Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0455 ATGAAAGAACCTGAAACGAAAAAGGATGCCACCAAAGACATAGGCAGCAATAACATTGCTTCACAGAACTTCACCTTCCGGGATCTAGCAGTGGCCACGAAGAACTTCCGGCAAGAAACCCTAATTGGTGAAGGTGGATTCGGAAGGGTTTATAAAGGGCGAATCGAAAAAACCAACCAGGATGTAGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGAAACAGAGAGTTCCTTGTTGAAGTTTTGATGTTGAGCCTCTTGCATCATGAAAATCTAATGAATCTAGTTGGGTATTGTGCTGATGGAGATCAGAGACTTCTGGTGTACGAGTACATGCCATCTGGATCTGTAGAGGATCATCTTCTAGATGTCCCTCCTGATCAAAAGCCACTAGATTGGAATACAAGGATGAAAATAGCACTTGGAGCAGCAAAAGGATTAGAATATTTGCATGACAAGGCCAATCCACCCGTGATATATAGGGACTTGAAAGCAGCCAACATCTTGCTAGACAAGGATTTCAATGCAAAACTTTCAGATTTCGGACTAGCCAAGCTTGGACCTATGGGAGATAAGTCTCATGTGTCTTCTAGAGTAATGGGAACTTATGGATACTGTGCTCCAGAATATCAACGAACAGGTCAGCTTACCATAAAATCAGATGTGTATAGTTTTGGAGTTGTCTTGCTTGAATTGATCACTGGAAAAAGAGTGATTGACACAACAAGATCGACATGGGAACAAAACCTTGTTACTTGGGCCCAAACAATATTCAAGGATCCTCATAGACACCCAGAACTGGCAGATCCTCTTCTGAAAGGAAACTTTCCTGTAAAAGCACTGAGCCAAGCGGCGGCTATGGCAGCCATGTGCCTGAACGAGGAAGCTACCGCACGGCCACTAATCAGAGACGTAGTGAGTGCTCTCAGCTTTCTTGGGACAGACATTAATGATTCTCCAGAAGGTCTTGCTTCCGTTGACAGTCATGATGAAGATGATGATGATGACACTTCCTTGGAAGGCCAACATAATGCTGCTAAACCAACCGACACTACTGTTCAATGGGATGTTTAA 1077 0.4355 MKEPETKKDATKDIGSNNIASQNFTFRDLAVATKNFRQETLIGEGGFGRVYKGRIEKTNQDVAVKQLDRNGFQGNREFLVEVLMLSLLHHENLMNLVGYCADGDQRLLVYEYMPSGSVEDHLLDVPPDQKPLDWNTRMKIALGAAKGLEYLHDKANPPVIYRDLKAANILLDKDFNAKLSDFGLAKLGPMGDKSHVSSRVMGTYGYCAPEYQRTGQLTIKSDVYSFGVVLLELITGKRVIDTTRSTWEQNLVTWAQTIFKDPHRHPELADPLLKGNFPVKALSQAAAMAAMCLNEEATARPLIRDVVSALSFLGTDINDSPEGLASVDSHDEDDDDDTSLEGQHNAAKPTDTTVQWDV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0455 358 MobiDBLite consensus disorder prediction 321 358 - -
Prci12g0455 358 PANTHER OS07G0668900 PROTEIN 12 322 - -
Prci12g0455 358 FunFam Serine/threonine-protein kinase PBS1 7 112 - -
Prci12g0455 358 SUPERFAMILY Protein kinase-like (PK-like) 22 319 IPR011009 -
Prci12g0455 358 ProSiteProfiles Protein kinase domain profile. 36 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0455 358 Gene3D Transferase(Phosphotransferase) domain 1 113 325 - -
Prci12g0455 358 Pfam Protein kinase domain 37 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0455 358 Gene3D Phosphorylase Kinase; domain 1 5 112 - -
Prci12g0455 358 MobiDBLite consensus disorder prediction 343 358 - -
Prci12g0455 358 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Prci12g0455 358 SMART serkin_6 36 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0455 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Prci12g0455 358 PIRSF ILK 6 321 - -
Prci12g0455 358 CDD STKc_IRAK 42 310 - -
Prci12g0455 358 FunFam Serine/threonine-protein kinase PBS1 113 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0455 Prci-Chr12 4017613 4020054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0455 1 341 Glycoside Hydrolase AT3G07070 74.636 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci12g0455 Pkinase 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0455 - - zju:107426628 521.546