Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0378 ATGCTCCTCCAAAAGGAACATGGGCATGAGACTTGCTCATCAAGATGGAGTCCAACCCCAGAGCAGCTGATGATTTTGGAGGAACTGTACAGGAGTGGGATTAGAACTCCTAGTGCCTCCCAAATCCAACACATTACAACTCACCTTTGTTTCTATGGTAGGATTGAAGGAAAGAATGTGTTCTACTGGTTTCAGAATCACAAGGCCAGGGATAGGCAGAAGCTCAGGAGGAAACTAAACAAGCAGCTCCAACTACAACAACTGCAACAGCAGCAGCAGCAGCAACATCAGATGCTAGTCCACCAATGCCAGGTGATTAATCAGGATAAGACTCATCGTTGGTTTTTTGGTGGCTTTGATTCTTCTCTTGGTTCTTCTGCCCAACAAGTTTCTTTTTATAACCCAGCCATCTTGCTTTCTCAGGGAGAAGCAGGAGAGACATCATCAGAGACATGGAAGATTGCGCAGAACCAACAAAGTGAGGTGGATAAAACAACGAGTACGTCATCACTTTACAACTATGGTATGATGAATTGTTGGAGTTTTGTCGATGTTAATGAAGCATCCTCATGTTGCACAAGCCGGCCTCTCAAGACTCTTGACCTGTTTCCAACCGCATCCTCCAAACTCAGAGAAGACCCCTTAAACCTAGAACTCTGA 660 0.45 MLLQKEHGHETCSSRWSPTPEQLMILEELYRSGIRTPSASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQLQQQQQQQHQMLVHQCQVINQDKTHRWFFGGFDSSLGSSAQQVSFYNPAILLSQGEAGETSSETWKIAQNQQSEVDKTTSTSSLYNYGMMNCWSFVDVNEASSCCTSRPLKTLDLFPTASSKLREDPLNLEL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0378 219 CDD homeodomain 15 74 IPR001356 GO:0003677
Prci12g0378 219 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 7 210 IPR044555 GO:0003700|GO:0099402
Prci12g0378 219 ProSiteProfiles 'Homeobox' domain profile. 9 74 IPR001356 GO:0003677
Prci12g0378 219 FunFam WUSCHEL-related homeobox 4 13 80 - -
Prci12g0378 219 Pfam Homeodomain 14 73 IPR001356 GO:0003677
Prci12g0378 219 SMART HOX_1 11 78 IPR001356 GO:0003677
Prci12g0378 219 SUPERFAMILY Homeodomain-like 14 73 IPR009057 -
Prci12g0378 219 Gene3D - 8 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0378 Prci-Chr12 3310367 3314649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0378 13 81 Wox Gene Family AT2G28610 85.507 5.49e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci12g0378 Homeodomain 8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0378 - - pcin:129289561 396.356