Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0424 ATGATTCTGGACAACAGAATATTACTTGTCAAGGGAAGGGCAACTGCGGCAAACACCTCTCTCGTCTTTCACAGGCTCTGTCTGGAATCAACAATGGAGATTCTCGGTGCCATTGCCGGCGAAATAGCAAAGTATACACTGAAACCCATTGTACGACAAGTGGGATATTTGTTTTTTTACAAAGACAATTTTAAGGAGCTAAAGAATCAAGTCGAGAAGCTGGGGACGGCAAAAGAGCGAATTGTGCATGAGGTTGAAGCAGAGAGAAGAAATGGAAGAGAGATTGAACCTGATGTGGAGGAGTGGCTGAATAAAGCTAATGACACTTTAGAGAAAGCCAAGCGATTGTGTGAAGATCCTCGCTGTGTGAAGGCAGAGTGTTCTGGATGGTGTCTTCCTAATTTGATTTCACGCCATCAACTAAGTCGAAATGCAAAGAAAACGGTAGAAAATGTTGCTGAAGTGCTGACACATGGGAAGTTCGATCGAATTGGGCACCTCCCTCGTCTACCCACCATCACAACAAGAGATAATGTAAAGCTCGGGTCAAGGAACTTAATGAAGGAGCGCATTTTATCGGTTCTAAAAGACCTTAAAGTAAGTAGAATAGGGGTCTATGGATTAAGTGGGGTGGGGAAGACCACTCTAGCAAGTGAAATTGTTGCACAAGTTAAGGATGACAAGTTATTTGATGAAGTGGTTATGGTGACTGTATCACAACCTGTAGATATTGAGGGAATTCTTGATCAGATGGCAGATCAGTTAGGCCTGCGCTTTGAAGAGAAGTCCCCCATTGGAAAGGCAAGCCGCTTACGTGCGAGAATCAAACAGGACAACGCTATCCTCATCATATTGGACGACATCTATGAAGAACTTGATTTGGCTAAATTGGGAATTCCATCACTAGATAATCATAAGCTGGGAATTTCTACACAGGATAGTTATAAGGGCTGCAAATTGTTGCTCACTTCTAGAAACGAAAATATTTTACAAAAGAATGCAACTCAAGAGAATTTCAGACTCGAAGAATTAAATAATGAAGAATCTCTTGAATTATTTCAAATGACGAATGATGTGGGTGTCGAGTTGCGAGATATTGCAACGGAAGTGGTAAAAAGTTGTGCGGGCTTGCCTGTGTTGATAGTCGCAATGGCAAAGTTATTAAAAAATAAAGAAATTCATCAGTGGAAAAATGCCTTGGATGAACTGAAAAGAGTTAACAGTGGAATAGTGGGTGAGAAAATTTTTCCACCTTTGAAATACATGTACGATTGTTTACAAGATGATGGGGCGAAGCAAGTATTCTTGCTTTGTGGAGTGTATGGAACGTCCATTCTTGTTGGTGACTTGTTGAAATACGTCATTGGTTTGGATGTATTCAAATATATAAAAACCATTGATGGTGTAAGAAACAAGCTTCAAACAGTGATTGATGACTTGAAGGCATCCTGCTTTTTGCTTCACAGTGATGCAATTGCACGAGTGATCAAAATGCACGACCTTCTTAGAGAAGTAGCAATATCAATTGCATCTGGGGATCAACATGTCTTCACAATGAATGTTCCATTTCAAGATTGGCCAGGAGAGGATTTTTTTAAAAGGTGTACCTGGATAAACTTGTATCGTTGTTGCATCCAAACACTTCCTGAAAAGTTAGATTGCCCCAGTTTGAAATTTCTTCACTTAAATAGCAAAGATAATCCTTCATTGGAAATTCCAAACTCCTTTTTTGGGGGAATGAGAAACCTTGAGGTGTTGGATTTAACAGGAATGATGATATCATCGTTACCGACATCTCTTGCCACATTGACTGAACTTAAAACATTGTGCTTGGATCAGTGCTCTTTGAAAGTTATGGCTGGAATTGGAGCCTTGAAAAATTTAGAAATTCTCAGCTTCATCCGTTCATCTATGGAAGAGTTTCCAAGTGAAATAGGGCAGTTGACTCACCTAAGAATGTTGGATTTGAGTGGTTCTGGAATTGAGGTTATCCCACCCAATGTTGTGTCCAAGTTGACCACACTTGAGGAATTGTACATGGGCAATGCCTCGGTAAAATGGGAGGCAAAAAGTCCGACAAAGCAAAACAAAAATGCTAGTCTTGCTGAGCTCACGCATTTGACGGGCATGAGTACTCTAGAAATTCAAGCTGAGACTTGGATTTTACTGAGGGACATTGTATTTGAGAAGTTAGAGAGATATAAGATTGTTATTGGAGATAAATGGGATTGGCGAAATGATAATAATACCTTGAGGTTGTTAAAGCTAAAGCTTCACACTTGCTATCAATCAGAACATGGCATTAAAACGTTGATGGAAAGTGTGGAAGATTTATATTTAGAGGAAGTAAATGGCATTTCAAATGTGCTTCTCCAATTGAATGGCAAAGGATTTCCACAGCTAAAGCATTTGCACATCCAAAATAATGGAGAAATTCAGTGCATTATCAACTCAACAGGAAGGAATCAAACAAATATAATCTTGTTTCCAAAATTGGAGACATTAATACTTCATAATCTCTCCATGATGAAGGAGATATGTGATGGGCCACTGAGAGTTGATTCTTTTAGAAAGCTAAGAGTCATGAAGCTCAAAAGTTGCGAGCAGCTAAAATATGTCTTCTTGAATTCAATGGTTAAAAACTTTTCTCAACTTGTTGAAATTGAAGTCTCTGAATGCCATTCTATGGAGAACATAGTGTCTTTGGAAAGTATTAATAGTGGCATGATCATCAATAAAGCTGAGTTTATTCAATTGCGACACTTGGCTTTACAATATTTACCTGCAATGGTTAGTTTTTGCTGCTCTGATATTCCAACGTCATTCTTCGATGCAAAGGTTTCATTGTCAAATTTGGAGACCCTGAAATTAAGCTCGATTAATTTGGAGAAAATTTGGGATGATCATCAACATTCAACAGCCACTTCTTTCCGAAATCTAGTTAATTTAATCGTGAAGGACTGTGGCAGCCTGAAATATTTATTCTCACCTTTTATGGTTGAAAATCTAGAAAATCTCAAACGGCTTGAAATAAGTAAATGCCACGCGATGGAGGAGATAATGGCCATAGAAGCTGGGTTTCCCAAATTGGAGGAGATCATAATAAATGACATGAAGAACTTGAAGAGAGCATGGCACTACCAATTTGGCAGATCGAAGACAATGGAAGTGAACAAATGTGAGAAACTGGAGACTGTTTTTCCATCGGGCTCCATGCTTGAAGCACTAAGAAGTCTTGAGACGTTGAGGGTCAAAGATTGTGCTTCAGTTGAAGAGATATTCGAACTCACCACTGCTGATGGAATGCATGCTCAAGAAGTGACAGCACAGCTGAAAAATCTAGAAATAAGTGGACTGCCAGAGATGAAACGGATATGGAGCAAGGATCCCCAAGGACTTGTTCGCTTTTCCAATCTAGAACTCGTGGATATTGCGGGCTGTTACAAGCTGGAATATATCTTCCCCTTCTCCATTGCTAAGGATCTTCCACAACTTCAACATCTCAGACTAGTTTTGTGTAAGATCAAGGAAGTTGTTTCGAAGAAGGATGGATCATTGGATGAAACTACCATATTTGAGCTTACTCATCTCACCTCCCTGGTCCTAGGATATTTGCCTAAACTCAAGGGATTCTATGCAGGGGTTCATACATTAGAATGTCAATCCTTGGTAAGGTTGCAAGTGTTGGATTGTCCACATTTAAAGGTATTCAATCCGCGTGCAAATAGATGCCGGCAAAGTTTTGCTGATGACCGATTTCACTTCTCAATGCAACAATATCTATTTACAGTTAATGAAGAGGTGACTGGCAACTTGGATTCTTTGTACCTGCAATATTGGGATGCTAACGTCATATTGCATCACCAAGTTCCCTCGTACCGCAAACTCAAACATCTTTGGATATTTGCTTTTCAAGATGATCAAGCAAGTGCTCTGCTTCGGTTTCTCAAAAATGTACCTAGTCTCGAAAGGCTAAATGTTTCATTTAGCTCCACAAAGGAGATATTTTATGATGAATTGCTAACACATGAGGAAGAACGGAACAAAATTAACACCCGGCTTAAAGCATTGCGGCTACAGCGTTCACCGAAGCTTCAGAATTTATGTAGAGAAGGAAGTCAAATTCACCCTGTTCTTGAGGTTCTTGAAGTCTTAATGGTGGAAGAATGTTCCAGTTTAAGAAATTTAGTCCCTTCCTCTGCAACTTTCTACCACTTGACATATCTGGTGGTAATACAGTGCAACAGTTTGAAAAGCCTAATGACCTCATCAACGGCGGGAAGTCTTTTCAACTTGCAAAGGATGAAAATAGAAGAGTGTGATTCGCTGGAAGAAATTGTGACAGAAGAGGTGGATGGGGCAAAAAATGAAATTGCATTTAATAGTTTGTTAAGTTTAGAGCTAAATTATTTGCCAAGGCTCCGTGGTTTTTCATCAAGCAAGTGCCCCTTCAAGTTCCCATGGTTGGAGAGATTTGTTGTTAGCCAATGTCCTCAGATGCAAATTTTCTCAGACAAAGCAATAAGTGCACCAAAGCTTAGGACAACACTAGCGGAGGGAGAATCTTACTGGGAAGGAGACTTAAATGAAACGATTAGGAAGATGTTTCTGAACAAGGTGGCATTTTGTAGCTTCAAGCATTTAGAGCTTTCGAAATATCCGGAGTTAAGAGGATTGTGGTATGGCCAGGTTGGTCATGAAATATTTTCTAATTTGAAATCGTTGGTGGTGCGAAATTGCCAGTGGCTTTCGAGTATTCTTCTTTCTGGAAGCATGCTAGAAGCTTTGTTCAACTTGGAAGAGCTTGAAGTGACTGAGTGTGATACACTTGAAGCTGTGTTTGATTTGGGCGATATGAATGGAAGAGGAAGGATGGCGAGAGAAACTATTCAGCTGAAAAAAATGAGACTTGATAGTCTGCCAAAACTGAAGCGCATGTGGAAACATGATTCCTGTGAAATTGCTAGTCTGGGTAATTCAAGCGATGTTTGTGCCGGTGAATGCCAATCATCAAATGGAGAAGAAAGGGTCGATTTCAAAAGTTCGGATCATTTGAAGCTCATTGCATCGAATTTGTTGACATTGCTATATTCATTGGAGGAACTAGAAGTGAACGATTGTGATTCCTTAGAAACAGTGTTTGATGTGAAGGTCATGGACGACACAGAAATGCATGTAAAGGAAGAAAGTCAATTGAAAAAGCTTACTCTCTTGGGACTGCCAAATCTGAAACATATATGGAATAGAGACCTTCCAAAAATACTCAGTTTCAAAAATTTGCAGATATTGACAATTGCAGGATGCCTGAACCTGAAACACGTGTTTTCGGTAACATTATGCCAAGATCTGCAGCGACTTCAAGAGCTTTCCATGCTTCATTGTGGCATTGAGGAAATTGTTGCAATTGAAGGAGAAGGACTAGATGATCTTGAGTTTGATTTTCCAAAGCTGACTTCCTTCATGCTATGTTGGTTGTCACGATTGAAGAATTTTTATCCAAGAAGACATAAGTTAGCATGTCCTTCATTGGAGACATTAGATGTCTGTGGTTGTGAAGAATTGGAAATATTTGACTTTAGCCATTTGGATTCCCAGCATACATCTACGGTGGACGAAATTGACATGCCGATTCAACAACCACTCTTTTCTTTTAAAGTGGTGTCACCGACTTTAAAAGATTTTGCATTAAATGGAAAAGATTCTATGAAGATACTGGATAGTCATCATGAGGCAAGTCTCTTTCCTGGTGTAGAGGTGCTTCGCCTACAATGCTTTCAAGAAACTCCAATAATGTGGCTAAATAGGTTCCTTGAAAAATTCCCTAACATTACAACACTTGAAGTGCGTTGTAGCACTTTTAAAATACTTTTTCCTTCCGAGGAAGTTGGTTATGGTAGTTCTAAAACTCCCAACCGGTTAAAAAAGTTGTGGCTTTTTCAGTTGGAGCAGCTTGAGCAGATAGGGAATGATTACGACTCTCTGTCAGATGTCCTTGAAGTACTCAGTGTGACGTGTTGTCCGAGTTTAACAAGCTTGGGACCACCTTCAATATCTTTCACTAGTTTAACTCACTTAAAAGTGGAGGACTGCAAAGGGATGACCTTTTTAATGACAGCTTCCACCGCTAGAAGTCTTGTGCACCTCAAAAAGTGGCGGATAATAAACTGTGGGATGATGGAGGAAGCTGTGATGATCGATGAAGGAACACCAGAAGAGATCACATTTGAAAGCTTAGAATATTTTGAAATGACTTCTTTACCCTCTCTCAAAAGCTTCTGCTCTGGCAAACCCACACTCGTATTCCTATCATTTGAATTACTAAAAGTGAGAGGATGCCCGAAAATGCAGAATTTCTCATCAGGAGACATTATAGCCCCTCCGATTGAAATAGAAATAGAAAATGGAACAACGCATTGGACAGAAGACGTTAATGCTACTATCAAACAGCTGGTCACGGGACAGGAAGTTTCAGATTTTGATGACAGCGAATAG 6492 0.397 MILDNRILLVKGRATAANTSLVFHRLCLESTMEILGAIAGEIAKYTLKPIVRQVGYLFFYKDNFKELKNQVEKLGTAKERIVHEVEAERRNGREIEPDVEEWLNKANDTLEKAKRLCEDPRCVKAECSGWCLPNLISRHQLSRNAKKTVENVAEVLTHGKFDRIGHLPRLPTITTRDNVKLGSRNLMKERILSVLKDLKVSRIGVYGLSGVGKTTLASEIVAQVKDDKLFDEVVMVTVSQPVDIEGILDQMADQLGLRFEEKSPIGKASRLRARIKQDNAILIILDDIYEELDLAKLGIPSLDNHKLGISTQDSYKGCKLLLTSRNENILQKNATQENFRLEELNNEESLELFQMTNDVGVELRDIATEVVKSCAGLPVLIVAMAKLLKNKEIHQWKNALDELKRVNSGIVGEKIFPPLKYMYDCLQDDGAKQVFLLCGVYGTSILVGDLLKYVIGLDVFKYIKTIDGVRNKLQTVIDDLKASCFLLHSDAIARVIKMHDLLREVAISIASGDQHVFTMNVPFQDWPGEDFFKRCTWINLYRCCIQTLPEKLDCPSLKFLHLNSKDNPSLEIPNSFFGGMRNLEVLDLTGMMISSLPTSLATLTELKTLCLDQCSLKVMAGIGALKNLEILSFIRSSMEEFPSEIGQLTHLRMLDLSGSGIEVIPPNVVSKLTTLEELYMGNASVKWEAKSPTKQNKNASLAELTHLTGMSTLEIQAETWILLRDIVFEKLERYKIVIGDKWDWRNDNNTLRLLKLKLHTCYQSEHGIKTLMESVEDLYLEEVNGISNVLLQLNGKGFPQLKHLHIQNNGEIQCIINSTGRNQTNIILFPKLETLILHNLSMMKEICDGPLRVDSFRKLRVMKLKSCEQLKYVFLNSMVKNFSQLVEIEVSECHSMENIVSLESINSGMIINKAEFIQLRHLALQYLPAMVSFCCSDIPTSFFDAKVSLSNLETLKLSSINLEKIWDDHQHSTATSFRNLVNLIVKDCGSLKYLFSPFMVENLENLKRLEISKCHAMEEIMAIEAGFPKLEEIIINDMKNLKRAWHYQFGRSKTMEVNKCEKLETVFPSGSMLEALRSLETLRVKDCASVEEIFELTTADGMHAQEVTAQLKNLEISGLPEMKRIWSKDPQGLVRFSNLELVDIAGCYKLEYIFPFSIAKDLPQLQHLRLVLCKIKEVVSKKDGSLDETTIFELTHLTSLVLGYLPKLKGFYAGVHTLECQSLVRLQVLDCPHLKVFNPRANRCRQSFADDRFHFSMQQYLFTVNEEVTGNLDSLYLQYWDANVILHHQVPSYRKLKHLWIFAFQDDQASALLRFLKNVPSLERLNVSFSSTKEIFYDELLTHEEERNKINTRLKALRLQRSPKLQNLCREGSQIHPVLEVLEVLMVEECSSLRNLVPSSATFYHLTYLVVIQCNSLKSLMTSSTAGSLFNLQRMKIEECDSLEEIVTEEVDGAKNEIAFNSLLSLELNYLPRLRGFSSSKCPFKFPWLERFVVSQCPQMQIFSDKAISAPKLRTTLAEGESYWEGDLNETIRKMFLNKVAFCSFKHLELSKYPELRGLWYGQVGHEIFSNLKSLVVRNCQWLSSILLSGSMLEALFNLEELEVTECDTLEAVFDLGDMNGRGRMARETIQLKKMRLDSLPKLKRMWKHDSCEIASLGNSSDVCAGECQSSNGEERVDFKSSDHLKLIASNLLTLLYSLEELEVNDCDSLETVFDVKVMDDTEMHVKEESQLKKLTLLGLPNLKHIWNRDLPKILSFKNLQILTIAGCLNLKHVFSVTLCQDLQRLQELSMLHCGIEEIVAIEGEGLDDLEFDFPKLTSFMLCWLSRLKNFYPRRHKLACPSLETLDVCGCEELEIFDFSHLDSQHTSTVDEIDMPIQQPLFSFKVVSPTLKDFALNGKDSMKILDSHHEASLFPGVEVLRLQCFQETPIMWLNRFLEKFPNITTLEVRCSTFKILFPSEEVGYGSSKTPNRLKKLWLFQLEQLEQIGNDYDSLSDVLEVLSVTCCPSLTSLGPPSISFTSLTHLKVEDCKGMTFLMTASTARSLVHLKKWRIINCGMMEEAVMIDEGTPEEITFESLEYFEMTSLPSLKSFCSGKPTLVFLSFELLKVRGCPKMQNFSSGDIIAPPIEIEIENGTTHWTEDVNATIKQLVTGQEVSDFDDSE 2163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0424 2163 SUPERFAMILY L domain-like 497 902 - -
Prci12g0424 2163 Gene3D Ribonuclease Inhibitor 933 1046 IPR032675 -
Prci12g0424 2163 Coils Coil 1340 1360 - -
Prci12g0424 2163 Gene3D Ribonuclease Inhibitor 1520 1874 IPR032675 -
Prci12g0424 2163 Pfam NB-ARC domain 187 409 IPR002182 GO:0043531
Prci12g0424 2163 Coils Coil 327 347 - -
Prci12g0424 2163 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1078 1238 - -
Prci12g0424 2163 SUPERFAMILY L domain-like 1109 1281 - -
Prci12g0424 2163 Gene3D Ribonuclease Inhibitor 1900 2124 IPR032675 -
Prci12g0424 2163 Gene3D Ribonuclease Inhibitor 1066 1247 IPR032675 -
Prci12g0424 2163 Gene3D Ribonuclease Inhibitor 1250 1518 IPR032675 -
Prci12g0424 2163 SUPERFAMILY RNI-like 926 1491 - -
Prci12g0424 2163 Gene3D Ribonuclease Inhibitor 746 932 IPR032675 -
Prci12g0424 2163 Gene3D Ribonuclease Inhibitor 516 724 IPR032675 -
Prci12g0424 2163 SMART AAA_5 199 347 IPR003593 GO:0016887
Prci12g0424 2163 Gene3D - 343 427 IPR042197 -
Prci12g0424 2163 PRINTS Disease resistance protein signature 202 217 - -
Prci12g0424 2163 PRINTS Disease resistance protein signature 275 289 - -
Prci12g0424 2163 PRINTS Disease resistance protein signature 374 388 - -
Prci12g0424 2163 PRINTS Disease resistance protein signature 1001 1017 - -
Prci12g0424 2163 SUPERFAMILY RNI-like 1731 2058 - -
Prci12g0424 2163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 438 IPR027417 -
Prci12g0424 2163 Gene3D - 169 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0424 Prci-Chr12 3706540 3720841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0424 198 480 WRKY Transcription Factor Family AT5G45050 23.510 2.02e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0424 - - pcin:129288205 4251.82