Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0344 ATGGTTGACTTCTCAGCCAACTTTGAGACACTATTGATGGAGGAAGCAGTAACGGCAGCTAATTATGGGTCAGATGGGTCAGAAGAAGATGACCTCTTGAGAGAGCTTTTGGATCATCATTATAATAACTATCATGAGTCTCCTTTCCCTTCTTCCACCATTGAACCCTGCGTAAGAAAATCAGCTTCCACCAACATTAACTCCTTGATCTCTAACATTTATTCAGGACCTACCATCTCTGATATCGAAAATGCCTTGTCCTTTACCAACCGCAAACAACATTATAATTCCCAAGACTTCTCCTTATCCAGGGTGTCGACACTGGAGAGAGGACTGAGCAAGATAGAGAATAAGTATACTCTGAAAATGAAGTGCTTTGGGAATGGGATGGGTGATGATGGATACAAGTGGAGGAAGTACGGACAGAAATATATTAAGAATAGTCCAAATCCTAGGAGCTACTATAGGTGCACTAATCCAAGGTGTAATGCCAAGAAGCAAGTGGAAAGATGCAATGATGACCCAGACACTCTTATGATAACCTATGAAGGGCTTCATCTTCACTTTGCTTATCCATGTTTGTTGATGACCCAGGCCCATGAATCCCTTTCACCTCCAACAAAAAAGGCCAAGACCAATAGCACTTCCCCGGACCAAGCCCATGAAGGTCCAATCGCACTAGAATCTGATCAGGCCCAAGTCCATGAGATTAGCAAGGGATCACAAGGGCTGCTTGAAGACATGGTGCCTTTGATGATTCGAAATCCTACAATTAGAAATTTAAATCCTTTGCAGTCTTGA 801 0.427 MVDFSANFETLLMEEAVTAANYGSDGSEEDDLLRELLDHHYNNYHESPFPSSTIEPCVRKSASTNINSLISNIYSGPTISDIENALSFTNRKQHYNSQDFSLSRVSTLERGLSKIENKYTLKMKCFGNGMGDDGYKWRKYGQKYIKNSPNPRSYYRCTNPRCNAKKQVERCNDDPDTLMITYEGLHLHFAYPCLLMTQAHESLSPPTKKAKTNSTXSPDQAHEGPIALESDQAQVHEISKGSQGLLEDMVPLMIRNPTIRNLNPLQS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0344 267 SMART WRKY_cls 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g0344 267 ProSiteProfiles WRKY domain profile. 126 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g0344 267 MobiDBLite consensus disorder prediction 204 220 - -
Prci12g0344 267 Gene3D WRKY domain 123 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci12g0344 267 Pfam WRKY DNA -binding domain 132 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g0344 267 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 38 212 IPR044810 GO:0003700
Prci12g0344 267 SUPERFAMILY WRKY DNA-binding domain 129 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci12g0344 267 MobiDBLite consensus disorder prediction 204 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0344 Prci-Chr12 3051417 3054340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0344 69 261 WRKY Transcription Factor Family AT5G43290 43.243 1.18e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci12g0344 WRKY 4.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0344 - - gmx:100810459 274.633