Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0556 ATGATTTATGGGGTGAAGACTGAGATTGAAAGGCTCAGAGACACTGTTGAAGCCATCAAAGCTGTGCTTGTTGATGCTGAGCAAAAGCAGCAGAATGACCAGCCCATCAAGCTGTGGTTGAGGAGGCTCAGACAAGTGCTTTTCGAAGCAGATGACTTGCTCGATGAACTACACTCTAGAGATTTAATCTGCAAGAGAGATGGAAAAGCTAAGGGAAAGGGAAAGGTACGTGACTTCTTCTCATCCTCAAATCCGATTGCTTTTCGTCTCAAAGTTGCTCATAAGATTAAAAAGATCAGAGAGCGATTTGATGCTATCGCAGGAGAGATGTCTAGGTTGAATTTTGATAGAAGAGTTGTAGTGATGAGTTCTGAGGGGAGTAAGTGGAGGGAAACAAGTTCTGTTGTGCTTCAGGATGAGATCATTGGGAGGGAGGAAAGCAGAAGGGAGGTTATAGATTTGTTGCTGAATCCTGATGGCATTCAAAATGTTTCCCCAATTGCTGTTGTCGGCTTTGGGGGCTTAGGAAAGACTGCTCTTGCCCAGCTCGTATACAATGATGATGAAGTAAAGGAATTTTTCAATAAGACAATATGGGTGTGTGTTTCGGATGACTTTACTGTTAGAACACTTGTTCGAAATATATTAGAATCGTCCATTGGTCAAAAAGCGGACGACCAACAACTGGAACTTCTTCAGGATAAACTTCAGAAGGATCTGAATGGCAAAAAATATTTGCTTGTCTTAGATGATGTGTGGAATCAGGATCCCCATAAGTGGTCAGATTTAAAAAGATATTTGATGTGCGGAGCTCCTGGTAGCAAGATTTTAGTGACCACCCGTGATCAGATGGTGGCAAGAACAATGGGTGTGGAAATCCCATATAAGTTAAAAGGTTTGACAAGGGATCAGTCATGGACTTTGTTAAAAAGATTGGCATTTGGATCGAATAGGGTAACTTCCCAGAACATTGAGTCTCTCGGTCAAAAACTTGTTGACAAATGTGGAGGAATTCCACTAGCAATAAGAGCCATGGGAAGTCTATTGCAATTACAACAGACAGAGCGAATTGAGTGGGAAAGGATCTTAGAATGTGACTTTCGGAAGTTGTCTATAAGTAATGATCCAGTCATGCCAATACTACGACTAAGCTATGATCACTTGCCATTTGAATTGAGACAATGCTTTGCTTATTGTTCTTTGTATCCAAAAGACAGGAGATACGATAAGGATAAGTTGATTGAGCAATGGATGGCGCAAGGCTACCTTGGATGTCATGATGATGATGAATGTCTAGAAGATGTTGGTGAGCGATATGTTCAAATTTTGACAATGAGGTGTTTCTTTCAAGATATTTTGATGAATGAGTATGGTGAAATAAAATATTTTAAAATGCATGACTTAATGCATGACCTATCACAATTAGATGCTGGCTCCGATTGTTGTTTTTATGATGGGAGAAATTTTTTTGCCAGCCCGGTGCATATCAATTTTGCATATCGCTCCAAACTTTCTTTAGATTCATCGGATATAAGTAGACTGCGAACCATTCTTCGTCTACGCTATGTTTCAAAAAGTGATCTATCCATGCTATTAAAGTTCAGATGTTTGCGTAGTTTGGATTTGTCAAGAATGAATATGACAGATTTGCCTGATTCAATTGGTAAAATGATACACTTAAGATATCTTGATCTCTCTGATTGTGAAAAATTGACCAAGTTGCCCAAAAGTTTAAGCAACCTAGTCAACTTACAGACGCTCAAATTGACTGGTTGTCGGAGCTTGCTTGAACCTTCTTCTATAGATGTTGTCACAAAAATGATCAACTTGCGTCATCTTCACGTTGAAGGTTGTCGGGCCTTTTCATATGGAATGCCAATTGGGTTAGGCCGATTAACAAATCTACAAAGACTCTCGAGTTTCGTTGTGGGGGACCAATCATATAAGGAGGGAAAGCATGCAAAACTGAAGGAATTGAAAGAACTCAATCTCAGACATGAATTAGTTATTCGAAATCTGGATTTAGTAATGGATGTTGAAGACTCCAAGAATGCCAATCTGAAAGCAAAGAAAAACTTGAGGTCATTGTCACTCATATGCAGTGGAAATCACACAAGTAGTGATAGTTTTCAAGTTTTAGAAAACCTTTGTCCTCATCCAAATTTGAAACGATTGGAAATCGAGCGCTACCCAGGAGTGACGTTGTCAAGTTGGCTTGCTTCACTCACAAATCTTGTTGCGTTAGATCTTTCTGATTGTCCAAACTGTCAGTCATTGCCCCCGTTAGAAGGACTCGTTTCTCTCAAGGATCTTAATATGAGGTCCATGGATGCACTAGAGTACATATACTATGAAGGATGTTCCTCATCAACTAACTTCTTCCCATCTTTGGAAAATTTAACCGTTGATTCTTGTAAAATTTTGAGGGGATGGCAATGGAAGGCAGATGCAAATAATAGAATAGATGATGAGAAACAACTTCGGCTGCCTCCATTTCCTCGTCTTTCATATTTAAAAATCAGCCATTGTCCCAATTTGGATTGCATGCCTACACCTCCAAGTCTTGTGAAGTTGTGGTTTTTAGGTGATTGTAACATGAAGCCATTGATAGACACGGCAAAGGTAAGCTCAAAGTGGGTCGTCCACAACAAAAGAATTACATCCACCTCTTATCTTCCTGCTACACTTGAAGAGTTCGAAATTTGGCACATTGACAACCGTGATCCATGGAGTGGAGATGAAGATTTTAGCTCACAGCACCAAGCCCTTCGTTGCCTCCATTCTTTTTGCGATCTTAAAATCTTCATGTGTGATGAAAATTTCAAGGCTTTACCAGAGTGGATCTGCCATCTCCAATCACTTCAATCTATTGCCATTAAAAATTGTCCAAATTTGGAGTCATTGCCTGAAGGAATGCATCGCCTTACTAATTTACAAACACTAGAAATCTTCTTATCTCCACATTTAAAAAAAAAAAATGTGAGAGAGGAAGAGGTGCAGAATGGCCCAAAATTGCTCACATCCCTAATATATGGGCTTCACTCCGCAAGATCTGATCCTTCAATATCCATCCAAAGTTCTGTGCAGCTGGATGGATTTACGCATTTCGAATGCATTCATATAATTTTACTATATACAATGCCTAAAAGAGTCGATGTGATTGTAAAATCCACTCCTCAAAATTCATTTTTTTCCCATATTGTTCATTGCTTTCTGTTTTATTATTTTCTATATTCCAGTTTCTTTCAACTTTGA 3255 0.3923 MIYGVKTEIERLRDTVEAIKAVLVDAEQKQQNDQPIKLWLRRLRQVLFEADDLLDELHSRDLICKRDGKAKGKGKVRDFFSSSNPIAFRLKVAHKIKKIRERFDAIAGEMSRLNFDRRVVVMSSEGSKWRETSSVVLQDEIIGREESRREVIDLLLNPDGIQNVSPIAVVGFGGLGKTALAQLVYNDDEVKEFFNKTIWVCVSDDFTVRTLVRNILESSIGQKADDQQLELLQDKLQKDLNGKKYLLVLDDVWNQDPHKWSDLKRYLMCGAPGSKILVTTRDQMVARTMGVEIPYKLKGLTRDQSWTLLKRLAFGSNRVTSQNIESLGQKLVDKCGGIPLAIRAMGSLLQLQQTERIEWERILECDFRKLSISNDPVMPILRLSYDHLPFELRQCFAYCSLYPKDRRYDKDKLIEQWMAQGYLGCHDDDECLEDVGERYVQILTMRCFFQDILMNEYGEIKYFKMHDLMHDLSQLDAGSDCCFYDGRNFFASPVHINFAYRSKLSLDSSDISRLRTILRLRYVSKSDLSMLLKFRCLRSLDLSRMNMTDLPDSIGKMIHLRYLDLSDCEKLTKLPKSLSNLVNLQTLKLTGCRSLLEPSSIDVVTKMINLRHLHVEGCRAFSYGMPIGLGRLTNLQRLSSFVVGDQSYKEGKHAKLKELKELNLRHELVIRNLDLVMDVEDSKNANLKAKKNLRSLSLICSGNHTSSDSFQVLENLCPHPNLKRLEIERYPGVTLSSWLASLTNLVALDLSDCPNCQSLPPLEGLVSLKDLNMRSMDALEYIYYEGCSSSTNFFPSLENLTVDSCKILRGWQWKADANNRIDDEKQLRLPPFPRLSYLKISHCPNLDCMPTPPSLVKLWFLGDCNMKPLIDTAKVSSKWVVHNKRITSTSYLPATLEEFEIWHIDNRDPWSGDEDFSSQHQALRCLHSFCDLKIFMCDENFKALPEWICHLQSLQSIAIKNCPNLESLPEGMHRLTNLQTLEIFLSPHLKKKNVREEEVQNGPKLLTSLIYGLHSARSDPSISIQSSVQLDGFTHFECIHIILLYTMPKRVDVIVKSTPQNSFFSHIVHCFLFYYFLYSSFFQL 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0556 1084 CDD RX-CC_like 1 107 IPR038005 -
Prci12g0556 1084 PRINTS Disease resistance protein signature 335 349 - -
Prci12g0556 1084 PRINTS Disease resistance protein signature 166 181 - -
Prci12g0556 1084 PRINTS Disease resistance protein signature 239 253 - -
Prci12g0556 1084 PRINTS Disease resistance protein signature 740 756 - -
Prci12g0556 1084 Pfam Leucine rich repeat 537 593 IPR001611 GO:0005515
Prci12g0556 1084 Gene3D Ribonuclease Inhibitor 898 1006 IPR032675 -
Prci12g0556 1084 Coils Coil 9 29 - -
Prci12g0556 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 399 IPR027417 -
Prci12g0556 1084 FunFam Probable disease resistance protein At1g63360 385 474 - -
Prci12g0556 1084 Gene3D Ribonuclease Inhibitor 504 897 IPR032675 -
Prci12g0556 1084 Gene3D - 127 293 IPR027417 -
Prci12g0556 1084 Pfam NB-ARC domain 145 386 IPR002182 GO:0043531
Prci12g0556 1084 SUPERFAMILY L domain-like 464 861 - -
Prci12g0556 1084 Gene3D - 299 384 IPR042197 -
Prci12g0556 1084 Gene3D - 385 475 IPR036388 -
Prci12g0556 1084 Gene3D - 1 97 - -
Prci12g0556 1084 PANTHER DISEASE RESISTANCE PROTEIN RP 12 843 IPR044974 GO:0006952
Prci12g0556 1084 Pfam Rx N-terminal domain 3 69 IPR041118 -
Prci12g0556 1084 FunFam Probable disease resistance protein At1g61300 123 294 - -
Prci12g0556 1084 SUPERFAMILY RNI-like 818 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0556 Prci-Chr12 4885890 4889846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0556 167 346 WRKY Transcription Factor Family AT5G45050 27.128 2.63e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0556 - - pcin:129289506 1101.27