Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0422 ATGATTCTGGACAACAGAATATTACTTGTCAAGGGAAGGGCAACTGCGGCAAACACCTCTCTCGTCTTTCACAGGCTCTGTCTGGAATCAACAATGGAGATTCTCGGTGCCATTGCCGGCGAAATAGCAAAGTATACACTGAAACCCATTGTACGACAAGTGGGATATTTGTTTTTTTACAAAGACAATTTTAAGGAGCTAAAGAATCAAGTCGAGAAGCTGGGGACGGCAAAAGAGCGAATTGTGCATGAGGTTGAAGCAGAGAGAAGAAATGGAAGAGAGATTGAACCTGATGTGGAGGAGTGGCTGAATAAAGCTAATGACACTTTAGAGAAAGCCAAGCGATTGTGTGAAGATCCTCGCTGTGTGAAGGCAGAGTGTTCTGGATGGTGTCTTCCTAATTTGATTTCACGCCATCAACTAAGTCGAAATGCAAAGAAAACGGTAGAAAATGTTGCTGAAGTGCTGACACATGGGAAGTTCGATCGAATTGGGCACCTCCCTCGTCTACCCACCATCACAACAAGAGATAATGTAAAGCTCGGGTCAAGGAACTTAATGAAGGAGCGCATTTTATCGGTTCTAAAAGACCTTAAAGTAAGTAGAATAGGGGTCTATGGATTAAGTGGGGTGGGGAAGACCACTCTAGCAAGTGAAATTGTTGCACAAGTTAAGGATGACAAGTTATTTGATGAAGTGGTTATGGTGACTGTATCACAACCTGTAGATATTGAGGGAATTCTTGATCAGATGGCAGATCAGTTAGGCCTGCGCTTTGAAGAGAAGTCCCCCATTGGAAAGGCAAGCCGCTTACGTGCGAGAATCAAACAGGACAACGCTATCCTCATCATATTGGACGACATCTATGAAGAACTTGATTTGGCTAAATTGGGAATTCCATCACTAGATAATCATAAGCTGGGAATTTCTACACAGGATAGTTATAAGGGCTGCAAATTGTTGCTCACTTCTAGAAACGAAAATATTTTACAAAAGAATGCAACTCAAGAGAATTTCAGACTCGAAGAATTAAATAATGAAGAATCTCTTGAATTATTTCAAATGACGAATGATGTGGGTGTCGAGTTGCGAGATATTGCAACGGAAGTGGTAAAAAGTTGTGCGGGCTTGCCTGTGTTGATAGTCGCAATGGCAAAGTTATTAAAAAATAAAGAAATTCATCAGTGGAAAAATGCCTTGGATGAACTGAAAAGAGTTAACAGTGGAATAGTGGGTGAGAAAATTTTTCCACCTTTGAAATACATGTACGATTGTTTACAAGATGATGGGGCGAAGCAAGTATTCTTGCTTTGTGGAGTGTATGGAACGTCCATTCTTGTTGGTGACTTGTTGAAATACGTCATTGGTTTGGATGTATTCAAATATATAAAAACCATTGATGGTGTAAGAAACAAGCTTCAAACAGTGATTGATGACTTGAAGGCATCCTGCTTTTTGCTTCACAGTGATGCAATTGCACGAGTGATCAAAATGCACGACCTTCTTAGAGAAGTAGCAATATCAATTGCATCTGGGGATCAACATGTCTTCACAATGAATGTTCCATTTCAAGATTGGCCAGGAGAGGATTTTTTTAAAAGGTGTACCTGGATAAACTTGTATCGTTGTTGCATCCAAACACTTCCTGAAAAGTTAGATTGCCCCAGTTTGAAATTTCTTCACTTAAATAGCAAAGATAATCCTTCATTGGAAATTCCAAACTCCTTTTTTGGGGGAATGAGAAACCTTGAGGTGTTGGATTTAACAGGAATGATGATATCATCGTTACCGACATCTCTTGCCACATTGACTGAACTTAAAACATTGTGCTTGGATCAGTGCTCTTTGAAAGTTATGGCTGGAATTGGAGCCTTGAAAAATTTAGAAATTCTCAGCTTCATCCGTTCATCTATGGAAGAGTTTCCAAGTGAAATAGGGCAGTTGACTCACCTAAGAATGTTGGATTTGAGTGGTTCTGGAATTGAGGTTATCCCACCCAATGTTGTGTCCAAGTTGACCACACTTGAGGAATTGTACATGGGCAATGCCTCGGTAAAATGGGAGGCAAAAAGTCCGACAAAGCAAAACAAAAATGCTAGTCTTGCTGAGCTCACGCATTTGACGGGCATGAGTACTCTAGAAATTCAAGCTGAGACTTGGATTTTACTGAGGGACATTGTATTTGAGAAGTTAGAGAGATATAAGATTGTTATTGGAGATAAATGGGATTGGCGAAATGATAATAATACCTTGAGGTTGTTAAAGCTAAAGCTTCACACTTGCTATCAATCAGAACATGGCATTAAAACGTTGATGGAAAGTGTGGAAGATTTATATTTAGAGGAAGTAAATGGCATTTCAAATGTGCTTCTCCAATTGAATGGCAAAGGATTTCCACAGCTAAAGCATTTGCACATCCAAAATAATGGAGAAATTCAGTGCATTATCAACTCAACAGGAAGGAATCAAACAAATATAATCTTGTTTCCAAAATTGGAGACATTAATACTTCATAATCTCTCCATGATGAAGGAGATATGTGATGGGCCACTGAGAGTTGATTCTTTTAGAAAGCTAAGAGTCATGAAGCTCAAAAGTTGCGAGCAGCTAAAATATGTCTTCTTGAATTCAATGGTTAAAAACTTTTCTCAACTTGTTGAAATTGAAGTCTCTGAATGCCATTCTATGGAGAACATAGTGTCTTTGGAAAGTATTAATAGTGGCATGATCATCAATAAAGCTGAGTTTATTCAATTGCGACACTTGGCTTTACAATATTTACCTGCAATGGTTAGTTTTTGCTGCTCTGATATTCCAACGTCATTCTTCGATGCAAAGGTTTCATTGTCAAATTTGGAGACCCTGAAATTAAGCTCGATTAATTTGGAGAAAATTTGGGATGATCATCAACATTCAACAGCCACTTCTTTCCGAAATCTAGTTAATTTAATCGTGAAGGACTGTGGCAGCCTGAAATATTTATTCTCACCTTTTATGGTTGAAAATCTAGAAAATCTCAAACGGCTTGAAATAAGTAAATGCCACGCGATGGAGGAGATAATGGCCATAGAAGTAAGTAACAATGAGATTACACTGGCTCAAGATCAGGTAGCTGGGTTTCCCAAATTGGAGGAGATCATAATAAATGACATGAAGAACTTGAAGAGAGCATGGCACTACCAATTTGGCAGATCGAAGACAATGGAAGTGAACAAATGTGAGAAACTGGAGACTGTTTTTCCATCGGGCTCCATGCTTGAAGCACTAAGAAGTCTTGAGACGTTGAGGGTCAAAGATTGTGCTTCAGTTGAAGAGATATTCGAACTCACCACTGCTGATGGAATGCATGCTCAAGAAGTGACAGCACAGCTGAAAAATCTAGAAATAAGTGGACTGCCAGAGATGAAACGGATATGGAGCAAGGATCCCCAAGGACTTGTTCGCTTTTCCAATCTAGAACTCGTGGATATTGCGGGCTGTTACAAGCTGGAATATATCTTCCCCTTCTCCATTGCTAAGGATCTTCCACAACTTCAACATCTCAGACTAGTTTTGTGTAAGATCAAGGAAGTTGTTTCGAAGAAGGATGGATCATTGGATGAAACTACCATATTTGAGCTTACTCATCTCACCTCCCTGGTCCTAGGATATTTGCCTAAACTCAAGGGATTCTATGCAGGGGTTCATACATTAGAATGTCAATCCTTGGTAAGGTTGCAAGTGTTGGATTGTCCACATTTAAAGGTATTCAATCCGCGTGCAAATAGATGCCGGCAAAGTTTTGCTGATGACCGATTTCACTTCTCAATGCAACAATATCTATTTACAGTTAATGAAGAGGTGACTGGCAACTTGGATTCTTTGTACCTGCAATATTGGGATGCTAACGTCATATTGCATCACCAAGTTCCCTCGTACCGCAAACTCAAACATCTTTGGATATTTGCTTTTCAAGATGATCAAGCAAGTGCTCTGCTTCGGTTTCTCAAAAATGTACCTAGTCTCGAAAGGCTAAATGTTTCATTTAGCTCCACAAAGGAGATATTTTATGATGAATTGCTAACACATGAGGAAGAACGGAACAAAATTAACACCCGGCTTAAAGCATTGCGGCTACAGCGTTCACCGAAGCTTCAGAATTTATGTAGAGAAGGAAGTCAAATTCACCCTGTTCTTGAGGTTCTTGAAGTCTTAATGGTGGAAGAATGTTCCAGTTTAAGAAATTTAGTCCCTTCCTCTGCAACTTTCTACCACTTGACATATCTGGTGGTAATACAGTGCAACAGTTTGAAAAGCCTAATGACCTCATCAACGGCGGGAAGTCTTTTCAACTTGCAAAGGATGAAAATAGAAGAGTGTGATTCGCTGGAAGAAATTGTGACAGAAGAGGTGGATGGGGCAAAAAATGAAATTGCATTTAATAGTTTGTTAAGTTTAGAGCTAAATTATTTGCCAAGGCTCCGTGGTTTTTCATCAAGCAAGTGCCCCTTCAAGTTCCCATGGTTGGAGAGATTTGTTGTTAGCCAATGTCCTCAGATGCAAATTTTCTCAGACAAAGCAATAAGTGCACCAAAGCTTAGGACAACACTAGCGGAGGGAGAATCTTACTGGGAAGGAGACTTAAATGAAACGATTAGGAAGATGTTTCTGAACAAGGTGGCATTTTGTAGCTTCAAGCATTTAGAGCTTTCGAAATATCCGGAGTTAAGAGGATTGTGGTATGGCCAGGTTGGTCATGAAATATTTTCTAATTTGAAATCGTTGGTGGTGCGAAATTGCCAGTGGCTTTCGAGTATTCTTCTTTCTGGAAGCATGCTAGAAGCTTTGTTCAACTTGGAAGAGCTTGAAGTGACTGAGTGTGATACACTTGAAGCTGTGTTTGATTTGGGCGATATGAATGGAAGAGGAAGGATGGCGAGAGAAACTATTCAGCTGAAAAAAATGAGACTTGATAGTCTGCCAAAACTGAAGCGCATGTGGAAACATGATTCCTGTGAAATTGCTAGTCTGGGTAATTCAAGCGATGTTTGTGCCGGTGAATGCCAATCATCAAATGGAGAAGAAAGGGTCGATTTCAAAAGTTCGGATCATTTGAAGCTCATTGCATCGAATTTGTTGACATTGCTATATTCATTGGAGGAACTAGAAGTGAACGATTGTGATTCCTTAGAAACAGTGTTTGATGTGAAGGTCATGGACGACACAGAAATGCATGTAAAGGAAGAAAGTCAATTGAAAAAGCTTACTCTCTTGGGACTGCCAAATCTGAAACATATATGGAATAGAGACCTTCCAAAAATACTCAGTTTCAAAAATTTGCAGATATTGACAATTGCAGGATGCCTGAACCTGAAACACGTGTTTTCGGTAACATTATGCCAAGATCTGCAGCGACTTCAAGAGCTTTCCATGCTTCATTGTGGCATTGAGGAAATTGTTGCAATTGAAGGAGAAGGACTAGATGATCTTGAGTTTGATTTTCCAAAGCTGACTTCCTTCATGCTATGTTGGTTGTCACGATTGAAGAATTTTTATCCAAGAAGACATAAGTTAGCATGTCCTTCATTGGAGACATTAGATGTCTGTGGTTGTGAAGAATTGGAAATATTTGACTTTAGCCATTTGGATTCCCAGCATACATCTACGGTGGACGAAATTGACATGCCGATTCAACAACCACTCTTTTCTTTTAAAGTGGTGTCACCGACTTTAAAAGATTTTGCATTAAATGGAAAAGATTCTATGAAGATACTGGATAGTCATCATGAGTTGGAGCAGCTTGAGCAGATAGGGAATGATTACGACTCTCTGTCAGATGTCCTTGAAGTACTCAGTGTGACGTGTTGTCCGAGTTTAACAAGCTTGGGACCACCTTCAATATCTTTCACTAGTTTAACTCACTTAAAAGTGGAGGACTGCAAAGGGATGACCTTTTTAATGACAGCTTCCACCGCTAGAAGTCTTGTGCACCTCAAAAAGTGGCGGATAATAAACTGTGGGATGATGGAGGAAGCTGTGATGATCGATGAAGGAACACCAGAAGAGATCACATTTGAAAGCTTAGAATATTTTGAAATGACTTCTTTACCCTCTCTCAAAAGCTTCTGCTCTGGCAAACCCACACTCGTATTCCTATCATTTGAATTACTAAAAGTGAGAGGATGCCCGAAAATGCAGAATTTCTCATCAGGAGACATTATAGCCCCTCCGATTGAAATAGAAATAGAAAATGGAACAACGCATTGGACAGAAGACGTTAATGCTACTATCAAACAGCTGGTCACGGGACAGGAAGTTTCAGATTTTGATGACAGCGAATAG 6321 0.3971 MILDNRILLVKGRATAANTSLVFHRLCLESTMEILGAIAGEIAKYTLKPIVRQVGYLFFYKDNFKELKNQVEKLGTAKERIVHEVEAERRNGREIEPDVEEWLNKANDTLEKAKRLCEDPRCVKAECSGWCLPNLISRHQLSRNAKKTVENVAEVLTHGKFDRIGHLPRLPTITTRDNVKLGSRNLMKERILSVLKDLKVSRIGVYGLSGVGKTTLASEIVAQVKDDKLFDEVVMVTVSQPVDIEGILDQMADQLGLRFEEKSPIGKASRLRARIKQDNAILIILDDIYEELDLAKLGIPSLDNHKLGISTQDSYKGCKLLLTSRNENILQKNATQENFRLEELNNEESLELFQMTNDVGVELRDIATEVVKSCAGLPVLIVAMAKLLKNKEIHQWKNALDELKRVNSGIVGEKIFPPLKYMYDCLQDDGAKQVFLLCGVYGTSILVGDLLKYVIGLDVFKYIKTIDGVRNKLQTVIDDLKASCFLLHSDAIARVIKMHDLLREVAISIASGDQHVFTMNVPFQDWPGEDFFKRCTWINLYRCCIQTLPEKLDCPSLKFLHLNSKDNPSLEIPNSFFGGMRNLEVLDLTGMMISSLPTSLATLTELKTLCLDQCSLKVMAGIGALKNLEILSFIRSSMEEFPSEIGQLTHLRMLDLSGSGIEVIPPNVVSKLTTLEELYMGNASVKWEAKSPTKQNKNASLAELTHLTGMSTLEIQAETWILLRDIVFEKLERYKIVIGDKWDWRNDNNTLRLLKLKLHTCYQSEHGIKTLMESVEDLYLEEVNGISNVLLQLNGKGFPQLKHLHIQNNGEIQCIINSTGRNQTNIILFPKLETLILHNLSMMKEICDGPLRVDSFRKLRVMKLKSCEQLKYVFLNSMVKNFSQLVEIEVSECHSMENIVSLESINSGMIINKAEFIQLRHLALQYLPAMVSFCCSDIPTSFFDAKVSLSNLETLKLSSINLEKIWDDHQHSTATSFRNLVNLIVKDCGSLKYLFSPFMVENLENLKRLEISKCHAMEEIMAIEVSNNEITLAQDQVAGFPKLEEIIINDMKNLKRAWHYQFGRSKTMEVNKCEKLETVFPSGSMLEALRSLETLRVKDCASVEEIFELTTADGMHAQEVTAQLKNLEISGLPEMKRIWSKDPQGLVRFSNLELVDIAGCYKLEYIFPFSIAKDLPQLQHLRLVLCKIKEVVSKKDGSLDETTIFELTHLTSLVLGYLPKLKGFYAGVHTLECQSLVRLQVLDCPHLKVFNPRANRCRQSFADDRFHFSMQQYLFTVNEEVTGNLDSLYLQYWDANVILHHQVPSYRKLKHLWIFAFQDDQASALLRFLKNVPSLERLNVSFSSTKEIFYDELLTHEEERNKINTRLKALRLQRSPKLQNLCREGSQIHPVLEVLEVLMVEECSSLRNLVPSSATFYHLTYLVVIQCNSLKSLMTSSTAGSLFNLQRMKIEECDSLEEIVTEEVDGAKNEIAFNSLLSLELNYLPRLRGFSSSKCPFKFPWLERFVVSQCPQMQIFSDKAISAPKLRTTLAEGESYWEGDLNETIRKMFLNKVAFCSFKHLELSKYPELRGLWYGQVGHEIFSNLKSLVVRNCQWLSSILLSGSMLEALFNLEELEVTECDTLEAVFDLGDMNGRGRMARETIQLKKMRLDSLPKLKRMWKHDSCEIASLGNSSDVCAGECQSSNGEERVDFKSSDHLKLIASNLLTLLYSLEELEVNDCDSLETVFDVKVMDDTEMHVKEESQLKKLTLLGLPNLKHIWNRDLPKILSFKNLQILTIAGCLNLKHVFSVTLCQDLQRLQELSMLHCGIEEIVAIEGEGLDDLEFDFPKLTSFMLCWLSRLKNFYPRRHKLACPSLETLDVCGCEELEIFDFSHLDSQHTSTVDEIDMPIQQPLFSFKVVSPTLKDFALNGKDSMKILDSHHELEQLEQIGNDYDSLSDVLEVLSVTCCPSLTSLGPPSISFTSLTHLKVEDCKGMTFLMTASTARSLVHLKKWRIINCGMMEEAVMIDEGTPEEITFESLEYFEMTSLPSLKSFCSGKPTLVFLSFELLKVRGCPKMQNFSSGDIIAPPIEIEIENGTTHWTEDVNATIKQLVTGQEVSDFDDSE 2106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0422 2106 SUPERFAMILY RNI-like 1084 1342 - -
Prci12g0422 2106 SUPERFAMILY L domain-like 494 1104 - -
Prci12g0422 2106 SUPERFAMILY RNI-like 771 1019 - -
Prci12g0422 2106 PRINTS Disease resistance protein signature 202 217 - -
Prci12g0422 2106 PRINTS Disease resistance protein signature 374 388 - -
Prci12g0422 2106 PRINTS Disease resistance protein signature 1001 1017 - -
Prci12g0422 2106 PRINTS Disease resistance protein signature 275 289 - -
Prci12g0422 2106 Gene3D Ribonuclease Inhibitor 1534 1884 IPR032675 -
Prci12g0422 2106 Coils Coil 1353 1373 - -
Prci12g0422 2106 Gene3D Ribonuclease Inhibitor 1267 1532 IPR032675 -
Prci12g0422 2106 Gene3D Ribonuclease Inhibitor 1901 2066 IPR032675 -
Prci12g0422 2106 Coils Coil 327 347 - -
Prci12g0422 2106 Pfam NB-ARC domain 187 409 IPR002182 GO:0043531
Prci12g0422 2106 Gene3D Ribonuclease Inhibitor 917 1252 IPR032675 -
Prci12g0422 2106 SUPERFAMILY L domain-like 1284 1621 - -
Prci12g0422 2106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 438 IPR027417 -
Prci12g0422 2106 Gene3D - 343 427 IPR042197 -
Prci12g0422 2106 SMART AAA_5 199 347 IPR003593 GO:0016887
Prci12g0422 2106 SUPERFAMILY L domain-like 1559 1999 - -
Prci12g0422 2106 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1091 1251 - -
Prci12g0422 2106 Gene3D Ribonuclease Inhibitor 520 621 IPR032675 -
Prci12g0422 2106 Gene3D Ribonuclease Inhibitor 622 913 IPR032675 -
Prci12g0422 2106 Gene3D - 169 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0422 Prci-Chr12 3706540 3720841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0422 198 480 WRKY Transcription Factor Family AT5G45050 23.510 2.19e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0422 - - pcin:129288205 3793.82