Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0328 ATGTCTGTGAAGAAGCTGATGGCGATGATGCTTTTGGTGGTGGTGATATCAACGGTACAAGTTAGTGGTGAAGATACAAGCTTCATCTTTAACAATGGATCATCAGCTAATTTAACCATGGATGGTATTTCTGAGATCACCTCCAATGGCTTGCTCCGACTCACCAATGAAACCAGGCAAGAAAAAGGTCATGCTTTTTACCATCCAATGGTTTTGAATAACTCTTCTTTCTCTACCACTTTCGTCTTCGCAATTAAATCAGAATACAGAACTTTGAGTGGTCATGGAATCGCTTTTCTAATTTCCCCAGAAAAAGCACTTCCAGGTGCTTTACCCAGTCAGTACTTAGGCCTCTTCAATAACACCAATAATGGCAATCGTACAAACCAAGTTTTCGCCGTAGAACTGGACACCATCCTCAGCAGTGAGTTTGACGATATCAATGATAACCATGTTGGAATCGACATTAATAGCTTGAAGTCTGCATCTGCTCCTGCAGGATATTATATGAACAAGTCTCAGTTTCAGAATCTGAGTCTCATTAGTGGCCTTCCAATGCAGGTCTGGGTGGAATACGATGGCGGAAAAAAGCAAATCAGTGTCACCCTAGCTCCGATCAACGTTAACAAACCCAAAACTCCACTGCTAACGTTGTCCCAAGATCTTTCTCAGATTATAGACAATCCCAGTTATGTCGGATTCTCATCTTCCACTGGGTCTGTCTTAACTTCTCATTATGTTCTTGGCTGGAGCTTCAAGCTCAATGGGGAGGCTCAAAACCTTGCTGTCTCTAAACTGCCGAAGCTACCACGACTTGGTGGAAGAAAACGATCTATGATTTTGCCAATTGGGTTACCTCTGTTTTCACTCTGTTTGATTTTTCTGGTGAGTTTATCGATAGTTTATTACATATACAGGAAAAGGAAGTTTTCTGAGATTCAGGAAGAGTGGGAGCAAGAATATGGTGCTCACAGGTTCAAATACAAAGACCTCTACGTTGCCACGAAGGGATTCAAGGATAAAGAGCTTCTAGGAGCTGGTGGATTTGGTAGAGTATACAAAGGAACAATGCCAACTTCAAAAGTTGGGGTTGCTGTGAAGAAAGTGTCGCATGAATCTCGACAAGGCATGAGGGAATTTGTAGCAGAAATTGTTAGTATCGGTCGTCTTCGCCACCGAAACGTCGTACCTCTTTTGGGATATTGTAGACGAAAACGAGAGCTTCTTCTAGTCTACGACTTCATGCCAAATGGAAGCTTAGATAAATATCTCTATAACCAACCAAGAGTGACACTGAACTGGAGACAAAGATTTAAAATCATCAAAGGAGTAGCTTCGGCATTGTGCTATCTACATGGAGAGTGTGAAAAAGTGGTTGTGCACAGAGACATAAAAGCAAGCAATGTTCTCCTTGATTCAGAACTGAATGGAAGATTAGGAGATTTTGGTCTTGCAAGATTATATGATCATGGGAGTGATCCTCAAACTACACATGTGGTCGGGATTGGTTATCTAGCGCCGGAGCAGACAAGAACAGGGAAAGCGACAACAAGGTCAGATGTTTTTGCTTTTGGTGCATTTTTACTTGAGTTGTGTGGAAGAAGGCCCATAGAGCAAGTGAATGAAGAAGAGAGTGTGATTTTAGTAGATTGGGTCTATGAGTTGTGGAATAGGGGTGAGATTATTATGGCAAAGGATCAGAATATGGGAATAGAGTATTGCATAGAAGAGGTAGAGTTAGTGTTGAAACTGGGTCTTTTGTGTTCAAACAGCCAAGCATTGAGTAGGCCAAGCATGCGTCAAGTAGTGCAGTGTCTGAATGGGGAGGTATCTTTGCCTGATTTGTCGTCTCTAAGCTTAGATTCTGCTTCTCCAGGCTTATCGTTTGGGCATCATCAAGAGTTTCCTGACTCTACTATGTCCTTTCCATCATTTGTTGATCAGTCTCTCTCTCACAGTTCTTCAGTAGCTGAATCGCTTCTCTCTGGAGGTCGTTGA 1998 0.4219 MSVKKLMAMMLLVVVISTVQVSGEDTSFIFNNGFXSANLTMDGISEITSNGLLRLTNETRQEKGHAFYPXPMVLNNSSFSTTFVFAIKSEYRTLSGHGIAFLISPEKALPGALPSQYLGLFNNTNNGNRTNQVFAVELDTILSSEFDDINDNHVGIDINSLKSAXSAPAGYYMNKSQFQNLSLISGLPMQVWVEYDGGKKQISVTLAPINVNKPKTPLLTLSQDLSQIIDNPSYVGFSSSTGSVLTSHYVLGWSFKLNGEAQNLAVSKLPKLPRLGGRKRSMILPIGLPLFSLCLIFLVSLSIVYYIYRKRKFSEIQEEWEQEYGAHRFKYKDLYVATKGFKDKELLGAGGFGRVYKGTMPTSKVGVAVKKVSHESRQGMREFVAEIVSIGRLRHRNVVPLLGYCRRKRELLLVYDFMPNGSLDKYLYNQPRVTLNWRQRFKIIKGVASALCYLHGECEKVVVHRDIKASNVLLDSELNGRLGDFGLARLYDHGSDPQTTHVVGTXGYLAPEQTRTGKATTRSDVFAFGAFLLELCXGRRPIEQVNEEESVILVDWVYELWNRGEIIMAKDQNMGIEYCIEEVELVLKLGLLCSNSQALSRPSMRQVVQCLNGEVSLPDLSSLSLDSASPGLSFGHHQEFPDSTMSFPSFVDQSLSHSSSVAESLLSGGR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0328 670 PANTHER - 21 618 - -
Prci12g0328 670 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0328 670 SUPERFAMILY Protein kinase-like (PK-like) 315 611 IPR011009 -
Prci12g0328 670 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Prci12g0328 670 FunFam L-type lectin-domain containing receptor kinase V.9 25 262 - -
Prci12g0328 670 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Prci12g0328 670 FunFam Lectin-domain containing receptor kinase A4.3 326 417 - -
Prci12g0328 670 Gene3D - 24 270 - -
Prci12g0328 670 Pfam Protein kinase domain 341 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0328 670 CDD STKc_IRAK 347 613 - -
Prci12g0328 670 SMART serkin_6 341 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g0328 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Prci12g0328 670 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Prci12g0328 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 275 IPR013320 -
Prci12g0328 670 Pfam Legume lectin domain 26 270 IPR001220 GO:0030246
Prci12g0328 670 FunFam L-type lectin-domain containing receptor kinase S.4 418 624 - -
Prci12g0328 670 CDD lectin_legume_LecRK_Arcelin_ConA 26 259 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0328 Prci-Chr12 2901916 2904137 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0328 20 670 Receptor kinase-like Gene Family AT2G37710 62.974 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci12g0328 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0328 - - gmx:100802293 895.19