Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0448 ATGGAAGAGAAGAAGCATCCCCGGGTTTTTATGGATATTTCTATACATAATAAACGTGTTGGAAAGTTGATTTTTGAGTTATTCGATGAGATTTTCCCCTACGCTGCAGAGAATTTTCGTGCGCTATGTACAGGAGAGAAGGGAATCAGCAGCAAATTAAAAGTGCCACTGCACTACAAGGGTACTTCCTTCTATCACATTGTGAAAGGTGGCTCCTTTGTGAAGGGGGGTACTTTATGGGATTCATTCGCAGAGCTTGGAGATAGCATATATGGTTCTCAGTTCCCAAATGAGCCAGCTATGTTTAAGCATGATAGAAAAGGTCTTTTGTCCATATCAATTGCTGATCGTTATGCTATTGGTTCTCATTTTGCAATAACGTTGAAACCGGATGACTATCTTGACAGGTTCTATGTGGTTTTTGGGCAGCTTGTTGATGGATTTGATACATTGAGAAAGATTGAAGAGTTACCTTCATTGCCTATTGAAGCTGATGATTATGCTTCATTGGTAGCTGTTAAAGTTGATGATTGTGGGGTTTATATTGAAGGTAGTGATAGCAAAGCTGACGACAACCCTGATGATGAAAGCCTTGAAGATGTTGCAGGGGGAAAGCGAAAGCGTGTAGATCGTTCTCAAAAGAATGCTGAAATTTGCGCTCCCTTAGCTAGGCTAACGGTATCACCGTTGCCTAAGGAGAAGAATCCCATGGTTTTTATGGATGTCTCTATAGATGATCGTCGTTGTGAAAGAATGATTTTTAAGCTATTCTATGATGTCGCCCCCTTCACTGCAGAAAATTTCCGTGCACTATGTACAGGAGAAAAGGGACTTAGTCCTAGTGGTCAGATACTGTTTTATATAGGCTCTTTCTTTTATCCCATTGAGCAGGGTTGCTCCTATGTCAAGGGGGGTGATATTTATGCTGGAGGGGACTACCAAGAATTCACTTATACTTCAAGATGCCCAGAGGGATTTGGAGAAAGCATATATGGTTCAAATTTCCCAGATGAGTCACCTACTCTTGAGCATTCTAAAGCAGGTCTTTTGTCAATGTCAAAAGATGATTGCAAAAAATTTGGTTCTCTATTTGTGATCACATTGAAAGCTGATCCATCCCTTGACAGTTCATATGTGGTCTTCGGGGAGCTTATTGGTGGACAACGAACACTGGATATGATTGGAGAATATGGTTTTGAGCTACCTGTTCAAATCATCCAATGTGGTGCCTATACTGAAGTTGGAAGGTGA 1251 0.4093 MEEKKHPRVFMDISIHNKRVGKLIFELFDEIFPYAAENFRALCTGEKGISSKLKVPLHYKGTSFYHIVKGGSFVKGGTLWDSFAELGDSIYGSQFPNEPAMFKHDRKGLLSISIADRYAIGSHFAITLKPDDYLDRFYVVFGQLVDGFDTLRKIEELPSLPIEADDYASLVAVKVDDCGVYIEGSDSKADDNPDDESLEDVAGGKRKRVDRSQKNAEICAPLARLTVSPLPKEKNPMVFMDVSIDDRRCERMIFKLFYDVAPFTAENFRALCTGEKGLSPSGQILFYIGSFFYPIEQGCSYVKGGDIYAGGDYQEFTYTSRCPEGFGESIYGSNFPDESPTLEHSKAGLLSMSKDDCKKFGSLFVITLKADPSLDSSYVVFGELIGGQRTLDMIGEYGFELPVQIIQCGAYTEVGR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0448 416 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 240 409 IPR002130 GO:0000413|GO:0003755
Prci12g0448 416 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 179 IPR002130 GO:0000413|GO:0003755
Prci12g0448 416 MobiDBLite consensus disorder prediction 184 209 - -
Prci12g0448 416 SUPERFAMILY Cyclophilin-like 5 181 IPR029000 -
Prci12g0448 416 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 180 IPR002130 GO:0000413|GO:0003755
Prci12g0448 416 SUPERFAMILY Cyclophilin-like 227 411 IPR029000 -
Prci12g0448 416 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 239 394 IPR002130 GO:0000413|GO:0003755
Prci12g0448 416 Gene3D - 1 181 IPR029000 -
Prci12g0448 416 Gene3D - 225 411 IPR029000 -
Prci12g0448 416 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 179 - -
Prci12g0448 416 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 123 IPR002130 GO:0000413|GO:0003755
Prci12g0448 416 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 77 IPR002130 GO:0000413|GO:0003755
Prci12g0448 416 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 IPR002130 GO:0000413|GO:0003755
Prci12g0448 416 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 IPR002130 GO:0000413|GO:0003755
Prci12g0448 416 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0448 Prci-Chr12 3909254 3917872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0448 225 391 U-box Gene Family AT5G67530 29.762 5.90e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0448 K09566 - pcin:129288793 566.229