LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci12g0410	ATGGAGATTCTCAGTGCCATTGCTGGCGAAATAGCAAAGTATACACTGAAACCCATTGTACGACAAGTGGGATATTTGTTTTTTTACAAAGACAATTTTAAGGAGCTAAAGGATCAAGTCGAGGCGCTGGGGATAGCAAAAGAGCGAATTGTGCATGAGGTTGAAGCGGAGAGAAGAAATGGAAGAGAGATTGAAGCTGATGTGGGGGAGTGGCTGAAGAAAGCTGACACGACTTTAAAGGAAGCTGATGGAGTGTGTAAAGATCCACGCTGTGTGAAAGCAGACTGTTCTGGATGGTGTTTTCCTAATTTGATTTCACGCCATCAACTAAGTCGAAATGCAAAGAAAACGGTAGAAAATGTTGCTAAAGTGCTGACAAATGGGAAGTTCGATCGAATTGCGCACCTCCCTCCTTTACCCACCATCATAACAATTAGTGTAAAGCTTGAGTCAAGGAACAAGATGAAGGAGGAGATTTTGCTGGCTCTTAAAGACCCTAAACTAAGCAGAATAGGAGTCTATGGATTAAGTGGGGTGGGGAAGACCACTCTAGCTGGAGAAATTGTTGAGCAAGTGAAGCATGAAAGGTTATTTGATGAAGTGGTTATGGTAACTATATCACAAACTGCAGATATTGACAGAATTCAAGATGAGATGGCAGATAAGCTAGGCCTCCGCTTTGGAGAGAGGTCTATGGCTGGAAAAGCAGGCCGCTTGTATGACAGAATCACACGGGAGAAAGCTATCCTCATCATATTGGATGACATCTATAATCAACTTAATTTGGATAACTTGGGAATTCCATCCAAAGATAAATATAAGTTGGGAATTTCTATTGAGGATAACTATAAGGGCTGCAAGTTGCTGCTAACTTCTAGAGACAAAAAAATTTTAGAAAACTATGATACTGAAAAGAATTTTAGACTTGAAGTTTTAAATGATGAAGAATCTCGTAGATTATTTCAAAATATGAATGATGATGCCGTCGGAGATGTTGAGTTGCAAGATATTGCAGCCCAAGTGACCCGAAGTTGTGCAGGCTTGCCTGTTGTGATAGTCACAATGGCAAAGGCGTTGAGAAATAAGGGAATTGATTTTTGGGAAAATGCCTTGAAGAAATTGGAAAGCGTCGATAATGGGGAGAGAGTTTTCGAAGCTTTGCAATTTAGTTACAATCAATTGAAAGATGAGGAAGTGAAGCAGGTTTTCTTGCTTTGTGGAGTACAAGGAACTTCCACTTATGTTAGTGACTTGTTGAAATATGTATTTGGTTTGGGTATATTCAAGCAAGTAGATACCGTTGAAGATGCAAGAATCAAACTTCGCGAAACGATGGCTGATTTGAAGTCATGTTGTTTGTTACTTGACCATGATGCAACGATCAAAATGCATGATACTGTTTGCAAAGTAGCTATAAAAATTGCATTTAGGGATTTTTATGTTTTCACACTGGAAAGGACAATTGGCTTGCAAGGTTTGCCAGATGGGGATTTTCTCAAAAGGTGTTCCCAAATAAATTTAATTCGTTGTTGTATCCGACAACTTCCTGAAAAGTTAGATTGTCCTGATTTGAAATTCCTTCACTTGAATAGTAAAGATAATCCTTCATTGGAAATTCCAAATTCCTTTTTTGAGGGTATGAGAAAACTTGAAGTGTTGGATGTCACAGGAATGATCGTACCATCATTACCTACGTCGCTTGTTTCCTTGACCAAACTTAAAACATTATGTTTGGATCATTGTTATTTGAAAGATATGGCTGGAATTGGAGTTTTGAAAAATTTAAAAATTCTTAGCTTCATCCATTCATCTATGGAAGAGTTTCCCAGTGAAATAGGACAATTGACTCATCTAAAAATGTTGGATTTGAGGAATTCTGGAATTGAAGTCATCCCACCCAACATTGTGTCCCAGTTGACCAAACTGGAGGAATTGTATATAGGCAATGCCTTGATAAAGTGGGGCGTAGACAATTCTGCTAAGCAAAACAAAAATGCTAGTCTTAGTGAGCTAAGGCATTTGACAAGCTTAAGTACTCTAGAAATTCAAACGGAGACTTGGATTTTGACGAGGGGCATAAGGTTTGAGAACTTAAAGAGATATAAGATTGTTGTAGGAGATAAATGGGAATGGCCATATTATAATGAGACCTCAAGATTGTTAAAGCTGAAGCTTGATACTCACATTCCTTCTGAACATGGGATTAAAATGTTGATTAAAAGAGCGGAAGATTTGTACTTAGATGAAGTAAATGGCATTTCAAATGTGGTTTTCCAATTGAATGGCGAAGGATTTCCATTGCTAAAGCATCTCCACATCCAATATAATGGTGAAATTCAGTACATTATCAACTCAATCGGGAGGAATCAAACTAACGTAATTCTGTTTCCCAAATTGGAGACTCTCATACTTCAGAATCTCTCTATGTTGGAGGAGATATGTCATGGCCCTTTGTGGGTTGGTTCTTTTCGAGAACTTAGAGTCATCAAGCTCAAAAGTTGTGGCAAACTAGAATATGTCTTGTTGAATTCAATGATTAAAGAATTTTCTCAGCTTGTTGAAATGGATGTTTCTGAATGCCCTTCTGTGAAGAATATTGTGTTTATGGAAAGCATGAATAGTGGCATGGTCATCAATAAAGTTGAGTTTCTTCCACTGCGACGCTTGGCTTTACAATATTTACATGCAATGGTCGGTTTTCGCTCTGATAACCCAGCATTGTTTTTTGACGCAAAGGTTTCATTGCCAAACTTGGACAGCTTGAAATTGAGCTCGATCAATTTAAACAAAATTTGGGATGATCATCAACTTTCAGTACCCAATTCTTTTCAGAATCTAGCTCATTTGATCGTGGAGGAGTGTGGCAACCTACAGTATTTGTTCTTACCTTCCATGGTTGAAAATCTGAAAAATCTCAAACAGCTTAAAGTAAGTAAATGCGACAAGATGGAGGAGATAATAGCCACTGAAGGAAGAAACAATGAGATTACATTGAATCAAGAGGCTGGATTTTCCAAATTGGAGGAGATCATAATAAATGACATGAAAAACTTGAAGACAGCATGGCACTATCAATTTGGCAGATTGAAGACATTGGAAATCAAGAAGTGTGAGAGACTGGAGACTATTTTTCCAGCAGGCTACATGCGTGAAGCATTAAGAAGTCTTGAGACATTGAAGGTCTGTGATTGTGCTTTAGTGAAAGAGATATTCCACTTAACGGCCAATGGAATGGGTACTGAAGAGGCGACAACCCAGCTTAAAAGTCTAGTACTACATGGACTGCCAAAGATGAAACAAATATGGAGTAGGGATCCCCAGGGACTTTTTCGCTTTTTTAATCTACAGCTTGTGCAAATTGAAGACTGTGAAAATTTAGAGTATGTCTTCCCATTCTCCATTGCTAAGGATCTTCCACAACTTGATGACCTCCAGTTAGTTTCATGCGGGATAAAGGAAGTTGTTTCAAAAAAGGATGGACCTATGGATGAAACTACCATATTTGAGCTTAATCATCTCACCTGTGTGAAACTAGTACGTTTACATAAGCTCAAGGAATTCTATGTCGGGGCTCATACCTTAGAATGTCAATCCTTGAGAAAATTGTTTGTGCTTAATTGTAAGCTACTGAAGCTTTTCAATTCACGGTCAAGCAGATGTCAAGAAAGTCCTTCATATCACCAACCTCATTTCTCAAAGCCACAGCCTCTGTTCCAAGTTGAAGAGGTGATTGGCAACTTACACATTTTGGCACTACGTTGTGTGGATGCTAACATGATATTGCAACACCAAGTTCCAGGGGAACTCTTCTGTGAAATCAAAGATCTTGTGATAACTGAATTTGAAGATGATAAAGCAACTTTTCCGCATTGGTTTCTAAAAAATTTACCCAAGCTTGAGGTACTAACTGTTATGACCAGTTCCTTTAAGGAAATATTTTGTGATGAAACATTAATTGATGAGGAGGGACAAGACAAAATTAGCACACGAGTTAAAAGATTGTCGCTCTCAACTTTACCTGAACTTCAGGATTTATGTAGAGGAGGAAGTCAAATTCACCCAGTTCTTGAGCTTCTTGAAATCTTAACTGTGATAGAATGTTCCAATCTGAGAAATTTAGTTCCTTCCTCTGCAACTTTTTGCCACTTGACATGCATGGTGATAACGAACTGCCATAGTTTGAAAAGCCTGATGACGGCATCAACCGCACGAAGTCTTGTCAAGCTGCAAACGATGAAATTAGAAGAGTGCAAGTCACTTCAAAAAGTTGTGACAGAAGAGGTGAATGAGACAGAACATGAAATTGCATTTAACAGTCTGTTAATTTTAGAGCTGAATTATTTGCCAGTGCTCCATAGTTTTTCATCAAGTAAGTACTCCTTCAAGTTTCCATGGTTGGAGAGAGTTGTTGTTAGTCAATGCCCTAGGATGCAGATTTTCTCTGCCAAAGCAACAAGTACACCCAAGCTTAAAAAAGTGCTAATAGAGGAAAAAGCCTGCGGAGAATATTATTGGCAAGGCGACTTAAATGGAACAATAAACAATATGTATCTGAACAAGGTTGCATTTTGTAGCTTCGTGCATTTAAAGGTTTCGGATTATCCTGAGTTGGGAGAATTGTGGTATGGCCAAGTTAAGAACAAATTATTTTGTAATTTGAAATCTTTGGTGGTGCAAAATTGCCATTGGTTGTCAAATTTTCTTCTTTCTGGAAATATACTTGAAGCTCTTTCCAACTTGAAAGAGCTTGAAGTAAGAGAGTGCGTCACACTTGAAGCTGTGTTTGAGTTGGGCGACATAAATGAAAGGGGATTAATAGTGAGAGAAATAAAAAAAAATAACTCTGTCTAA	4851	0.382	MEILSAIAGEIAKYTLKPIVRQVGYLFFYKDNFKELKDQVEALGIAKERIVHEVEAERRNGREIEADVGEWLKKADTTLKEADGVCKDPRCVKADCSGWCFPNLISRHQLSRNAKKTVENVAKVLTNGKFDRIAHLPPLPTIITISVKLESRNKMKEEILLALKDPKLSRIGVYGLSGVGKTTLAGEIVEQVKHERLFDEVVMVTISQTADIDRIQDEMADKLGLRFGERSMAGKAGRLYDRITREKAILIILDDIYNQLNLDNLGIPSKDKYKLGISIEDNYKGCKLLLTSRDKKILENYDTEKNFRLEVLNDEESRRLFQNMNDDAVGDVELQDIAAQVTRSCAGLPVVIVTMAKALRNKGIDFWENALKKLESVDNGERVFEALQFSYNQLKDEEVKQVFLLCGVQGTSTYVSDLLKYVFGLGIFKQVDTVEDARIKLRETMADLKSCCLLLDHDATIKMHDTVCKVAIKIAFRDFYVFTLERTIGLQGLPDGDFLKRCSQINLIRCCIRQLPEKLDCPDLKFLHLNSKDNPSLEIPNSFFEGMRKLEVLDVTGMIVPSLPTSLVSLTKLKTLCLDHCYLKDMAGIGVLKNLKILSFIHSSMEEFPSEIGQLTHLKMLDLRNSGIEVIPPNIVSQLTKLEELYIGNALIKWGVDNSAKQNKNASLSELRHLTSLSTLEIQTETWILTRGIRFENLKRYKIVVGDKWEWPYYNETSRLLKLKLDTHIPSEHGIKMLIKRAEDLYLDEVNGISNVVFQLNGEGFPLLKHLHIQYNGEIQYIINSIGRNQTNVILFPKLETLILQNLSMLEEICHGPLWVGSFRELRVIKLKSCGKLEYVLLNSMIKEFSQLVEMDVSECPSVKNIVFMESMNSGMVINKVEFLPLRRLALQYLHAMVGFRSDNPALFFDAKVSLPNLDSLKLSSINLNKIWDDHQLSVPNSFQNLAHLIVEECGNLQYLFLPSMVENLKNLKQLKVSKCDKMEEIIATEGRNNEITLNQEAGFSKLEEIIINDMKNLKTAWHYQFGRLKTLEIKKCERLETIFPAGYMREALRSLETLKVCDCALVKEIFHLTANGMGTEEATTQLKSLVLHGLPKMKQIWSRDPQGLFRFFNLQLVQIEDCENLEYVFPFSIAKDLPQLDDLQLVSCGIKEVVSKKDGPMDETTIFELNHLTCVKLVRLHKLKEFYVGAHTLECQSLRKLFVLNCKLLKLFNSRSSRCQESPSYHQPHFSKPQPLFQVEEVIGNLHILALRCVDANMILQHQVPGELFCEIKDLVITEFEDDKATFPHWFLKNLPKLEVLTVMTSSFKEIFCDETLIDEEGQDKISTRVKRLSLSTLPELQDLCRGGSQIHPVLELLEILTVIECSNLRNLVPSSATFCHLTCMVITNCHSLKSLMTASTARSLVKLQTMKLEECKSLQKVVTEEVNETEHEIAFNSLLILELNYLPVLHSFSSSKYSFKFPWLERVVVSQCPRMQIFSAKATSTPKLKKVLIEEKACGEYYWQGDLNGTINNMYLNKVAFCSFVHLKVSDYPELGELWYGQVKNKLFCNLKSLVVQNCHWLSNFLLSGNILEALSNLKELEVRECVTLEAVFELGDINERGLIVREIKKNNSV	1616

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci12g0410	1616	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	1055	1214	-	-
	Prci12g0410	1616	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	133	406	IPR027417	-
	Prci12g0410	1616	Pfam	NB-ARC domain	154	392	IPR002182	GO:0043531
	Prci12g0410	1616	SUPERFAMILY	RNI-like	1357	1594	-	-
	Prci12g0410	1616	Coils	Coil	1616	1616	-	-
	Prci12g0410	1616	SMART	AAA_5	167	315	IPR003593	GO:0016887
	Prci12g0410	1616	Gene3D	Ribonuclease Inhibitor	483	704	IPR032675	-
	Prci12g0410	1616	Gene3D	-	311	395	IPR042197	-
	Prci12g0410	1616	PRINTS	Disease resistance protein signature	345	359	-	-
	Prci12g0410	1616	PRINTS	Disease resistance protein signature	243	257	-	-
	Prci12g0410	1616	PRINTS	Disease resistance protein signature	967	983	-	-
	Prci12g0410	1616	PRINTS	Disease resistance protein signature	170	185	-	-
	Prci12g0410	1616	SUPERFAMILY	L domain-like	489	868	-	-
	Prci12g0410	1616	Gene3D	-	136	309	IPR027417	-
	Prci12g0410	1616	Gene3D	Ribonuclease Inhibitor	715	878	IPR032675	-
	Prci12g0410	1616	Gene3D	Ribonuclease Inhibitor	1286	1502	IPR032675	-
	Prci12g0410	1616	Gene3D	Ribonuclease Inhibitor	879	1048	IPR032675	-
	Prci12g0410	1616	Gene3D	Ribonuclease Inhibitor	1051	1228	IPR032675	-
	Prci12g0410	1616	SUPERFAMILY	RNI-like	765	1204	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci12g0410	Prci-Chr12	3649895	3661853	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci12g0410	171	448	WRKY Transcription Factor Family	AT5G45050	24.832	7.63e-09	58.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci12g0410	-		-	pcin:129288116	3177.5