGAGGCTCAAACAAGTTCTCTACAAAGCAGACGATTTGCTTGATGAACTCTATACTGAAGATTTGTTGCTCAAAAGAGATGGAAAAGGAAAGGTAGATGTCTTCTTTTCATCCGTAAATCCTATTGCTTTTCGTGTCAAAGTTGCTGATAACATTAAAAAGATAAGAGATGAATTCAATGCTATTGCTGAAGATGTGTCTAAGTTGAAATTAGTTGGGCGAGTTGCAGAAACGAGGCATAATGAGATCAATTATCAGAGGGAAACTAGTTCTTTTATGCAAGAGGATATCATTGGGAGGGAGGAAAGCAAGAAGGAAATAATTGATTTATTGTTAACTACCAATAGCAATGAAAATGTTTCTTTCATTGCTATTGTTGGCATTGGGGGTTTAGGAAAGACTACAGTTGCTCAATTGGTGTACAATGATGTTGAAGTTAAAAACTTTTTCAAAAAACAAATGTGGGTATGTGTTTCTGAAGAGTTTGATGTTAAGACACTTGTTAAAAAAATATTAGAATTATCCGTGGGCAGCAAAGTGGATGACCAGCAGTTAGAACTACTTCAAAATAAGCTTCAAGAGAATTTGAATGGCCAAAAGTATTTGTTAATCTTAGACGATGTGTGGAATCAGGATCATCAGAAGTGGTTAGATTTAAAAAAGTATTTGAAGTGTGGTGCTAAAGGTAGTAAGATTATAGTGACTACTCGTGACCATATGGTAGCAAGAAGCATGGGTGTAAAAACCCCGTATGCTTTGAAATATCTGACAAATGACCAATCTTGGAATTTGCTTAAAAGATTGACATTTGGGCAGGACACAATATTGTCCCACAACATAGAGTCCATTGGTCCAAAAATTGTGGACAAATTTGGAGGAATTCCACTAGCAATAAGAGCCATGGGAAGCTTGTTGCAATCGAAATTAGAGGATGTTGATTGGGAAGCCATCTTAGAAGATGATTTTTGGATGTTATCAGAAAGTAATAAGCCAGTAATATCAATACTAAAATTAAGCTATGATCACTTGTCAAGTGAAGTAAGACAATGTTTTGCTTATTGTTCTTTGTATCCAAAAGATTGGATATATAATAAAAATGACTTGATTAAACAATGGATGGCGCAAGGGTACCTTGAACGTCAAGATAAAAAAGAACATCCAGAAGATGTTGGTGAACGATATGTTAGCATTTTGTTGATGAGATCATTCTTTCAAGATGTCCAGATGAATGAATCTGGTGAAATACAATGTTTTAAAATGCATGATTTGATGCATGATCTCTCACAATCGGTTGGTGGCTCTGATTTTTTCTTTGATAATGAGGAGAGAAAATCTGTTGCAAGGCCTATGCATGTTAACTTTTCTTATAACTCTTCCCATTGTTCATTAGACTTATTAGATGCAAGTAGATTGCGAACTATGCTTGGGGTACGAGAAGTATCAGATGATGGTCCATCCAATTTGTTGAAGTTCAATTATCTGCGCAGTCTCAGTTTGTCAATTTGGGATATGAGAGTTTTGCCAAAGTCAATAGAAAAAATGAAGCATTTAAGATATCTTGATCTTTCTGATTGTCCCAATTTGAAGAGTTTGCCTCCAAGTGTAAGCAACCTAGTAAATTTGCAAACATTGAAGTTGAATGGTTGTGTTGCTCTTGAATTTTCTGTAGATGTTGTTACAAAGTTAATCAACTTGCGTCATCTTCACATTGAAAACTGTTATGCCTTTAGAAATGGGATGCCAATTGGCTTGGGCAGATTAACAACTTTGCAAAGTTTATCACATTTCACAGTGGGTGATGATGATGCTGATAAGGAGAGAAAGAATGCGCAATTGAATGAATTAAAAGGACTCAAGCTCAGAGATGAACTAGTTATTGAGAAGCTCAATTCAGTAAGGAATGTTGAAGTAGAGTCCAAGGATGTTAATTTGAAAGGAAAGAAAAACCTCAAGTCTTTGACTCTCAATTGGAAAGATGATATTGGAGTGGTGAAAAATAGTGATAGCTTGCAATTATTTGAAAACCTTTGTCCTCATTCAAATTTGAAAAAATTGGAAGTAAAATGCTACCCAGGGGTGAGGTTTTCAGGCTGGCTTTTGTCCCTTGCTAATCTTGTCGACTTGAATATATCTGATTGTGGGAATTGTCAATTCTTGCCAACGTTGGAAGGACTCGTTTCTCTCAAGTCTCTTCATATACGGAACATGAAAGCTTTGGAGTGCATATGTTATGAAGATTGTTCATCATCAATGGCTTCACATCGTACAACTAGCTTCTTCCCATCTTTGGAGAAATTAAAATTTCTTGGGTGTGAAAATTTGAGAGGATGGCAAAGAAAGGCTGAAGTAAATAATAGAACAGATGATGAGAATCATCATTCATTGCCTCCATTTCCATGTCTTTCATATTTATCAATTGAGAAATGCCCAAACTTGAGTTGCGTGCCTGCATTTCCAAATCTTGTTGAGGGCTTGGATTTGAGCAACTGTAGCATGAAGCCATTGATAGACACATTACAGATGAGCACAGCTCGATCACCCAAAGAAGAAGAATTATCATTACGCCCATCTCTATCCATGCTTGAGGATCTAGACATTGATGACATGGGCATAGAAGCTTTACCAGAGAAGTGGATGCAAAATCTCACCTCTCTGAAGAATCTTTCTATTTCATTCTCATCAAGTCAAGGAATTGTGCTTCGTCATATGAAACATCTGCCTGCTTCCCTTGAAGAATTCAGTACCTGGAACATGGACAACTTTGATTTACAAGGTTGTAGTGATGGCGAGGATTTTAGCACAGAGTTCCAAGACCTCCATTGCCTCCATTCACTTCAAGGTTTTTGTATTTATTCATGTGAAAATCTCAGAGCTTTACCAGAATGGATCTGCAATCTCCAATCACTTCGATTTATTGATATTCTGGGATGTCAAAATTTGGAGTCATTGCCTGAAGGTATGCATCGTCTTGCTAATTTGCATACACTTCGTCTCAATGGAGCTCCACTTTTAGCAGAAAAATGTGAAAGAGGAAGAGGTTCAGAATGGCCCAAAATTTCTCATCTCCCAAATATAGTGGTGGATTGGCGTCCAATCTAG 3297 0.3722 MAEQIPYGVIVNLIGRLSSSAFREISRIYGVKSEIQRLQDTVATVEAVLVDAEQRQQNDKLVKLWIRRLKQVLYKADDLLDELYTEDLLLKRDGKGKVDVFFSSVNPIAFRVKVADNIKKIRDEFNAIAEDVSKLKLVGRVAETRHNEINYQRETSSFMQEDIIGREESKKEIIDLLLTTNSNENVSFIAIVGIGGLGKTTVAQLVYNDVEVKNFFKKQMWVCVSEEFDVKTLVKKILELSVGSKVDDQQLELLQNKLQENLNGQKYLLILDDVWNQDHQKWLDLKKYLKCGAKGSKIIVTTRDHMVARSMGVKTPYALKYLTNDQSWNLLKRLTFGQDTILSHNIESIGPKIVDKFGGIPLAIRAMGSLLQSKLEDVDWEAILEDDFWMLSESNKPVISILKLSYDHLSSEVRQCFAYCSLYPKDWIYNKNDLIKQWMAQGYLERQDKKEHPEDVGERYVSILLMRSFFQDVQMNESGEIQCFKMHDLMHDLSQSVGGSDFFFDNEERKSVARPMHVNFSYNSSHCSLDLLDASRLRTMLGVREVSDDGPSNLLKFNYLRSLSLSIWDMRVLPKSIEKMKHLRYLDLSDCPNLKSLPPSVSNLVNLQTLKLNGCVALEFSVDVVTKLINLRHLHIENCYAFRNGMPIGLGRLTTLQSLSHFTVGDDDADKERKNAQLNELKGLKLRDELVIEKLNSVRNVEVESKDVNLKGKKNLKSLTLNWKDDIGVVKNSDSLQLFENLCPHSNLKKLEVKCYPGVRFSGWLLSLANLVDLNISDCGNCQFLPTLEGLVSLKSLHIRNMKALECICYEDCSSSMASHRTTSFFPSLEKLKFLGCENLRGWQRKAEVNNRTDDENHHSLPPFPCLSYLSIEKCPNLSCVPAFPNLVEGLDLSNCSMKPLIDTLQMSTARSPKEEELSLRPSLSMLEDLDIDDMGIEALPEKWMQNLTSLKNLSISFSSSQGIVLRHMKHLPASLEEFSTWNMDNFDLQGCSDGEDFSTEFQDLHCLHSLQGFCIYSCENLRALPEWICNLQSLRFIDILGCQNLESLPEGMHRLANLHTLRLNGAPLLAEKCERGRGSEWPKISHLPNIVVDWRPI 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0560 1098 PANTHER DISEASE RESISTANCE PROTEIN RP 43 875 IPR044974 GO:0006952
Prci12g0560 1098 Gene3D - 147 315 IPR027417 -
Prci12g0560 1098 FunFam Probable disease resistance protein At1g63360 406 495 - -
Prci12g0560 1098 Pfam Rx N-terminal domain 10 92 IPR041118 -
Prci12g0560 1098 Gene3D - 406 496 IPR036388 -
Prci12g0560 1098 Gene3D - 10 119 - -
Prci12g0560 1098 PRINTS Disease resistance protein signature 188 203 - -
Prci12g0560 1098 PRINTS Disease resistance protein signature 357 371 - -
Prci12g0560 1098 PRINTS Disease resistance protein signature 261 275 - -
Prci12g0560 1098 PRINTS Disease resistance protein signature 578 594 - -
Prci12g0560 1098 Gene3D Ribonuclease Inhibitor 675 886 IPR032675 -
Prci12g0560 1098 Gene3D Ribonuclease Inhibitor 516 665 IPR032675 -
Prci12g0560 1098 Gene3D Ribonuclease Inhibitor 887 1078 IPR032675 -
Prci12g0560 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 420 IPR027417 -
Prci12g0560 1098 SUPERFAMILY L domain-like 470 1086 - -
Prci12g0560 1098 Gene3D - 321 405 IPR042197 -
Prci12g0560 1098 Coils Coil 35 55 - -
Prci12g0560 1098 FunFam Probable disease resistance protein At1g61300 145 316 - -
Prci12g0560 1098 Pfam NB-ARC domain 167 407 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0560 Prci-Chr12 4957146 4961646 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0560 185 417 WRKY Transcription Factor Family AT5G45050 24.896 1.12e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0560 - - pcin:129289506 2178.67