Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0379 ATGTCAAAAGCAGGCTCATCAAGATGGAGTCCAACCCCAGAGCAGCTGATGATTTTGGAGGAACTGTACAGGAGTGGGATTAGAACTCCTAGTGCCTCCCAAATCCAACACATTACAACTCACCTTTGTTTCTATGGTAGGATTGAAGGAAAGAATGTGTTCTACTGGTTTCAGAATCACAAGGCCAGGGATAGGCAGAAGCTCAGGAGGAAACTAAACAAGCAGCTCCAACTACAACAACTGCAACAGCAGCAGCAGCAGCAACATCAGATGCTAGTCCACCAATGCCAGGTGATTAATCAGGATAAGACTCATCGTTGGTTTTTTGGTGGCTTTGATTCTTCTCTTGGTTCTTCTGCCCAACAAGTTTCTTTTTATAACCCAGCCATCTTGCTTTCTCAGGGAGAAGCAGGAGAGACATCATCAGAGACATGGAAGATTGCGCAGAACCAACAAAGTGAGGTGGATAAAACAACGAGTACGTCATCACTTTACAACTATGGTATGATGAATTGTTGGAGTTTTGTCGATGTTAATGAAGCATCCTCATGTTGCACAAGCCGGCCTCTCAAGACTCTTGACCTGTTTCCAACCGCATCCTCCAAACTCAGAGAAGACCCCTTAAACCTAGAACTCTGA 639 0.4476 MSKAGSSRWSPTPEQLMILEELYRSGIRTPSASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQLQQQQQQQHQMLVHQCQVINQDKTHRWFFGGFDSSLGSSAQQVSFYNPAILLSQGEAGETSSETWKIAQNQQSEVDKTTSTSSLYNYGMMNCWSFVDVNEASSCCTSRPLKTLDLFPTASSKLREDPLNLEL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0379 212 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Prci12g0379 212 SMART HOX_1 4 71 IPR001356 GO:0003677
Prci12g0379 212 CDD homeodomain 8 67 IPR001356 GO:0003677
Prci12g0379 212 FunFam WUSCHEL-related homeobox 4 6 73 - -
Prci12g0379 212 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 203 IPR044555 GO:0003700|GO:0099402
Prci12g0379 212 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Prci12g0379 212 SUPERFAMILY Homeodomain-like 3 69 IPR009057 -
Prci12g0379 212 Gene3D - 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0379 Prci-Chr12 3310370 3314649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0379 1 74 Wox Gene Family AT2G28610 82.432 1.28e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci12g0379 Homeodomain 6.4e-18 CL0123