Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0447 ATGGAAGAGAAGAAGCATCCCCGGGTTTTTATGGATATTTCTATACATAATAAACGTGTTGGAAAGTTGATTTTTGAGTTATTCGATGAGATTTTCCCCTACGCTGCAGAGAATTTTCGTGCGCTATGTACAGGAGAGAAGGGAATCAGCAGCAAATTAAAAGTGCCACTGCACTACAAGGGTACTTCCTTCTATCACATTGTGAAAGGTGGCTCCTTTGTGAAGGGGGGTACTTTATGGGATTCATTCGAGCTTGGAGATAGCATATATGGTTCTCAGTTCCCAAATGAGCCAGCTATGTTTAAGCATGATAGAAAAGGTCTTTTGTCCATATCAATTGCTGATCGTTATGCTATTGGTTCTCATTTTGCAATAACGTTGAAACCGGATGACTATCTTGACAGGTTCTATGTGGTTTTTGGGCAGCTTGTTGATGGATTTGATACATTGAGAAAGATTGAAGAGTTACCTTCATTGCCTATTGAAGCTGATGATTATGCTTCATTGGTAGCTGTTAAAGTTGATGATTGTGGGGTTTATATTGAAGGTAGTGATAGCAAAGCTGACGACAACCCTGATGATGAAAGCCTTGAAGATGTTGCAGGGGGAAAGCGAAAGCGTGTAGATCGTTCTCAAAAGAATGCTGAAATTTGCGCTCCCTTAGCTAGGCTAACGGTATCACCGTTGCCTAAGGAGAAGAATCCCATGGTTTTTATGGATGTCTCTATAGATGATCGTCGTTGTGAAAGAATGATTTTTAAGCTATTCTATGATGTCGCCCCCTTCACTGCAGAAAATTTCCGTGCACTATGTACAGGAGAAAAGGGACTTAGTCCTAGTGGTCAGATACTGTTTTATATAGGCTCTTTCTTTTATCCCATTGAGCAGGGTTGCTCCTATGTCAAGGGGGGTGATATTTATGCTGGAGGGGACTACCAAGAATTCACTTATACTTCAAGATGCCCAGAGGGATTTGGAGAAAGCATATATGGTTCAAATTTCCCAGATGAGTCACCTACTCTTGAGCATTCTAAAGCAGGTCTTTTGTCAATGTCAAAAGATGATTGCAAAAAATTTGGTTCTCTATTTGTGATCACATTGAAAGCTGATCCATCCCTTGACAGTTCATATGTGGTCTTCGGGGAGCTTATTGGTGGACAACGAACACTGGATATGATTGGAGAATATGGTTTTGAGCTACCTGTTCAAATCATCCAATGTGGTGCCTATACTGAAGTTGGAAGGTGA 1248 0.4087 MEEKKHPRVFMDISIHNKRVGKLIFELFDEIFPYAAENFRALCTGEKGISSKLKVPLHYKGTSFYHIVKGGSFVKGGTLWDSFELGDSIYGSQFPNEPAMFKHDRKGLLSISIADRYAIGSHFAITLKPDDYLDRFYVVFGQLVDGFDTLRKIEELPSLPIEADDYASLVAVKVDDCGVYIEGSDSKADDNPDDESLEDVAGGKRKRVDRSQKNAEICAPLARLTVSPLPKEKNPMVFMDVSIDDRRCERMIFKLFYDVAPFTAENFRALCTGEKGLSPSGQILFYIGSFFYPIEQGCSYVKGGDIYAGGDYQEFTYTSRCPEGFGESIYGSNFPDESPTLEHSKAGLLSMSKDDCKKFGSLFVITLKADPSLDSSYVVFGELIGGQRTLDMIGEYGFELPVQIIQCGAYTEVGR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0447 415 SUPERFAMILY Cyclophilin-like 5 180 IPR029000 -
Prci12g0447 415 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 77 IPR002130 GO:0000413|GO:0003755
Prci12g0447 415 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Prci12g0447 415 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Prci12g0447 415 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Prci12g0447 415 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Prci12g0447 415 SUPERFAMILY Cyclophilin-like 226 410 IPR029000 -
Prci12g0447 415 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 178 - -
Prci12g0447 415 Gene3D - 1 180 IPR029000 -
Prci12g0447 415 Gene3D - 224 410 IPR029000 -
Prci12g0447 415 MobiDBLite consensus disorder prediction 183 208 - -
Prci12g0447 415 Coils Coil 415 415 - -
Prci12g0447 415 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 178 IPR002130 GO:0000413|GO:0003755
Prci12g0447 415 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 239 408 IPR002130 GO:0000413|GO:0003755
Prci12g0447 415 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 179 IPR002130 GO:0000413|GO:0003755
Prci12g0447 415 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 238 393 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0447 Prci-Chr12 3909254 3917872 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0447 224 390 U-box Gene Family AT5G67530 29.762 6.24e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0447 K09566 - pcin:129288793 566.229