Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0283 ATGTCGAGCATACAGATGCCCCATGTAGATTTAGAGCAAGGAGGTCACCATCGTTCGGTTGTCGCGAGTGACGTCAGCGCTGACGGGAGTGTATGCTTCTCTGACGCCGATGATGGGTCCTGCTATTCTCATTTCTACTCGACCTACGGTGGTTCATACGACGATTGTAGTTTCGCGTGCGTTTCTGATTCTGAGGTTAGATGTGTTGCTGATTCTAGGAGAACTTCTTCTGTGACTGATTGTTCGGTGGAAGTGGAAATTGAAAGTGAGGTTCCTGAAATTAAGGTGCATTTGGCCAAAGTAGAGAGAGATTGTAGGATTTGTCACTTGGGTTTGGAGAGTGATAGCAATGATGAGTCTGGGATTCCCATTGAATTGGGATGCTCTTGTAAGGATGATTTAGCTGCTGCTCACAAACACTGTGCTGAGGCCTGGTTCAAGATCAAAGGGAATAGGACTTGTGAAATTTGTCACTCGGTCGCCCGGAATGTTTATGGAGGGAACAAGGAGGTAACGGAGCATTCAAGTGAAAGCAATAATGCTCCTAGTGCAGCTGCAACAGCAGTCTCCACACCAGCACCTTCTGCGGAAACTGGAAGATTCTGGCATGGCCATAGGTTCCTGAACTTTCTGCTTGCTTGTATGGTTTTTGCTTTTGTCATATCATGGCTTTTTCACTTTAATGTACCTTCATCCTAA 699 0.4607 MSSIQMPHVDLEQGGHHRSVVASDVSADGSVCFSDADDGSCYSHFYSTYGGSYDDCSFACVSDSEVRCVADSRRTSSVTDCSVEVEIESEVPEIKVHLAKVERDCRICHLGLESDSNDESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGNRTCEICHSVARNVYGGNKEVTEHSSESNNAPSAAATAVSTPAPSAETGRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0283 232 ProSiteProfiles Zinc finger RING-CH-type profile. 97 164 IPR011016 GO:0008270
Prci12g0283 232 SMART ringv_2 104 158 IPR011016 GO:0008270
Prci12g0283 232 MobiDBLite consensus disorder prediction 171 191 - -
Prci12g0283 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 166 IPR013083 -
Prci12g0283 232 SUPERFAMILY RING/U-box 102 161 - -
Prci12g0283 232 PANTHER ZINC FINGER, RING-CH-TYPE 18 231 - -
Prci12g0283 232 Pfam RING-variant domain 105 157 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0283 Prci-Chr12 2358132 2361836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0283 63 232 C3H Transcription Factor Family AT5G05830 59.064 1.35e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0283 - - qsa:O6P43_026440 354.369