Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0399 ATGGCGGTGACGAAGCTTCTCTCTCTCTACATTTTCATGTTTATCTTGTTATTCTGCAGCTACCTCACCAACAACTCCAGTGCCGTTGCAGCCTCTTTGCCGCCTTCTTCGGATGTCGAGCTTCTCTTGGGTAAAATCAGAGCTGCCCTTCAAGGTAACGCCGATAACCTCGTTTTGTCTTCATGGAATTCCTCTATACCTCTTTGCCAATGGAGGGGACTCAAATGGGTTTTCTCTAATGGCTCTCCCCTGTCATGCAATGACTTGTCTTCACCACAATGGACCAATCTTTCGCTTTTCAGAGACCCCTCTTTACATCTACTCTCTCTTCAGCTTCCTTCTGCGAATCTCTCTGGTTCGCTTCCGAGGGAGCTTTCAGAGTTTCCTATGCTTCAGAGTCTCTACCTGAACATCAATTCGTTGAAAGGGACAATTCCTATTGAGCTTGGGTATAGTTCCTCACTTAACGATGTCGTTTTGGATGACAATATGTTGAGTGGAGCTTTACCACCGTCGATCTGGAATTTGTGTGATAAGCTCGTTTCGCTTAGACTCCATGGCAACATGTTTTCTGGGTCTCTTCCTGAACCGGCATTGCCCGAATCTTCTTGCAAGAATCTGCAATTTCTTGATTTGGGTAATAACAAGTTTTCTGGGGTTTTCCCTGAATTCATCACACGTTTTGGTGGGCTGAAACAGCTTGACTTGGGGAATAATATGTTTACGGGTTCAATTCCTCAGAGCTTAGCTGGGTTAATTAGACTTGAGAAACTGAATCTTTCTCACAACAATTTTAGTGGGGTTTTACCTACTTTTGGTGAATCATCCAAATTTGGTGTGGAGGTTTTTGAAGGGAATAACCCTGGCTTGTGTGGGCTACCCTTAAGAACTTGTAGTGGAACTCCTAGATTGAGCTCTGGTGCAGTTGCTGGTATAGTTATCACTCTCATGACTGGAGCTGTGGTTTTTGTTTCTTTGCTTATTGGGTATATGCAAAACAAGAGGAGGAAGGGTAAGGGAGATAGTGAGGATGAATTGGAGGAAGATGAAGATGATGATGATGAAGAAAATGGTGGTGGTAATGGTGCTATAGGTGGTGGTGAAGGGAAGCTTATGTTGTTCCAAGGTGGTGAGAACTTGTCATTGGACGATGTGTTGAATGCGACAGGGCAAGTTATGGAGAAGACGTGTTATGGTACTGTTTATAAGGCAAAGCTTGCTGAAGGAGGAACCATTGCTTTGAGATTATTAAGAGAAGGCAGCTGCAAGGATAGGGCTTCGTGCTTGCTCGTGATTAAGCAATTGGGAAGGATTCGACATGAGAATTTGATTCCTTTGAGAGCCTTCTATCAAGGGAAGAGAGGAGAGAAGCTTCTTATTTATGATTATCTTCCTCTCAGAACACTTCACGATCTTTTACATGAAACTAAAACTGGAAAACCAGTGCTAAACTGGGCCAGGCGACACAAGATTGCGTTGGGAATAGCCAGGGGACTAGCATATCTTCATACAGGACTTGATGTTCCAATCACTCATGGGAATGTACGATCCAAGAACGTGCTAGTGGACGAGTTCTTTGTTGCCAGGCTCTCTGAGTTTGGGCTGGACAAGCTAATGATTCCTGCTGTAGCTGATGAAATGGTAGCACTTGCAAAAACAGATGGCTACAAGGCTCCAGAGCTTCAGAAGATGAAGAAATGTAACTCAAGGACCGATGTTTATGCATTTGGGATATTACTGCTGGAGATATTGATAGGGAAGAAACCGGGTAAGAACGGGAGGAGTGGGGAGGTCGTGGATTTGCCTTCCATGGTGAAAGTGGCAGTGTTGGAGGAGACAACCATGGAAGTGTTTGACGTGGAGCTTCTGAAAGGGATAAGGAGTCCAATGGAAGATGGGTTGGTTCAGGCATTGAAGGTAGCAATGGGATGTTGTGCTCCAGTGCCTTCAGTGAGACCAAGCATGGAAGAAGTTGTGAGACAGTTGGAAGAGAATAGGCCAAGGAATAGGTCTGCTTTATACAGCCCTACAGAAACAAGAAGTGGGAGTGGCACTCCTTTTTGA 2064 0.4472 MAVTKLLSLYIFMFILLFCSYLTNNSSAVAASLPPSSDVELLLGKIRAALQGNADNLVLSSWNSSIPLCQWRGLKWVFSNGSPLSCNDLSSPQWTNLSLFRDPSLHLLSLQLPSANLSGSLPRELSEFPMLQSLYLNINSLKGTIPIELGYSSSLNDVVLDDNMLSGALPPSIWNLCDKLVSLRLHGNMFSGSLPEPALPESSCKNLQFLDLGNNKFSGVFPEFITRFGGLKQLDLGNNMFTGSIPQSLAGLIRLEKLNLSHNNFSGVLPTFGESSKFGVEVFEGNNPGLCGLPLRTCSGTPRLSSGAVAGIVITLMTGAVVFVSLLIGYMQNKRRKGKGDSEDELEEDEDDDDEENGGGNGAIGGGEGKLMLFQGGENLSLDDVLNATGQVMEKTCYGTVYKAKLAEGGTIALRLLREGSCKDRASCLLVIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHETKTGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHGNVRSKNVLVDEFFVARLSEFGLDKLMIPAVADEMVALAKTDGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEVVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKVAMGCCAPVPSVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSGTPF 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0399 687 Pfam Leucine rich repeat 206 265 IPR001611 GO:0005515
Prci12g0399 687 FunFam Leucine-rich repeat receptor-like protein kinase 204 298 - -
Prci12g0399 687 SUPERFAMILY Protein kinase-like (PK-like) 396 663 IPR011009 -
Prci12g0399 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 196 IPR046959 -
Prci12g0399 687 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Prci12g0399 687 MobiDBLite consensus disorder prediction 344 358 - -
Prci12g0399 687 MobiDBLite consensus disorder prediction 336 362 - -
Prci12g0399 687 Gene3D Ribonuclease Inhibitor 202 301 IPR032675 -
Prci12g0399 687 MobiDBLite consensus disorder prediction 663 687 - -
Prci12g0399 687 SUPERFAMILY L domain-like 78 297 - -
Prci12g0399 687 MobiDBLite consensus disorder prediction 668 687 - -
Prci12g0399 687 Gene3D Phosphorylase Kinase; domain 1 371 463 - -
Prci12g0399 687 Gene3D Transferase(Phosphotransferase) domain 1 465 679 - -
Prci12g0399 687 ProSiteProfiles Protein kinase domain profile. 387 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0399 687 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 465 674 - -
Prci12g0399 687 Pfam Protein tyrosine and serine/threonine kinase 391 662 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0399 Prci-Chr12 3523578 3526969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0399 1 687 Receptor kinase-like Gene Family AT3G24660 72.529 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci12g0399 PK_Tyr_Ser-Thr 2.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0399 - - gmx:100814814 1073.92