Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0332 ATGAGGATCAAGATAGACGACGATGATCTGGGTCCTGATCGTGAGGTTGAGTTCCAGACTGATGATGAAGAAAACCTAGCAGATAGGGTTTTTGAACATTTGAGTTCGGAGACCGATTCAGAAATTTCCCAACCCAATTTTTCCAATGACATGGACGACGTCGGTAGTCCCTCGTGGCCTCAAACCTATCGGCAATCTATGGACATGTTAACCGGTGTAACACCACCTTCAATGAGTTTGATAAGGCAAATGAGTTTATTAAGTCGATCAGTCTCTCCTATTACTGCACCAACCAAGAGGCATCGAAATGATGATTCTGATTTAAACACAGCCTTCATTCCTGAAACGATCTCACTGATACAAGAGGATCCTACCTTCAATAGCTCCAGGATAATGTCTCGACTATCTCACTTCTCTAAATATTCTAGTTGTGAATTGCCACCACCTCTAGAACAATCATCATTAGCACAGTCAATCCTCAATGGAGCCAATGTACTGTGTGGAATAGGACTTATTACAACGCCTTATGCAGTAAAAGAAGGTGGATGGTTGAGTCTGATAATACTTTTCATGTTTGCCATCATATGCTGCTATACTGGTATCTTGTTGAAGAGATGTTTAGAAAATTCTCCCGGACTCCATACTTATCCTGACATAGGGCAGGCTGCGTTTGGAGTAGCTGGTCGCCTGGGGATTGCGGCTGCTTGCGTTGAGTTTATAATCCTAATGAGTGATAACCTCTCATCACTTTTTCCCAACACCCGCTTGAAAGTGGCTGGGATTAATTTAAGCACTAATCAAGTTTTCACCATCGCATCAGCTCTCTGTGTTCTGCCGACAATTTGCTTACGAAACCTTAAACTGCTTTCGTTTCTTTCAGTTGGAGGAATATGTGCATCGATATTGGTGACTACATGCTTGCTATGGGCTGGAGTGATAGACAAAGTTGGATTTCATCCAGGTGGAAAAGCCATAAACCTTGAGAATGTATCAGTCTCAATTGGTCTCTATAGTTTTTGCTTTGCAGGCCACTCAGTTTTTCCAAATATATATTCTTCCATGAGGGAACCATCAAAGTTTTCAGTTGTTTTAGCAGCCAGCTTTGGCTTTTGCTTGGTTATATACATAGGAGTTGCGGCATTGGGCTATTTAACGTTTGGTGACTCTATCAAATCTCAATTTACTTTAAACATGCCCAAAGAATTGTATGCTTCCAATATTGCAGCCTGGACAACAGTTGTGAATCCTTTGACCAAATATGCCATCACTTTAATGCCTGTGGCACTGAGCATAGAGGAACTCTTGCCTTCAGCTCAGCTAAGATGTTATTCCATGTCCGTTTTTATCAGAACAGTTTTAGTTTTCACAAACTTGGTTTTGGCCCTCTCTATTCCTTTCTTCGGTTCTATTATGGCATTTATGGGCTCTTCAATGGCAATGCTAATTGCACTTATTTACCCATGCGCATGTTATCTCAAGCTACACCATGGCCGATTGTCAAAAGTAGAGGTGGCAAGTTGCATGTCTATTATCATTGTGGGGGCGGTGTGTTCTGCAGTTGGCACGTATTCAGCAGTTTCAAGAATAGCAGACCAGGAAGCAGATTCATGA 1611 0.419 MRIKIDDDDLGPDREVEFQTDDEENLADRVFEHLSSETDSEISQPNFSNDMDDVGSPSWPQTYRQSMDMLTGVTPPSMSLIRQMSLLSRSVSPITAPTKRHRNDDSDLNTAFIPETISLIQEDPTFNSSRIMSRLSHFSKYSSCELPPPLEQSSLAQSILNGANVLCGIGLITTPYAVKEGGWLSLIILFMFAIICCYTGILLKRCLENSPGLHTYPDIGQAAFGVAGRLGIAAACVEFIILMSDNLSSLFPNTRLKVAGINLSTNQVFTIASALCVLPTICLRNLKLLSFLSVGGICASILVTTCLLWAGVIDKVGFHPGGKAINLENVSVSIGLYSFCFAGHSVFPNIYSSMREPSKFSVVLAASFGFCLVIYIGVAALGYLTFGDSIKSQFTLNMPKELYASNIAAWTTVVNPLTKYAITLMPVALSIEELLPSAQLRCYSMSVFIRTVLVFTNLVLALSIPFFGSIMAFMGSSMAMLIALIYPCACYLKLHHGRLSKVEVASCMSIIIVGAVCSAVGTYSAVSRIADQEADS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0332 536 PANTHER OS05G0424000 PROTEIN-RELATED 162 516 - -
Prci12g0332 536 MobiDBLite consensus disorder prediction 37 55 - -
Prci12g0332 536 MobiDBLite consensus disorder prediction 1 55 - -
Prci12g0332 536 Pfam Transmembrane amino acid transporter protein 152 525 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0332 Prci-Chr12 2992484 2996699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0332 3 535 Amino Acid or Auxin Permease AAAP Family AT5G02180 47.662 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0332 K15015 - qsa:O6P43_016746 648.277