Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0440 ATGGAGACTCTCATAAGTACCATTGCTGAAAAAGTTGTAGAACCGATAGTAGACTACACTGTGGCACCCATTGCAAGGCAAGTGGGTTATTTGATTTTCTACAAAGACAATTTCACGAATCTCAAGGATCAGCTTGCGGAGCTCAAGACCATAAAGGAAACTATCAATCGTGAAGTGGAAGCAGAAAGAAGAAATGGATATCAAATTAATGATGCTGTAAAGAACTGGCTAGAGAAAGTGGATGAAACCATTGAAGCAGCCAAAAAACTTAGTGATGATCCTCATCATAGTAATGCTGGTTGCTGCAGGGGGCCTTTTCCTGATTTAAAGTCACGGCATCAACTAAGTAGAAAAGCAAAGAAAATGTCTAGAAACGTTGATGAAGTAATGCAAAGAAAAGACAATATTAAACCGCTTGGATACTTGCCTGCTTTAGAAGGAGTAGGCTCCACTTCCGCTACGAGTAGTGAGAAGCTTGAGTCAAGAAAGAAAATGAAGGAGGACATTGTCTTGGCTCTAAAAGACCCTAACTTAAGCCAGGTAGGGGTCTATGGGCTTGGTGGAGTGGGAAAAACCACTCTAGTTAAAGAAATTGCTAAACAAGTCAAAGATGAGAATTTGTTTGATGAAGTTGTAATGGCTCATATATCCCAAACTCCAGATCTAGAAAAAATTCAACGTGAAATTGCAGATTTTTTGGGCCTTCGCTTTGAAGAGACAACTATAGTTGGAAGAGCAAGTCGCCTCCGGCAAAGGATTAAAAGTGAGAAAAGTATCCTAGTCATATTGGATGATCTTTGGTCAACACTTGATTTAGATAAGCTAGGAATTTCTTTGAAGGATCACAAGGGATGCAAACTATTGTTGACTTCGAGGAATCTAGATATATTACAAAAAATGGAGACACAAAAAGACTTCTTGGTAGATGTTTTAAATGAAGATGAGTCTTGGAGCTTGTTTGAAGATATGGTGGGTGATGTTGTTAAAGATGATAATTTGCGTAGCGTGGCAATTCAAGTGGCCCAAAAATGTGCAGGCTTGCCTGTCCTTACAGTGATAGTGGCAAGAGCATTAAAAAATAAAGGTAGTATTAATTCTTGGAAGGATTCTTTAAACCAACTAAAGACTGTTGATAAGGAAGGAATGAATGGGATAATTTATTCGGCTCTGGAGTTTAGTTACAATCATCTTGAGAATGATGAACTGAAGGCACTTTTCTTGCTCTGTGGAGTCATAAGTTCATCATCAAATGAATACTTGATGAAATGTGCTATAGGTCTGGGCATATTCAAGCACGTTACTACATAA 1308 0.3846 METLISTIAEKVVEPIVDYTVAPIARQVGYLIFYKDNFTNLKDQLAELKTIKETINREVEAERRNGYQINDAVKNWLEKVDETIEAAKKLSDDPHHSNAGCCRGPFPDLKSRHQLSRKAKKMSRNVDEVMQRKDNIKPLGYLPALEGVGSTSATSSEKLESRKKMKEDIVLALKDPNLSQVGVYGLGGVGKTTLVKEIAKQVKDENLFDEVVMAHISQTPDLEKIQREIADFLGLRFEETTIVGRASRLRQRIKSEKSILVILDDLWSTLDLDKLGISLKDHKGCKLLLTSRNLDILQKMETQKDFLVDVLNEDESWSLFEDMVGDVVKDDNLRSVAIQVAQKCAGLPVLTVIVARALKNKGSINSWKDSLNQLKTVDKEGMNGIIYSALEFSYNHLENDELKALFLLCGVISSSSNEYLMKCAIGLGIFKHVTT 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0440 435 Coils Coil 73 93 - -
Prci12g0440 435 FunFam Probable disease resistance protein At1g61300 148 305 - -
Prci12g0440 435 Pfam NB-ARC domain 163 395 IPR002182 GO:0043531
Prci12g0440 435 Coils Coil 38 65 - -
Prci12g0440 435 SMART AAA_5 177 314 IPR003593 GO:0016887
Prci12g0440 435 Gene3D - 149 309 IPR027417 -
Prci12g0440 435 Coils Coil 112 132 - -
Prci12g0440 435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 409 IPR027417 -
Prci12g0440 435 Gene3D - 310 398 IPR042197 -
Prci12g0440 435 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 25 432 - -
Prci12g0440 435 PRINTS Disease resistance protein signature 253 267 - -
Prci12g0440 435 PRINTS Disease resistance protein signature 180 195 - -
Prci12g0440 435 PRINTS Disease resistance protein signature 344 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0440 Prci-Chr12 3811947 3818593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0440 181 433 WRKY Transcription Factor Family AT5G45050 28.897 1.01e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0440 - - pcin:129288189 851.662