Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0449 ATGGAAGAGAAGAAGCATCCCCGGGTTTTTATGGATATTTCTATACATAATAAACGTGTTGGAAAGTTGATTTTTGAGTTATTCGATGAGATTTTCCCCTACGCTGCAGAGAATTTTCGTGCGCTATGTACAGGAGAGAAGGGAATCAGCAGCAAATTAAAAGTGCCACTGCACTACAAGGGTACTTCCTTCTATCACATTGTGAAAGGTGGCTCCTTTGTGAAGGGGGGTACTTTATGGGATTCATTCGTGTCTACTCTCACACCTTTGCATCTCGTTTTTTATGGTTTAGCAGAGCTTGGAGATAGCATATATGGTTCTCAGTTCCCAAATGAGCCAGCTATGTTTAAGCATGATAGAAAAGGTCTTTTGTCCATATCAATTGCTGATCGTTATGCTATTGGTTCTCATTTTGCAATAACGTTGAAACCGGATGACTATCTTGACAGGTTCTATGTGGTTTTTGGGCAGCTTGTTGATGGATTTGATACATTGAGAAAGATTGAAGAGTTACCTTCATTGCCTATTGAAGCTGATGATTATGCTTCATTGGTAGCTGTTAAAGTTGATGATTGTGGGGTTTATATTGAAGGTAGTGATAGCAAAGCTGACGACAACCCTGATGATGAAAGCCTTGAAGATGTTGCAGGGGGAAAGCGAAAGCGTGTAGATCGTTCTCAAAAGAATGCTGAAATTTGCGCTCCCTTAGCTAGGCTAACGGTATCACCGTTGCCTAAGGAGAAGAATCCCATGGTTTTTATGGATGTCTCTATAGATGATCGTCGTTGTGAAAGAATGATTTTTAAGCTATTCTATGATGTCGCCCCCTTCACTGCAGAAAATTTCCGTGCACTATGTACAGGAGAAAAGGGACTTAGTCCTAGTGGTCAGATACTGTTTTATATAGGCTCTTTCTTTTATCCCATTGAGCAGGGTTGCTCCTATGTCAAGGGGGGTGATATTTATGCTGGAGGGGACTACCAAGAATTCACTTATACTTCAAGATGCCCAGAGGGATTTGGAGAAAGCATATATGGTTCAAATTTCCCAGATGAGTCACCTACTCTTGAGCATTCTAAAGCAGGTCTTTTGTCAATGTCAAAAGATGATTGCAAAAAATTTGGTTCTCTATTTGTGATCACATTGAAAGCTGATCCATCCCTTGACAGCTGGGGTGGGAATATGCATTGCCTGGTGTGCAAACATTGCATTTGA 1215 0.4091 MEEKKHPRVFMDISIHNKRVGKLIFELFDEIFPYAAENFRALCTGEKGISSKLKVPLHYKGTSFYHIVKGGSFVKGGTLWDSFVSTLTPLHLVFYGLAELGDSIYGSQFPNEPAMFKHDRKGLLSISIADRYAIGSHFAITLKPDDYLDRFYVVFGQLVDGFDTLRKIEELPSLPIEADDYASLVAVKVDDCGVYIEGSDSKADDNPDDESLEDVAGGKRKRVDRSQKNAEICAPLARLTVSPLPKEKNPMVFMDVSIDDRRCERMIFKLFYDVAPFTAENFRALCTGEKGLSPSGQILFYIGSFFYPIEQGCSYVKGGDIYAGGDYQEFTYTSRCPEGFGESIYGSNFPDESPTLEHSKAGLLSMSKDDCKKFGSLFVITLKADPSLDSWGGNMHCLVCKHCI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0449 404 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Prci12g0449 404 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 165 IPR002130 GO:0000413|GO:0003755
Prci12g0449 404 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Prci12g0449 404 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 149 IPR002130 GO:0000413|GO:0003755
Prci12g0449 404 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 77 IPR002130 GO:0000413|GO:0003755
Prci12g0449 404 MobiDBLite consensus disorder prediction 198 223 - -
Prci12g0449 404 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 253 404 IPR002130 GO:0000413|GO:0003755
Prci12g0449 404 SUPERFAMILY Cyclophilin-like 241 390 IPR029000 -
Prci12g0449 404 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 194 IPR002130 GO:0000413|GO:0003755
Prci12g0449 404 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 193 IPR002130 GO:0000413|GO:0003755
Prci12g0449 404 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 254 390 IPR002130 GO:0000413|GO:0003755
Prci12g0449 404 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 193 - -
Prci12g0449 404 SUPERFAMILY Cyclophilin-like 5 195 IPR029000 -
Prci12g0449 404 Gene3D - 1 195 IPR029000 -
Prci12g0449 404 Gene3D - 239 401 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0449 Prci-Chr12 3910887 3917872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0449 21 196 U-box Gene Family AT5G67530 27.119 9.30e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0449 K09566 - pcin:129288793 505.368