Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0401 ATGGTCTTGATCCAACAGGAAGAGGTTGGGACTGAAGAGAGAGTTGTGAATCTGTCTGAATCTGCGGAAACTGCAAAATCGTCAGCCTCCTCCAATGTCGATGACAGTAAAGAAGCTTCCGATGGCTTTGAAACCGCCAGCGACACTGAACTCGGCGGCGAGGTGGAGGAACGGGAACAACAACATCAACATCAGGAGCTGGGGATTCCTCCGGGAACTGATTCTTCCGAAGAGGCATCACACGATGAGGAATTGAAACAGCAGAAAGCATTGGCTCAAGCGAATGATGCAAAATTAGAAGGAAATGAGCTATTCGGGGATGGTCAATTTGAGGAGGCACTATCAAAGTATGAATTTGCTTTACAAATGGCTCCAGATATGCCTTCATCTGTAGAAATTCGCTCAATATGCCATTCAAATCGTGCTGTATGCTTTATGAAATTGGGGAAATATGAGGACACAATCAAAGAGTGCACTAAGGCATTGGAACTCAATCCTGCATATCTGAAAGCTCTGGTGAGAAGGGGGGAGGCGCATGAAAAGCTTGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATTTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAAACCATTCTGAGATTGGAACCCCTGGCAGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATCGCTAAACTGAAAGATATGGGAAATTCTTTGCTGGGCCGCTTTGGGATGAGTGTTGACAACTTCAAAGCTGTTAAAGATCCGAACACTGGTTCCTACTCTATCTCATTCCAACGCTAA 801 0.4444 MVLIQQEEVGTEERVVNLSESAETAKSSASSNVDDSKEASDGFETASDTELGGEVEEREQQHQHQELGIPPGTDSSEEASHDEELKQQKALAQANDAKLEGNELFGDGQFEEALSKYEFALQMAPDMPSSVEIRSICHSNRAVCFMKLGKYEDTIKECTKALELNPAYLKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKTILRLEPLAAEKREKMKEEMIAKLKDMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQR 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0401 266 SMART tpr_5 135 168 IPR019734 GO:0005515
Prci12g0401 266 SMART tpr_5 169 202 IPR019734 GO:0005515
Prci12g0401 266 SMART tpr_5 94 127 IPR019734 GO:0005515
Prci12g0401 266 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 24 266 - -
Prci12g0401 266 MobiDBLite consensus disorder prediction 17 36 - -
Prci12g0401 266 Gene3D Tetratricopeptide repeat domain 54 232 IPR011990 GO:0005515
Prci12g0401 266 Pfam Tetratricopeptide repeat 137 167 IPR001440 GO:0005515
Prci12g0401 266 SUPERFAMILY TPR-like 94 212 IPR011990 GO:0005515
Prci12g0401 266 ProSiteProfiles TPR repeat profile. 169 202 IPR019734 GO:0005515
Prci12g0401 266 Pfam Tetratricopeptide repeat 170 202 IPR013105 -
Prci12g0401 266 ProSiteProfiles TPR repeat profile. 135 168 IPR019734 GO:0005515
Prci12g0401 266 MobiDBLite consensus disorder prediction 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0401 Prci-Chr12 3547750 3552262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0401 64 236 Calmodulin-binding Proteins AT3G25230 32.632 5.42e-15 72.8