Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0358 ATGGCTGAGGTGAAATCGGAGGAGTGTTGCCTGGAGAATAAACAAACTATTGCTGCTCCTAGCTCCTCTATATCTGAAAGCAGTGGCAGTGCTTTACCTAAGTCCCCTGGAATTTGTAGCCCAACATCTACATCACCCTCTCATCGGAGAACTACTGGCCCCATAAGGCGAGCAAAGGGTGGTTGGACGGCAGAAGAGGATGAGACACTAAGGAATGCTGTTGCAATTTTCAAGGGAAAGAATTGGAAGAAAATAGCTGAGTTTTTCCCTGATAGATCAGAAGTGCAATGTCTCCATAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGGCCTTGGACTCAAGAGGAGGATGATAAAATTGTTGAACTAGTGTCAAAATATGGGCCTACAAAATGGTCAGTAATAGCCAAGTCCCTGTCTGGTCGTATAGGGAAACAGTGCCGAGAGCGATGGCACAACCATCTTAATCCTGACATAAAGAAGGATGCCTGGACTTCGGCAGAGGAATTAGCCCTCATCAAAGCTCATTGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTTTTGCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAGAAGTCGGACTTTTATTTAACTACCGGACAACTTCCACCAATTTCAAAGAACAGTCCAAAAGTTGATGCAAAAGATAAAATGATATGCTCTGCGACAGAAACAATTCTTGGTAGTTCAAATAAAGGATTAGATGCATCTACTGAAACATTGTCAGAAACTACAGAGATTAATAAGCAAGATGACAGTGGTACGAATCACTCAAGGCATTTAGGAACAGCAACAGATGTTGGTGATTCTTCAAATGTTCTTGCAAATGAATCTGCTGATTCTGACTGTATAGAATGCAAGCCCAAATCCTCCAATTTAGATTTCAGCTGCAGCAACTCAGAACCATTGTCAAGAGACAATTATGGAATGAATGGTGACCAAACACATGGGAAATCTGGACTTAATGGCAAGCTAGCGATTGAGCATTGTATAAATGATGGTGAAATACGTAGTAGTAGGTTGATAACAAAATCTTTTTCACGGGAAGCTCCAACTTGTGGTTCTATATGTTACGAGCCACTGCAGTTAGAGAATTTGGTTCCCTTAGATTCTCTTTATTTAAATATCTTTTGTCTCCAAAATGACTACAGCTCTACTTCCATGATGTCTCCAACTGGTTTCTTCACTCCACCTAGCGTGAAGGGTCGTGAATTTTTCAAACAAACTCCTGAATCAATATTGAAAATGGCTGCTGAGACTTACCCAAATACCCCTTCCATAATGAGGAAGAGAAAGACTGGAGTCCATGCACAAGTCACTCCCAGTAAAGTTGTGAAAGTGGATGGAGAATCTCATGCTTCTAATGGCCAGCAGGGAAATAAGAATAACACTGATTTTGAAGTTGGGAGGTTCTCTGAGAGTCCAGCAAGCCATGGCCATGGCATTGATATTCCAAATAACAAAGTTTTCAATGCATCTCCTCCCTACCGGCTAAGATCCAAGCGAACAACAGTTGTCAAGTCTGTGGAGAAACAACTTGAGCTTGCATTTGACCAAGAAAAGCACCATGGAAACAAGAGGAAAATGGGGAAGTCTACAACGTAG 1662 0.4146 MAEVKSEECCLENKQTIAAPSSSISESSGSALPKSPGICSPTSTSPSHRRTTGPIRRAKGGWTAEEDETLRNAVAIFKGKNWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSVIAKSLSGRIGKQCRERWHNHLNPDIKKDAWTSAEELALIKAHCIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKSDFYLTTGQLPPISKNSPKVDAKDKMICSATETILGSSNKGLDASTETLSETTEINKQDDSGTNHSRHLGTATDVGDSSNVLANESADSDCIECKPKSSNLDFSCSNSEPLSRDNYGMNGDQTHGKSGLNGKLAIEHCINDGEIRSSRLITKSFSREAPTCGSICYEPLQLENLVPLDSLYLNIFCLQNDYSSTSMMSPTGFFTPPSVKGREFFKQTPESILKMAAETYPNTPSIMRKRKTGVHAQVTPSKVVKVDGESHASNGQQGNKNNTDFEVGRFSESPASHGHGIDIPNNKVFNASPPYRLRSKRTTVVKSVEKQLELAFDQEKHHGNKRKMGKSTT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0358 553 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Prci12g0358 553 PANTHER MYB PROTEIN-RELATED 59 144 - -
Prci12g0358 553 FunFam Transcriptional activator Myb isoform A 111 163 - -
Prci12g0358 553 Gene3D - 58 110 - -
Prci12g0358 553 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Prci12g0358 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Prci12g0358 553 CDD SANT 113 157 IPR001005 -
Prci12g0358 553 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Prci12g0358 553 MobiDBLite consensus disorder prediction 17 64 - -
Prci12g0358 553 FunFam Transcriptional activator Myb isoform A 58 110 - -
Prci12g0358 553 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Prci12g0358 553 MobiDBLite consensus disorder prediction 250 290 - -
Prci12g0358 553 CDD SANT 62 105 IPR001005 -
Prci12g0358 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Prci12g0358 553 Gene3D - 165 237 - -
Prci12g0358 553 FunFam Transcription factor MYB3R-2 164 232 - -
Prci12g0358 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Prci12g0358 553 Gene3D - 111 162 - -
Prci12g0358 553 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Prci12g0358 553 MobiDBLite consensus disorder prediction 465 486 - -
Prci12g0358 553 MobiDBLite consensus disorder prediction 276 290 - -
Prci12g0358 553 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Prci12g0358 553 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Prci12g0358 553 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Prci12g0358 553 MobiDBLite consensus disorder prediction 250 268 - -
Prci12g0358 553 MobiDBLite consensus disorder prediction 470 486 - -
Prci12g0358 553 SMART sant 110 159 IPR001005 -
Prci12g0358 553 SMART sant 162 210 IPR001005 -
Prci12g0358 553 SMART sant 58 107 IPR001005 -
Prci12g0358 553 CDD SANT 165 208 IPR001005 -
Prci12g0358 553 MobiDBLite consensus disorder prediction 17 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0358 Prci-Chr12 3221323 3226796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0358 49 545 MYB Transcription Factor Family AT5G02320 47.348 6.48e-129 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci12g0358 Myb_DNA-binding 2.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0358 K09422 - gmx:778081 775.778