Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0330 ATGTTTTTGAGACTTCCAACGTTGGTGTTTTTGTTGGTGCTGGTGAGTCTGAGGAGTGGTGAAGAAACCAGTTTCATCTTTAATACTGGTTTCCACTCTGCTAACTTAACCATGGATGGTCGGTCTTCCATCACTTCCAATGGCCTCCTCCAGCTCACCAATGAAACTAGGCTGCAAAAGGGCCATGCTTTTTATCCTAATCCAGTTGTTTTCTCAAACACTTCTTCTTTCTCCACCACTTTCGTCTTCGCCATTAGACCTCAATATCCAACTCTCAGTGGTCATGGATTAGCTTTTGTAATTTCTCCAACAAAAGCATTGCCAAATGCTATTCCCTCTCAGTACCTTGGCCTCTTCAATGAAACCAACAACGGTGACTCCACAAACCACATGCTTGCAATAGAACTCGACCCAGTACAAAACATCGAGTTCGATGATATCAATGATAATCATGTTGGAATTGATATTAATGGCTTGAATTCGACAAGATCTGCTCCTGCTGGATATTATGGTAACGAATCTCAGTTTCACAATTTGACCCTGATAAGTGGCCTTCCGATGCAAGTGTGGGTGGACTATGATGGAGTCAAGAAGCACATTAGTGTTGTCCTAGGTCCAATCAATATTACAAAGCCCCAAACTCCATTATTAGCTTTGTCTCGAGATCTTTCTCATATTCTAACTAATCCCAGTTATGTCGGATTCTCATCTTCCACTGGTTCACAACTCTTAGCTTCTCACTATGTTCTTGGATGGAGTTTCCAAGTTAATGGGGAAGCTCAGAATCTCGTAATCTCTGATCTCCCAAAGCTACCAGGACTTGGAGGGAAAAAACAATCCATGATTTTGCCAATTGGGTTACCTTTGTTTTCACTATGTTTAATTATTCTTGTGAGTTTATATATAGTTTATTACATATACAGGAAAAGGAAGTTTTCTGAGATCGTTGAAGAGTGGGAGAAGGATTATGTTTCTCAAAGGTTCAAATACAAAGATATCTACCTTGCCACAAAAGGATTCAGAGAGAAGGAGCTTCTGGGAAGTGGTGGATTTGGAAAAGTGTACAAAGGGACAATGCCGAGTTCGAAAATTGAGGTTGCTGTGAAGAAAGTGTCCCATGAATCCCGACAAGGCATGAGAGAATTTATAGCAGAAATCGTGAGCATTGGTCGTCTTCGCCACCGAAATCTCGTATCCCTTCTAGGGTATTGTAGGCGAAAAGGTGAGCTTCTTCTAGTCTACGATTTCATGCCTAATGGAAGCTTAGATAAATATCTTTATAACCAACCCATGGCAGTGACATTAAGTTGGTTGCAAAGATTCAGGATCATCAAAGGTGTAGCTTCAGGATTGTGTTATCTACATGAAGAATGGGATCAATTAGTGGTTCACAGAGACATAAAAGCAAGCAATGTTCTATTAGATTCTGATTTTAACGGAAGGTTAGGAGATTTTGGTCTTGCAAGATTATACGATCATGGTAATGATCCTACAACTACACATGTGGTCGGGACTCTTGGGTATCTCGCACCAGAGACCACAAGAACAGGGAGAGCCACGACAAAATCAGATGTTTTTTCTTTTGGTGCATTTTTATTAGAGGTTGTATGTGGAAGCAGACCTATAGAGCAAGGAAGTGAAGGTGAGAGTGTGGTTTTGGTGGATTGGGTTTATGGATACTGGCAAAGGGGAGAGATCATTGAGGCAAAAGACGAAAATTTAAGAAGAGATTACATTGCAGAAGAGGTTGAATTAGTGTTGAAGCTTGGACTCTTGTGTTCAAATTCTCAGCCGTCAAATAGGCCAAGCATGCGTCAAGTTGTGCAGTATTTAAATGGAGATGTAACTTTGCCTAATTTGTCCAGTCATAAAATGTTTGACAACATTGACGGAGTGTCCTTTTCATCTCCTATTATGGACGATTATTTCTCTCATAGTTCAATACCTGAATCACAGCTTTCTGGTGGTCGTTGA 1974 0.4063 MFLRLPTLVFLLVLVSLRSGEETSFIFNTGFHSANLTMDGRSSITSNGLLQLTNETRLQKGHAFYPNPVVFSNTSSFSTTFVFAIRPQYPTLSGHGLAFVISPTKALPNAIPSQYLGLFNETNNGDSTNHMLAIELDPVQNIEFDDINDNHVGIDINGLNSTRSAPAGYYGNESQFHNLTLISGLPMQVWVDYDGVKKHISVVLGPINITKPQTPLLALSRDLSHILTNPSYVGFSSSTGSQLLASHYVLGWSFQVNGEAQNLVISDLPKLPGLGGKKQSMILPIGLPLFSLCLIILVSLYIVYYIYRKRKFSEIVEEWEKDYVSQRFKYKDIYLATKGFREKELLGSGGFGKVYKGTMPSSKIEVAVKKVSHESRQGMREFIAEIVSIGRLRHRNLVSLLGYCRRKGELLLVYDFMPNGSLDKYLYNQPMAVTLSWLQRFRIIKGVASGLCYLHEEWDQLVVHRDIKASNVLLDSDFNGRLGDFGLARLYDHGNDPTTTHVVGTLGYLAPETTRTGRATTKSDVFSFGAFLLEVVCGSRPIEQGSEGESVVLVDWVYGYWQRGEIIEAKDENLRRDYIAEEVELVLKLGLLCSNSQPSNRPSMRQVVQYLNGDVTLPNLSSHKMFDNIDGVSFSSPIMDDYFSHSSIPESQLSGGR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0330 657 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524
Prci12g0330 657 PANTHER - 19 615 - -
Prci12g0330 657 FunFam L-type lectin-domain containing receptor kinase S.4 417 624 - -
Prci12g0330 657 CDD STKc_IRAK 346 613 - -
Prci12g0330 657 CDD lectin_legume_LecRK_Arcelin_ConA 23 258 IPR001220 GO:0030246
Prci12g0330 657 Pfam Legume lectin domain 23 268 IPR001220 GO:0030246
Prci12g0330 657 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Prci12g0330 657 Pfam Protein kinase domain 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0330 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 274 IPR013320 -
Prci12g0330 657 FunFam L-type lectin-domain containing receptor kinase V.9 22 261 - -
Prci12g0330 657 SUPERFAMILY Protein kinase-like (PK-like) 323 623 IPR011009 -
Prci12g0330 657 ProSiteProfiles Protein kinase domain profile. 340 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0330 657 Gene3D - 21 268 - -
Prci12g0330 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Prci12g0330 657 FunFam Lectin-domain containing receptor kinase A4.3 325 416 - -
Prci12g0330 657 Gene3D Transferase(Phosphotransferase) domain 1 417 631 - -
Prci12g0330 657 SMART serkin_6 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0330 Prci-Chr12 2955920 2958146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0330 19 657 Receptor kinase-like Gene Family AT2G37710 59.817 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci12g0330 Pkinase 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0330 - - tcc:18597713 867.84