Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0515 ATGAACCAGAAGATGTTCTTGTCTCACCAAATGGCACCTTCACTGCTGGCTTCTATGCCATTGGTGAAAATGTATGTCTTCGCAATCTGGTTCACTCAACTTCCTCAATCTTCCCCAAACTCGAACGTGGTTTGGGTCGGCAACCGTGACCAACCTGTCAATGGAAAACGTTCATCACTTTCCCTCCTTAGATCAGGAAACCTTATCCTCTCCGATGCCGGACAGAGGAACGTGTGGTCAAGCGACACCTCTTCATCTTGGCCGACCAGATTGACTCTCAACGACAATGGAAATCTTGTACTCTATGAGATCCGTTCACAAGAGTCAAATGTTATATGGCAGAGCTTTGATTTCCCAACAGACACTCTCCTCCCTGGCCAACAACTCATGAATGACACACAGCTTGTCGCTTCGAGAAGTGACACCAACCTTTCCTCTGGCTTCTACAAGCTCTTCTTCGACGACAACAACGTTCTTCGCCTTCTCTATCACAGGTTCGACGTCTCGAGTGTGTATTGGCCAGCGCCGTGGATGTTGAGTTTTGAAGCTGGAAGGAGCGCAAACAATAGTAGCAGAGTCGCAGTGTTAGATTCTCTTGGAAGTTTCATTTCAACAGATAACTACAGATTTACGACTTCTGATTATGAGGTATCGACGCAAAGAAAATTGAAAATCGATCCTGATGGGAACCTTCGAGTGTATAGCTTACAGCAGAATGATCAATGGTTCGTGTCGTGGCAAGCTATAGCTGATTCTTGTCATGTCCATGGAATATGTGGAGTCAATAGCATGTGCAAGTACGATCATAGCATTAATAAAAGGAAGTGCTCGTGTCTGCCAGGATATAGAGTGAAGAACCATAGCGATTGGTCTTACGGGTGTGAACCCAAGTTTGAATTCTTATGTGGTCAAAATTTCTTAAAATTGCCCAGTGTTGAGTTCTACGGAAATGACCATGTCTATAAGCTAAACATTAGTTTCAAGAACTGCAAGGATTTGTGCATACAAGACTGCGAGTGCAAAGTTTTTCAGCACACATTCGGAGAAGACATAGGTCTATTTAGGTGCTATATCAAAAGAACTCTGGTCAGTGGGATTAATTCACCAATTTTTCGAGGAACAACCTACTTAAGACTGCCTAAATCCAGTACACCTTCGTTCCTTGAAGAAGAAGAATCTTCCCTTGATAGTGGTGACGTTTGTTTCGTGAAGCTTGAAAGAGCCTCAGAGCACGACAACAGTTTTGTCAAGTTTCTTCTTTGGTTTTCCATCGCTGTTGGGGTGCTTGAAGTCCTCTGTATATGTCTAATTTGGTGTTCTTTGATTAGACCCACAAAGGACTCTGATGCAAATCAACAAGTCTACAATTTTCTGTCTCCTTTTCGGTTCAGAAAATTTACTTACCCTGAGCTAAAACAAGCAACCAAAGGGTTCAGAGAAGAAATTGGAAGAGGAGCAGGTGGAATAGTGTACAAAGGAGTACTGTCAGATCAACGAGTCGCTGCAATAAAGAAGCTGACTGGTAATAATGTTGGAGGCAAGCAAGAAGAAGGAGAATTTATGGCTGAAGTAAGCATAATCGGTAGGCTCAACCATATGAACTTGATTGAAATGTGGGGGTATTGTGCTGAGGGAAAGCACAGGCTATTGGTGTACGAGTACATGGAAAATGGTTCTTTAGCAGATAATCTCAAATCAAACACCCTGGATTGGACCAAAAGGTACAACATTGCTCTGGGAACAGCAAGAGTACTAGCATACCTACACGAAGAATGCTTGGAGTGGATTCTGCATTGTGACATAAAGCCTCAGAATATCCTTCTGGATTCAAATTACCAGCCCAAGGTAGCAGATTTCGGCTTATCTAAGCTCAGAAATCGGAATGACCAAAACAGTCAGAGCTTCTCAATGATAAGAGGAACGCGGGGATATATGGCGCCAGAGTGGGTTTTCAATCTGCCAATAACATCGAAGGTGGATGTGTATAGTTATGGGATCGTTGTATTGGAGATGATGACAGGAAGGAGTTCCATGACGATGGAAGTTCATAGTGATGATGGAGAAGAGACTCAGAATGTGAGGCTTGTGACGTGGGTGAGAGAGAAGAAGAAGAAGACGACGTCAGAGGAAGGGTCGTCTTCACTGTGTTGGGTGGAGCAAATAATTGATCCAGCAATTGGATCAGAGTACGAGGCTGAGAAGAGGAAGATGGAAACTTTGGCAAGTGTAGCTTTGAAGTGCGTCATGGAAGACAAAGAGGCAAGGCCCACAATGAGCCAAGTTGTAGAAATGCTTCAGAGCCATGAAGACAATGCTTCTTAG 2322 0.4363 MNQKMFLSHQMAPSLLASMPLVKMYVFAIWFTQLPQSSPNSNVVWVGNRDQPVNGKRSSLSLLRSGNLILSDAGQRNVWSSDTSSSWPTRLTLNDNGNLVLYEIRSQESNVIWQSFDFPTDTLLPGQQLMNDTQLVASRSDTNLSSGFYKLFFDDNNVLRLLYHRFDVSSVYWPAPWMLSFEAGRSANNSSRVAVLDSLGSFISTDNYRFTTSDYEVSTQRKLKIDPDGNLRVYSLQQNDQWFVSWQAIADSCHVHGICGVNSMCKYDHSINKRKCSCLPGYRVKNHSDWSYGCEPKFEFLCGQNFLKLPSVEFYGNDHVYKLNISFKNCKDLCIQDCECKVFQHTFGEDIGLFRCYIKRTLVSGINSPIFRGTTYLRLPKSSTPSFLEEEESSLDSGDVCFVKLERASEHDNSFVKFLLWFSIAVGVLEVLCICLIWCSLIRPTKDSDANQQVYNFLSPFRFRKFTYPELKQATKGFREEIGRGAGGIVYKGVLSDQRVAAIKKLTGNNVGGKQEEGEFMAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLADNLKSNTLDWTKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLRNRNDQNSQSFSMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMMTGRSSMTMEVHSDDGEETQNVRLVTWVREKKKKTTSEEGSSSLCWVEQIIDPAIGSEYEAEKRKMETLASVALKCVMEDKEARPTMSQVVEMLQSHEDNAS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0515 773 FunFam Serine/threonine-protein kinase 555 773 - -
Prci12g0515 773 FunFam S-receptor-like serine/threonine-protein kinase 445 554 - -
Prci12g0515 773 ProSiteProfiles PAN/Apple domain profile. 302 383 IPR003609 -
Prci12g0515 773 SUPERFAMILY alpha-D-mannose-specific plant lectins 43 136 IPR036426 -
Prci12g0515 773 SUPERFAMILY Protein kinase-like (PK-like) 453 766 IPR011009 -
Prci12g0515 773 Gene3D Phosphorylase Kinase; domain 1 441 554 - -
Prci12g0515 773 SMART serkin_6 476 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0515 773 CDD PAN_AP_plant 302 380 - -
Prci12g0515 773 Pfam Protein kinase domain 480 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0515 773 CDD B_lectin 29 119 IPR001480 -
Prci12g0515 773 Pfam S-locus glycoprotein domain 204 285 IPR000858 GO:0048544
Prci12g0515 773 ProSiteProfiles Bulb-type lectin domain profile. 1 114 IPR001480 -
Prci12g0515 773 Gene3D Transferase(Phosphotransferase) domain 1 555 773 - -
Prci12g0515 773 ProSitePatterns Protein kinases ATP-binding region signature. 482 505 IPR017441 GO:0005524
Prci12g0515 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Prci12g0515 773 PANTHER OS07G0415500 PROTEIN 24 768 - -
Prci12g0515 773 Gene3D - 25 117 IPR036426 -
Prci12g0515 773 Gene3D - 120 249 IPR036426 -
Prci12g0515 773 ProSiteProfiles Protein kinase domain profile. 476 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0515 773 CDD STKc_IRAK 482 766 - -
Prci12g0515 773 Pfam D-mannose binding lectin 43 134 IPR001480 -
Prci12g0515 773 PIRSF SRK 15 773 IPR024171 GO:0004674
Prci12g0515 773 SMART blect_4 4 119 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0515 Prci-Chr12 4491500 4494258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0515 466 770 Trihelix Transcription Factor Family AT5G38560 40.000 1.47e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci12g0515 Pkinase 8.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0515 - - gmx:100783758 895.575