Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0446 ATGGAAGAGAAGAAGCATCCCCGGGTTTTTATGGATATTTCTATACATAATAAACGTGTTGGAAAGTTGATTTTTGAGTTATTCGATGAGATTTTCCCCTACGCTGCAGAGAATTTTCGTGCGCTATGTACAGGAGAGAAGGGAATCAGCAGCAAATTAAAAGTGCCACTGCACTACAAGGGTACTTCCTTCTATCACATTGTGAAAGGTGGCTCCTTTGTGAAGGGGGGTACTTTATGGGATTCATTCGTGTCTACTCTCACACCTTTGCATCTCGTTTTTTATGGTTTAGCAGAGCTTGGAGATAGCATATATGGTTCTCAGTTCCCAAATGAGCCAGCTATGTTTAAGCATGATAGAAAAGGTCTTTTGTCCATATCAATTGCTGATCGTTATGCTATTGGTTCTCATTTTGCAATAACGTTGAAACCGGATGACTATCTTGACAGGTTCTATGTGGTTTTTGGGCAGCTTGTTGATGGATTTGATACATTGAGAAAGATTGAAGAGTTACCTTCATTGCCTATTGAAGCTGATGATTATGCTTCATTGGTAGCTGTTAAAGTTGATGATTGTGGGGTTTATATTGAAGGTAGTGATAGCAAAGCTGACGACAACCCTGATGATGAAAGCCTTGAAGATGTTGCAGGGGGAAAGCGAAAGCGTGTAGATCGTTCTCAAAAGAATGCTGAAATTTGCGCTCCCTTAGCTAGGCTAACGGTATCACCGTTGCCTAAGGAGAAGAATCCCATGGTTTTTATGGATGTCTCTATAGATGATCGTCGTTGTGAAAGAATGATTTTTAAGCTATTCTATGATGTCGCCCCCTTCACTGCAGAAAATTTCCGTGCACTATGTACAGGAGAAAAGGGACTTAGTCCTAGTGGTCAGATACTGTTTTATATAGGCTCTTTCTTTTATCCCATTGAGCAGGGTTGCTCCTATGTCAAGGGGGGTGATATTTATGCTGGAGGGGACTACCAAGAATTCACTTATACTTCAAGATGCCCAGAGGGATTTGGAGAAAGCATATATGGTTCAAATTTCCCAGATGAGTCACCTACTCTTGAGCATTCTAAAGCAGGTCTTTTGTCAATGTCAAAAGATGATTGCAAAAAATTTGGTTCTCTATTTGTGATCACATTGAAAGCTGATCCATCCCTTGACAGTTCATATGTGGTCTTCGGGGAGCTTATTGGTGGACAACGAACACTGGATATGATTGGAGAATATGGTTTTGAGCTACCTGTTCAAATCATCCAATGTGGTGCCTATACTGAAGTTGGAAGGTGA 1293 0.4084 MEEKKHPRVFMDISIHNKRVGKLIFELFDEIFPYAAENFRALCTGEKGISSKLKVPLHYKGTSFYHIVKGGSFVKGGTLWDSFVSTLTPLHLVFYGLAELGDSIYGSQFPNEPAMFKHDRKGLLSISIADRYAIGSHFAITLKPDDYLDRFYVVFGQLVDGFDTLRKIEELPSLPIEADDYASLVAVKVDDCGVYIEGSDSKADDNPDDESLEDVAGGKRKRVDRSQKNAEICAPLARLTVSPLPKEKNPMVFMDVSIDDRRCERMIFKLFYDVAPFTAENFRALCTGEKGLSPSGQILFYIGSFFYPIEQGCSYVKGGDIYAGGDYQEFTYTSRCPEGFGESIYGSNFPDESPTLEHSKAGLLSMSKDDCKKFGSLFVITLKADPSLDSSYVVFGELIGGQRTLDMIGEYGFELPVQIIQCGAYTEVGR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0446 430 MobiDBLite consensus disorder prediction 198 223 - -
Prci12g0446 430 Gene3D - 1 195 IPR029000 -
Prci12g0446 430 Gene3D - 239 425 IPR029000 -
Prci12g0446 430 SUPERFAMILY Cyclophilin-like 5 195 IPR029000 -
Prci12g0446 430 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 194 IPR002130 GO:0000413|GO:0003755
Prci12g0446 430 SUPERFAMILY Cyclophilin-like 241 425 IPR029000 -
Prci12g0446 430 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Prci12g0446 430 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 77 IPR002130 GO:0000413|GO:0003755
Prci12g0446 430 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 149 IPR002130 GO:0000413|GO:0003755
Prci12g0446 430 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 165 IPR002130 GO:0000413|GO:0003755
Prci12g0446 430 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Prci12g0446 430 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 253 408 IPR002130 GO:0000413|GO:0003755
Prci12g0446 430 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 193 - -
Prci12g0446 430 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 254 423 IPR002130 GO:0000413|GO:0003755
Prci12g0446 430 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 193 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0446 Prci-Chr12 3909254 3917872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0446 239 405 U-box Gene Family AT5G67530 29.762 6.28e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0446 K09566 - pcin:129288793 566.229