Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0451 ATGTTTAAGCATGATAGAAAAGGTCTTTTGTCCATATCAATTGCTGATCGTTATGGTATTGGTTCTCATTTTGCAATAACATTGAAACCCGATGACTATCTTGACAGGTTCAATGTGGTTTTTGGGCAGCTTGTTGATGGATTTGATACGTTGAGAAAGATTGAAGAGTTGCCTTCATTGCCTGTTGAAGCTGATGATTATGCTTCATTGGTCGCTGTTAAAGTTGACGATTGTGGGGTTTATATTGAAGGTAGTGAAAGCGAAACTGACAACAACAGTGATGATGAAAGTCTTGAAGATGTTCCATGGGGAAAGCGAAAGCGAATAGATCATTCTCAAAAGAATGCTGAAGTTAGGCGCCCCTTAACTAGGCTAACGGTATTGCCGATGCTTAAGCAGAAGAATCCCTTGGTTTTTATGGACGTCTGTATAGATGATCATTGTTGTGAAAGGATGATTTTTAAGCTATTCTATGATATAGCCCCCTTTACTGCAGAAAATTTCCGTGCGCTATGTACAGGAGAAAAGGGACTCAGTCCAAATGGTCAGGGGGGTGATATTTATGCTGGAGGGGACTTTCAAGAATTCACTTATACTTCAAGATGCCCAGAGGGATGTGGAGAAAGCATATATGGTTCAAACTTCCCAGATGAGTCACCTACTCTTGAGCATTCTAAAGAAGGTCTTTTGTCAATGTCAAAAGATGATTGCAAAAAATTTGGTTCTTTATTTGTGATCACATTGAAAGCTGATCCATCCCTTGACAGTTCATACGTGGTCTTTGGGGAGCTTATTGGTGGAAAACGCACACTGAATATGATTGGCGAATCTGGTTTTAAGCTACCTGTTCAAATCATCAAATGTGGTGGCTATATTGAAGGTTGA 885 0.3977 MFKHDRKGLLSISIADRYGIGSHFAITLKPDDYLDRFNVVFGQLVDGFDTLRKIEELPSLPVEADDYASLVAVKVDDCGVYIEGSESETDNNSDDESLEDVPWGKRKRIDHSQKNAEVRRPLTRLTVLPMLKQKNPLVFMDVCIDDHCCERMIFKLFYDIAPFTAENFRALCTGEKGLSPNGQGGDIYAGGDFQEFTYTSRCPEGCGESIYGSNFPDESPTLEHSKEGLLSMSKDDCKKFGSLFVITLKADPSLDSSYVVFGELIGGKRTLNMIGESGFKLPVQIIKCGGYIEG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0451 294 SUPERFAMILY Cyclophilin-like 2 81 IPR029000 -
Prci12g0451 294 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 171 IPR002130 GO:0000413|GO:0003755
Prci12g0451 294 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 228 243 IPR002130 GO:0000413|GO:0003755
Prci12g0451 294 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 256 271 IPR002130 GO:0000413|GO:0003755
Prci12g0451 294 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 243 255 IPR002130 GO:0000413|GO:0003755
Prci12g0451 294 Gene3D - 129 293 IPR029000 -
Prci12g0451 294 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 79 - -
Prci12g0451 294 SUPERFAMILY Cyclophilin-like 126 290 IPR029000 -
Prci12g0451 294 Gene3D - 1 90 IPR029000 -
Prci12g0451 294 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 139 274 IPR002130 GO:0000413|GO:0003755
Prci12g0451 294 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 80 IPR002130 GO:0000413|GO:0003755
Prci12g0451 294 MobiDBLite consensus disorder prediction 84 104 - -
Prci12g0451 294 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 150 289 IPR002130 GO:0000413|GO:0003755
Prci12g0451 294 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 79 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0451 Prci-Chr12 3937386 3941974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0451 141 271 U-box Gene Family AT5G67530 33.813 9.84e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0451 K09566 - pcin:129288793 593.578