Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0452 ATGTTTAAGCATGATAGAAAAGGTCTTTTGTCCATATCAATTGCTGATCGTTATGGTATTGGTTCTCATTTTGCAATAACATTGAAACCCGATGACTATCTTGACAGGTTCAATGTGGTTTTTGGGCAGCTTGTTGATGGATTTGATACGTTGAGAAAGATTGAAGAGTTGCCTTCATTGCCTGTTGAAGCTGATGATTATGCTTCATTGGTCGCTGTTAAAGTTGACGATTGTGGGGTTTATATTGAAGGTAGTGAAAGCGAAACTGACAACAACAGTGATGATGAAAGTCTTGAAGATGTTCCATGGGGAAAGCGAAAGCGAATAGATCATTCTCAAAAGAATGCTGAAGTTAGGCGCCCCTTAACTAGGCTAACGGTATTGCCGATGCTTAAGCAGAAGAATCCCTTGGTTTTTATGGACGTCTGTATAGATGATCATTGTTGTGAAAGGATGATTTTTAAGCTATTCTATGATATAGCCCCCTTTACTGCAGAAAATTTCCGTGCGCTATGTACAGGAGAAAAGGGACTCAGTCCAAATGGTCAGGTACTGTGGTATGTAGGCTCTTTCTTTTATCCCATCGAGCAAGGTTGCTCCTATATCAAGGGGGGTGATATTTATGCTGGAGGGGACTTTCAAGAATTCACTTATACTTCAAGATGCCCAGAGGGATGTGGAGAAAGCATATATGGTTCAAACTTCCCAGATGAGTCACCTACTCTTGAGCATTCTAAAGAAGGTCTTTTGTCAATGTCAAAAGATGATTGCAAAAAATTTGGTTCTTTATTTGTGATCACATTGAAAGCTGATCCATCCCTTGACAGTTCATACGTGGTCTTTGGGGAGCTTATTGGTGGAAAACGCACACTGAATATGATTGGCGAATCTGGTTTTAAGCTACCTGTTCAAATCATCAAATGTGGTGGCTATATTGAAGGTTGA 945 0.4 MFKHDRKGLLSISIADRYGIGSHFAITLKPDDYLDRFNVVFGQLVDGFDTLRKIEELPSLPVEADDYASLVAVKVDDCGVYIEGSESETDNNSDDESLEDVPWGKRKRIDHSQKNAEVRRPLTRLTVLPMLKQKNPLVFMDVCIDDHCCERMIFKLFYDIAPFTAENFRALCTGEKGLSPNGQVLWYVGSFFYPIEQGCSYIKGGDIYAGGDFQEFTYTSRCPEGCGESIYGSNFPDESPTLEHSKEGLLSMSKDDCKKFGSLFVITLKADPSLDSSYVVFGELIGGKRTLNMIGESGFKLPVQIIKCGGYIEG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0452 314 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 79 IPR002130 GO:0000413|GO:0003755
Prci12g0452 314 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 150 309 IPR002130 GO:0000413|GO:0003755
Prci12g0452 314 Gene3D - 128 313 IPR029000 -
Prci12g0452 314 Gene3D - 1 90 IPR029000 -
Prci12g0452 314 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 139 294 IPR002130 GO:0000413|GO:0003755
Prci12g0452 314 SUPERFAMILY Cyclophilin-like 126 310 IPR029000 -
Prci12g0452 314 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 79 - -
Prci12g0452 314 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 80 IPR002130 GO:0000413|GO:0003755
Prci12g0452 314 SUPERFAMILY Cyclophilin-like 2 81 IPR029000 -
Prci12g0452 314 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 263 275 IPR002130 GO:0000413|GO:0003755
Prci12g0452 314 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 171 IPR002130 GO:0000413|GO:0003755
Prci12g0452 314 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 276 291 IPR002130 GO:0000413|GO:0003755
Prci12g0452 314 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 248 263 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0452 Prci-Chr12 3937386 3941974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0452 141 291 U-box Gene Family AT5G67530 32.237 1.58e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0452 K09566 - pcin:129288793 649.818