LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci12g0321	ATGGCCACCCTGTTTCTCTTACTCTCCTCTGTTTTCCTCTTCCTTCTGATTCCTTCGTCTTCCCAGCTCGACGAAGTTTTCTTCCCGGGATTTAAGGGCGCCGGAGCCAACATAACCCTGAACGGAGTAGCAGCAATCGAGAAAAACGGAATCTTGCGGTTGACGAACCAGACAAATAGGTTGATGGGTCATGCTTTTTATTCGTCTCCATTCCAGCTCAGGAACTCCTCTACTGGTCAAGCTTTCTCCTTCTCTGCTTCCTTTGCTCTCGTCACTGTCCCTGTGTTCTTCAAGCTCGGTGGCCATGGCCTGGCTTTCACGATAGCAACTTCCAAAGATCTCAAAGCCTTGCCAAGTCAGTATCTTGGCCTCCTTAATTCCTCCGATATCGGAAATTTCTCCAACCATTTACTCGCCGTCGAGTTCGACACTGTCCAGGACTTCGAGTTCGGGGACAAGAACGATAACCATGTTGGAATCGACATCAACAGCTTGGTCTCTAACGCATCTGAGACTGCTGGGTATTACACCGACGATTCGGGCTTGAAGAAGCAAGATCTCAATATCTCCGGTGGGACGCCGATTATGGCTTGGGTAGATTACGATTCGGCTGCAAATCTCTTGAGCGTTACTCTTTCTCCTTTCTCGACAAAACCCAGAAAGCCGCTCTTGTCGTTCCCTGTGGATCTCTCACCGATTCTTAAAGATTATATGTATGTTGGGTTCTCTGCTTCCACGGGACTTCTCGCTAGCTCCCACTACATCTTGGGTTGGAGCTTCAAAATCAATGGTCCAGCTCGATCCCTCGATCTCTCTTCTCTCCCACATCTTCCTGGTCCGAAGAAGCAACCGACAAAGCTCATCATCGGCGTGACGGTGCCGGTTATATTTATTGCGTTATCCGCGATAGTAATCGGTGTTTATTTGTTCAGGAAAATAAAAAACGCCGACATAATAGAAGCGTGGGAGCTAGAAATCGGACCCCATCGATATTCCTACCAAGAGCTCAAGAAAGCGACAAGAGGTTTCAAGGACAAGGAGCTTCTCGGACAAGGTGGGTTTGGTCGAGTGTACAAAGGAACACTCCCGAGTTCGAAAACCCTGGTGGCAGTCAAACGAGTTTCCCACGAATCCAAACAGGGCCTTAGGGAGTTCGTCTCTGAAATCGCCAGCATTGGGCGTCTCCGTCACCGGAATCTCGTTCAACTCCTGGGCTGGTGTCGCCGGCGAGGCGACCTCCTCCTCGTGTACGATTACATGGCCAATGGTAGCTTAGACAAGTACCTATTCGACCAGCCGCATATTCTCACTTGGGAACAAAGGTTCAAGATCATAAAAGGTGTTGCTTCGGGTCTCCTATATCTCCACGAAGGATACGAACAAGTCGTTATTCACAGAGACGTTAAAGCAAGCAACGTCTTGCTAGACAACGAGCTCAACGGGAGGTTAGGAGATTTCGGTTTGGCTAGATTATACGAGCACGGGGCCAACCCAAGCACGACCAGAGTGGTGGGCACATTGGGCTATTTAGCTCCTGAGCTACCTCGAACTGGTCGAGCCACCACGAGCTCCGATGTTTATGCTTTTGGTGCTCTGATGCTGGAAGTGGTCTGCGGAAGAAGACCTATTGAACCAAAAGCTTTACCAGAAGAGCTGGTTTTAGTGGATTGGGTGTGGGACAATTACAGAGAAGGGAAGTTGCTGGACGTGGTGGATCCAAAGTTGAACGGTGAATATGATGAGACGGAGGTAGTGATGGTGTTGAAACTGGGTTTGATTTGTTCCAACGATGTTCCTAATAACAGGCCAAGTATGAAGCAATTGATGATGTTTTTGGATGGAGAAGTGGAAGTGCCAGAGAGTTTGAGAAAGCCAGGTGGAGGAGGGAATCATAGCCGTGAAGGGTTCGATGAGTTCTTGTTCAATTCGTTTGCGTCTTCTTCGTTTGGTGATAAGATGAGTGCGAGTTCTTATACTGGACACAGGGAGACATATGGTACTCATTTTGCTTCTTTTAATACTACTTCAGCTCTGTCTCTTCTCTGTGCCAGAGGAGAAACAAGGTGA	2067	0.4843	MATLFLLLSSVFLFLLIPSSSQLDEVFFPGFKGAGANITLNGVAAIEKNGILRLTNQTNRLMGHAFYSSPFQLRNSSTGQAFSFSASFALVTVPVFFKLGGHGLAFTIATSKDLKALPSQYLGLLNSSDIGNFSNHLLAVEFDTVQDFEFGDKNDNHVGIDINSLVSNASETAGYYTDDSGLKKQDLNISGGTPIMAWVDYDSAANLLSVTLSPFSTKPRKPLLSFPVDLSPILKDYMYVGFSASTGLLASSHYILGWSFKINGPARSLDLSSLPHLPGPKKQPTKLIIGVTVPVIFIALSAIVIGVYLFRKIKNADIIEAWELEIGPHRYSYQELKKATRGFKDKELLGQGGFGRVYKGTLPSSKTLVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDYMANGSLDKYLFDQPQXILTWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDNELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTSSDVYAFGALMLEVVCGRRPIEPKALPEELVLVDWVWDNYREGKLLDVVDPKLNGEYDETEVVMVLKLGLICSNDVPNNRPSMKQLMMFLDGEVEVPESLRKPGGGGNHSREGFDEFLFNSFASSSFGDKMSASSYTGHRETYGTHFASFNTTSALSLLCARGETR	689

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci12g0321	689	CDD	lectin_legume_LecRK_Arcelin_ConA	28	264	IPR001220	GO:0030246
	Prci12g0321	689	ProSitePatterns	Legume lectins beta-chain signature.	138	144	IPR019825	-
	Prci12g0321	689	ProSiteProfiles	Protein kinase domain profile.	343	613	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g0321	689	FunFam	L-type lectin-domain containing receptor kinase S.4	420	626	-	-
	Prci12g0321	689	SMART	serkin_6	343	613	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g0321	689	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	464	476	IPR008271	GO:0004672\|GO:0006468
	Prci12g0321	689	CDD	STKc_IRAK	349	609	-	-
	Prci12g0321	689	Pfam	Protein kinase domain	343	546	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g0321	689	SUPERFAMILY	Protein kinase-like (PK-like)	325	618	IPR011009	-
	Prci12g0321	689	Gene3D	-	26	270	-	-
	Prci12g0321	689	PANTHER	-	16	620	-	-
	Prci12g0321	689	Pfam	Legume lectin domain	28	274	IPR001220	GO:0030246
	Prci12g0321	689	SUPERFAMILY	Concanavalin A-like lectins/glucanases	26	280	IPR013320	-
	Prci12g0321	689	Gene3D	Transferase(Phosphotransferase) domain 1	420	625	-	-
	Prci12g0321	689	FunFam	Lectin-domain containing receptor kinase A4.3	328	419	-	-
	Prci12g0321	689	ProSitePatterns	Protein kinases ATP-binding region signature.	349	372	IPR017441	GO:0005524
	Prci12g0321	689	FunFam	L-type lectin-domain containing receptor kinase S.4	22	268	-	-
	Prci12g0321	689	Gene3D	Phosphorylase Kinase; domain 1	328	419	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci12g0321	Prci-Chr12	2857133	2859760	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci12g0321	20	674	Receptor kinase-like Gene Family	AT3G55550	59.879	0.0	783

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Prci12g0321		Pkinase	5.9e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci12g0321	-		-	jre:109006813	1016.53