LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci12g0331	ATGTTTGTGAAGATTATGGCGTTGGCGTTTTTGTTGGTTACAGCAATAGTACCAGTGAGAGGTGAAGATACAAGTTTCACCTTTAACAATGGCTTCCTGTCTGCTAATTTAACTATGGACGGTCTTTGTTCCATCACTTCCAATGGCCTCCTCCAACTCACCAATGAAACCAGGCTGCAAAAGTGTCATGCTTTTTACCCAAATCCAATAGGTTTCTCAAACACTTCATCTTTCTCCACCACTTTCGTTTTCGCCATTAGACCTCAATATCCAACTCTGAGTGGTCATGGATTAGCTCTTGTAGTTTCTCCAGCAAAAGCATTTCCAGGTGCTCTGGGCAGTCAATACCTCGGCCTCTTCAATGGAACCAACAATGGCAACCCCAAAAATCATGTGCTCGCAGTGGAGTTTGACCCTGTTCAGAACAACGAGCTTGGGGATATCAATGATAACCATGTTGGAATTGATATTAACGGCTTGAACTCAACAAAATCTGCTCCTGTAGGATATTATGTTAATGGGTTGGAGTTTCATAATTTGAGCCTCATCAGTGGCCTTCCGATGCAGGTGTGGGTGGATTATGATGGAGCCAACAAGCAAATCAATGTCACACTAGCTCCGATCAACTTGAACAAACCCCAAACACCATTGTTAATGTTGTCCCAAGATCTTTCTCACATTCTAAAAAATCCTAGTTATGTCGGATTCTCATCTTCGACAGGGTCACTCGTAGCTTCTCACTATGTTCTTGGTTGGAGTTTCAAGGTCAATGGGGAAGCTCAAAACCTTGTAACCTCTGAACTCCCAAAGCTACCACGACTTGGAGGAAAAAAACAATCTATGATTTTGTTAATTGGGTTACCTTTGTTTTTTCTCTGTTTAATTATTTTGGCGAGTTTATCTATAGTTTATTACATAAACAAGAGAAGGAAGTTTTCTGAGATTGTGGAGAAGTGGGAGGAAGACTATGGTGGTCATAGGTTTAAATACAAAGATCTCTACTTGGCCACAAAAGAATTTGGGGAGACAGAGCTTTTGGGAAGTGGTGGATTTGGAAAGGTGTATAAAGGTACAATGCCTGGTTCGACAATGGAGGTTGCTGTGAAGAAAGTATCCCACGAATCCCGACAGGGAATGAAGGAATTCATAGCAGAAATTGTGAGTATCGGTCGCGTTCGTCATCGAAACCTCGTATCTCTTTTGGGATATTGCAGGCGAAAAGGTGAGCTCCTTTTAGTCTATGACTTCATGCCCAATGGAAGTTTAGATAAATATCTCTTTAACCAACCCAAGGAGACACTAAATTGGATGCAAAGATTCACAATCATCAAAGGCATAGCTTCAGGTTTGTGTTATCTACATGAAGAATGGGAGCAGGTCGTGGTTCACAGGGACATAAAAGCAAGCAATGTTTTGCTAGATTCAGAGCACAATGGAAGGCTAGGAGATTTTGGTCTAGCAAGGTTATATGATCATGGGAGTGATCCTGCAACTACACATGTGGTCGGGACTTTTGGGTATCTTGCACCGGAGAACACAAGAACAGGGAAAGCGACGACAAAGACTGATGTTTTTGCTTTTGGTGCGTTTTTGCTCGAGGTTGCTTGTGGAAGAAGGCCTATTGAGCAAGGAAGTGATGGTGAGAGCGTGATTTTGGTGGATTGGGTTCATGGGCTGTGGAAGAGGGGTGAGATCATTGAGGCAATAGATCAAAATTTAGGAAGAGATTACAGAGCAGAGGAGGTTGAATTGGTGTTGAAGCTTGGACTTTTGTGTTCAAATTCTCAGCCTTTAAGTAGGCCAAGCATGCGTCAAGTTATGCAGTATTTGAACAGGGATGTGCCTTTGCCTGATTTGTCTTTGATAATCTCAACTCCTTCTTGTTTTGAGTTCAAATTTGGGATTCATAAAGATTTTGATGACATCGGAATGTCCTTTCCATCTTCTAGCACGGGAGGCTGTTTTTCTCGTAGTTCAATGCCTGAATCGGTTCTCTCTGGTGGTCGTTGA	2010	0.4229	MFVKIMALAFLLVTAIVPVRGEDTSFTFNNGFLSANLTMDGLCSITSNGLLQLTNETRLQKCHAFYPNPIGFSNTSSFSTTFVFAIRPQYPTLSGHGLALVVSPAKAFPGALGSQYLGLFNGTNNGNPKNHVLAVEFDPVQNNELGDINDNHVGIDINGLNSTKSAPVGYYVNGLEFHNLSLISGLPMQVWVDYDGANKQINVTLAPINLNKPQTPLLMLSQDLSHILKNPSYVGFSSSTGSLVASHYVLGWSFKVNGEAQNLVTSELPKLPRLGGKKQSMILLIGLPLFFLCLIILASLSIVYYINKRRKFSEIVEKWEEDYGGHRFKYKDLYLATKEFGETELLGSGGFGKVYKGTMPGSTMEVAVKKVSHESRQGMKEFIAEIVSIGRVRHRNLVSLLGYCRRKGELLLVYDFMPNGSLDKYLFNQPKETLNWMQRFTIIKGIASGLCYLHEEWEQVVVHRDIKASNVLLDSEHNGRLGDFGLARLYDHGSDPATTHVVGTFGYLAPENTRTGKATTKTDVFAFGAFLLEVACGRRPIEQGSDGESVILVDWVHGLWKRGEIIEAIDQNLGRDYRAEEVELVLKLGLLCSNSQPLSRPSMRQVMQYLNRDVPLPDLSLIISTPSCFEFKFGIHKDFDDIGMSFPSSSTGGCFSRSSMPESVLSGGR	669

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci12g0331	669	ProSitePatterns	Protein kinases ATP-binding region signature.	346	370	IPR017441	GO:0005524
	Prci12g0331	669	SUPERFAMILY	Concanavalin A-like lectins/glucanases	24	275	IPR013320	-
	Prci12g0331	669	FunFam	L-type lectin-domain containing receptor kinase V.9	23	261	-	-
	Prci12g0331	669	CDD	lectin_legume_LecRK_Arcelin_ConA	24	258	IPR001220	GO:0030246
	Prci12g0331	669	Gene3D	Phosphorylase Kinase; domain 1	325	416	-	-
	Prci12g0331	669	FunFam	L-type lectin-domain containing receptor kinase S.4	417	622	-	-
	Prci12g0331	669	SMART	serkin_6	340	610	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g0331	669	Gene3D	-	22	270	-	-
	Prci12g0331	669	Pfam	Protein kinase domain	342	608	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g0331	669	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	461	473	IPR008271	GO:0004672\|GO:0006468
	Prci12g0331	669	CDD	STKc_IRAK	346	612	-	-
	Prci12g0331	669	FunFam	Lectin-domain containing receptor kinase A4.3	325	416	-	-
	Prci12g0331	669	PANTHER	-	39	615	-	-
	Prci12g0331	669	ProSiteProfiles	Protein kinase domain profile.	340	610	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g0331	669	Gene3D	Transferase(Phosphotransferase) domain 1	417	623	-	-
	Prci12g0331	669	SUPERFAMILY	Protein kinase-like (PK-like)	321	623	IPR011009	-
	Prci12g0331	669	Pfam	Legume lectin domain	24	268	IPR001220	GO:0030246
	Prci12g0331	669	MobiDBLite	consensus disorder prediction	650	669	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci12g0331	Prci-Chr12	2959241	2961463	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci12g0331	22	669	Receptor kinase-like Gene Family	AT2G37710	59.847	0.0	775

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Prci12g0331		Pkinase	9.8e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci12g0331	-		-	gmx:100802293	880.937