Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0392 ATGAATAATGTTGGTGTGGAACCGCAACTGCAAGAGGGAGATTTCTATGAAGAAGAAGAAGAAACAGTTGTGGCGGCGGTTAAGGAGCGAGAGATCTGGCTTCAGAATAATAACCATAGGAATAATAATAATATGCAAGATGATGATGAGGATGATCTGCTTGCCAGTGTATTGGACGACGCTTCGCTGTTCTACGCCGACGATGACTTCCCTTCTCTCCCAGATTTCTCATGCATGTCATCTTCTTCTTCTTCTTCATCTTCACCGCCAGCAGCCACAGTCAAAACCGTCACGTGCGCTTCTTCCTCCTCCACCAATACATCGTCGTCTAATTCCGCTGCTTCCTGGGCGAATCTCCGGTCCGATAATGTAGGGCCTCCTCTCCCACCGCCACAGACACAGCCGCCGGCGTTATCCTCCACTGCTTCTATGGAGATCCCGCAACCGCCAGATCATCAAGGCGGCAATAACGGCGGCGGCGGAGGAGATTGTCTGGATATGATGGGCACTTTTGGGCATATGGAATTCATGGAGACCAACGAATTCTTCGATCCTTCATCTATGTTTGAAAATGGAGAGAATCTATTAGACGAATTGACACGGTTAGACCCGAATCCACCGGAAGAGGGACATGCAAGTGGTGAAATGATAGTACAGGAGGAGCAGCAACAGCAAGAGCAGCATCAACCGCCGCCATTGCCAGAGACGGCGGCTACGGACGAAGAGATGAGCTCGGTGTTCTTGGAGTGGCTAAGGATGAACAAGGACAGCGTGTCGGCTAGTGATTTGAGGAACGTGAGGCTGAAAAAGGCGACAATAGAATGTGCAGCTAAGCGTCTTGGTGGAGGAAAAGAAGGCATGAAGCAGTTACTGAAGTTAATTCTGGAATGGGTTCAGACCAGCCATCTTCAGAAGAAAAGACGGATTATCGAAAATCAGGATGATGACAATTTTCTCATGACTCAAGTTCAGGACACCGCAAACCCTAGCTCTCATAATCTGAACCACCAGCTTTCATTTGGACCGGAATGGATCTTTCAGCCGCCTTACGGCGTTGATCCTGCTGCGGCTCCTGCAGCGGCCCCGCCGTCATTTCCCCAACCACTGGTTGGGTATAATAATAACAATAACAACCTGGGAGACCCGTTTTCAAATGGAGCTTCAAGTGAATTTCACGTGCTGGATTCTTCTCAGTCATGGCCTCATTCTCAGTTCACTGTCTACAACAACCAGCCATATGGGGAAAATAATTTACACCCGACGACAATGACGCCGTTAGCGGCAGCGGCATTTGGTGGTTATGGGAATCAGTTTCCATATCATCCATATTTTCACGGCACCGGCCCGGATAGATTGGGTCCTTTGGCGACCAAAGAAGCGAGGAAGAAGAGAATGGCGAGGCAGAGACGGCATTCATCTCACCATAGGCATCACAATGTCCAAGACCAACAAAACCAGCAGAATCAAAGTAGCGATTATTGCACAGCTGCTACAGTAGCCCCGCATGCAAATCCGCCGAACTGGTTGTATTGGCCACCGGTGGCCACGTCCGGCAGTGGAGCTGCTTCTGTTGCGCCAATGGCTCAGCCGGAGCCACCGTCGACAGCGAGAAATGCAGGGGATCGGACCGCGGTGCAGTCTCACCAGAATTATCAACATACCCGGGTCTCATCAGATAAACGACAGGGATGGAAGCCTGAGAAGAACTTGAAGTTCCTTCTGCAGAAGGTGTTAAAGCAAAGCGACGTGGGTAATCTGGGGAGGATAGTGCTGCCAAAGAAAGAAGCAGAAAGTCATTTGCCAGAACTGGAGGAAAGAGATGGAATTTCTATAGCAATGGAAGACATTGGAACTTCTCGTGTTTGGAACATGCGCTACAGATACTGGCCGAACAACAAAAGCAGGATGTATCTACTTGAGAATACTGGAGACTTTGTGAGAGCTAACGGACTTCAAGAAGGAGACTTCATAGTGATATATTCAGATGTAAAATGCGGCAAATATATGATAAGGGGTGTGAAAGTGAGGCAAGCAGGAGCGAGAGTGGAGACAAAGAAAGGCGCAGCAGGAAAAAACCAGAAGGCTAATTATGGCTCTCCATCATCACCCAAGAAGATGAACGAGAAAAAGCAATAA 2136 0.4878 MNNVGVEPQLQEGDFYEEEEETVVAAVKEREIWLQNNNHRNNNNMQDDDEDDLLASVLDDASLFYADDDFPSLPDFSCMSSSSSSSSSPPAATVKTVTCASSSSTNTSSSNSAASWANLRSDNVGPPLPPPQTQPPALSSTASMEIPQPPDHQGGNNGGGGGDCLDMMGTFGHMEFMETNEFFDPSSMFENGENLLDELTRLDPNPPEEGHASGEMIVQEEQQQQEQHQPPPLPETAATDEEMSSVFLEWLRMNKDSVSASDLRNVRLKKATIECAAKRLGGGKEGMKQLLKLILEWVQTSHLQKKRRIIENQDDDNFLMTQVQDTANPSSHNLNHQLSFGPEWIFQPPYGVDPAAAPAAAPPSFPQPLVGYNNNNNNLGDPFSNGASSEFHVLDSSQSWPHSQFTVYNNQPYGENNLHPTTMTPLAAAAFGGYGNQFPYHPYFHGTGPDRLGPLATKEARKKRMARQRRHSSHHRHHNVQDQQNQQNQSSDYCTAATVAPHANPPNWLYWPPVATSGSGAASVAPMAQPEPPSTARNAGDRTAVQSHQNYQHTRVSSDKRQGWKPEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAESHLPELEERDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQAGARVETKKGAAGKNQKANYGSPSSPKKMNEKKQ 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0392 711 MobiDBLite consensus disorder prediction 519 562 - -
Prci12g0392 711 CDD BfiI_C_EcoRII_N_B3 572 673 - -
Prci12g0392 711 Gene3D - 565 681 IPR015300 -
Prci12g0392 711 MobiDBLite consensus disorder prediction 679 711 - -
Prci12g0392 711 FunFam B3 domain-containing transcription factor FUS3 570 685 - -
Prci12g0392 711 MobiDBLite consensus disorder prediction 462 477 - -
Prci12g0392 711 MobiDBLite consensus disorder prediction 539 553 - -
Prci12g0392 711 SMART B3_2 574 676 IPR003340 GO:0003677
Prci12g0392 711 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 229 687 IPR044800 GO:0003700
Prci12g0392 711 MobiDBLite consensus disorder prediction 100 166 - -
Prci12g0392 711 MobiDBLite consensus disorder prediction 220 239 - -
Prci12g0392 711 SUPERFAMILY DNA-binding pseudobarrel domain 573 668 IPR015300 -
Prci12g0392 711 MobiDBLite consensus disorder prediction 459 493 - -
Prci12g0392 711 Pfam B3 DNA binding domain 575 671 IPR003340 GO:0003677
Prci12g0392 711 ProSiteProfiles B3 DNA-binding domain profile. 574 676 IPR003340 GO:0003677
Prci12g0392 711 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0392 Prci-Chr12 3466922 3469670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0392 30 694 B3 DNA Binding Superfamily AT3G24650 47.067 2.21e-149 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci12g0392 B3 5.2e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0392 K09287 - gmx:100795226 575.474