Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0293 ATGGCTTCAAACCAACAAGTGAAGCTTTTCGGAACCGTAGGAAGTCCATTCGTGACGAGAGCAGAGATTGCTCTGAAACTCAAGGGAGTGGAGTACGAATACGTTCTCGAATCACTGACCAACAAAAGTGATCTTCTTCTCAAGTACAATCCGATTCACAAGAAGGTCCCTGTTCTTCTTCACGACGAGAAGCCCGTCTGCGAGTCGCTCGTGATCGTTGAATACATCGATGAGGCTTGGTCTGGCTACCCAATCTTGCCCTCTGATCCTTATCACAGAGCCCTGGCTCGTTTCTGGTCCAGGTTTATCGACGACAAGGTTTTACCTGCAGTATTTAAAGCAGCCTGGAACCCGAACGAGAAGGAGAGGGAAAATGGTGCTGCAGAATCAAGAGAGGCTCTGAAGATTCTGGAGAACGAGCTGAAAGGAAGGTTCTTCAACGGAGATTCGATCGGATTCGTGGACATCGCTGCTCTGTTCGTCGCTTTCTGGTTGCCAATAATTCAAGAAGCCGGCGGGCTTGATCTGTACAGCGGTGAGAAATATCCAAAGCTGGACAAGTGGGGTCAAGAGATTCTGAATGACCCTGTCGTGAAAGGAGTTTTGCCTCACAGGGAAAATCTCCTCACCTTCTTCAAAGCTCGCGTGCAGAGCATCTTTGGTTTGAAGTAG 672 0.4866 MASNQQVKLFGTVGSPFVTRAEIALKLKGVEYEYVLESLTNKSDLLLKYNPIHKKVPVLLHDEKPVCESLVIVEYIDEAWSGYPILPSDPYHRALARFWSRFIDDKVLPAVFKAAWNPNEKERENGAAESREALKILENELKGRFFNGDSIGFVDIAALFVAFWLPIIQEAGGLDLYSGEKYPKLDKWGQEILNDPVVKGVLPHRENLLTFFKARVQSIFGLK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0293 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Prci12g0293 223 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Prci12g0293 223 Gene3D - 89 221 - -
Prci12g0293 223 FunFam Tau class glutathione S-transferase 86 221 - -
Prci12g0293 223 SUPERFAMILY GST C-terminal domain-like 78 218 IPR036282 -
Prci12g0293 223 SFLD Main.3: Omega- and Tau-like 4 218 IPR045073 -
Prci12g0293 223 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Prci12g0293 223 Pfam Glutathione S-transferase, C-terminal domain 111 196 IPR004046 -
Prci12g0293 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 207 IPR045073 -
Prci12g0293 223 FunFam Glutathione S-transferase GSTU6 2 86 - -
Prci12g0293 223 SFLD Glutathione Transferase (cytosolic) 4 218 IPR040079 -
Prci12g0293 223 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Prci12g0293 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 220 IPR010987 -
Prci12g0293 223 Gene3D Glutaredoxin 1 88 - -
Prci12g0293 223 CDD GST_N_Tau 7 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0293 Prci-Chr12 2452092 2453186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0293 1 219 Glutathione S-transferase Gene Family AT3G09270 50.901 7.05e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0293 K00799 - gmx:100500680 293.123