Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0252 ATGATTGTTGCTATGGACTTGAATGCCTCACCGGTGCCTGAGGAAGATGATGATATTTTTGAGAGACATATAGAAGAGTATATCCAACCAGAAGAACGCATAGAAACTGCAGTTGATATAGCACGTCGTGAGCGTGAAGAAAGGAAAAGACGGCTGAAAAGAGAACGGACAGACGATAGACCTGCCCATGTATCACAGTCGACAACTGGTTATGATCAGACCTTTCATGCAAAGTTTCTCAAGTCATATGATAAAAGTAGGCTTCCTCCAGGCTGGTTGGATTGCCCTTCATTTGGTCAGGAAATATACTGCTTAATACCTTCCAAGGTTCCACTTGGTGAATCATTCAATGACTGTATTGCTCCTGGTCGAAGATACTCATTTAAACAAGTTATACATCAACAACGAGTTCTGGGGAGAAAACTTGGTTTGGTGATTGATCTGACAAATACTACTCGTTACTATCCAGTTTTAGATCTGAAGAAAGAGGGTATCAAGCATATTAAGATTCAATGCAAGGGGCGTGATTCTGTACCTGATAATTTGTCTGTGAATCAATTTGTCCATGAGGTTACTCAATTTCTATCACGTCAAAAACAAGCAAAGAAGTATATACTTGTCCATTGTACACATGGACATAATCGTACTGGATACATGATTGTCCATTATCTTATGCGCACTATGTCTATGTCGGTCACCCAGGCAATTAAATTATTTTCTGAAGCACGCCCCCCAGGAATTTATAAACCTGATTATATTGATGCTTTGTACACATTTTATCATGAAAAAAAACCTGAAATGGTAGTTTGTCCTCCTACACCAGAGTGGAAGAGATCCTCTGAATTTGATCTCAATGGTGAAGCAATGCCAGATGATGATGATGATGGAGTGCCATGCCCTCCTCAGGAGAACCATGAGACAGATGCAGTGATGACAAACGATGATGTTTTGGGAGATGAAATACCTCTTGATCAACAAGATGGATTTCGACAGTTCTGTTATCAATCTCTTAAATTGAATTTTGGGGCCAGAGGACACTCACATTTTCCAGGTTCCCATCCAGTTTCTCTTAATAGGGAAAATTTACAATTACTACGACAGCGTTATTATTATGCAACTTGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGATGGATGTTACTTGATTGATAGAAGTTTCAATTTTCGAAGGGTGCAAATGAGGTTTCCTTGCAGAGGCTCAAATGATGGTTTGGCTGAGAAGACCCACCACTACACATTACTTGATGGGGAGATGATCATTGATACATTGCCTGATTCACAGAAACAGGAGAGGAGATACCTCATATATGATATGATAGCAATTAATCACGTATCAGTAATAGAGTCTGATTCTATCAACCGTACCCAAGCAAAGAAGCCTTTAGACATCTATTATTGTAGAGAGGAATATGTGGTTGCACAAATTAGCAATCACTGGTATACCACACATCTCACATTTTTGTCCAAGCGACCGTTCTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGAAATCAGGAACGGCATAATACGTACCAGAGCAGAAATCCTTATTATAGATATGACCTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACCGTGACAAAGCTTTTAAATGAATTCATTAAGAAACTCTCCCATGATGCAGATGGCCTCATATTTCAGGGTTGGGATGATCCTTATATACCCCGCACTCATGAGGGCCTCCTGAAGTGGAAATATCCTGAGATGAATTCAGTAGATTTTCTCTTTGAGATTGACGATGATCACCAATCACTTTTCCTTCATGAACGAGGAAAGAAGAAACTCATGGAAGGGAATAGGGTTGCATTCAGAGATGGTTCAGATCCCTTGCTTCATTCGGGGAAGATCATAGAGTGTTCTTGGGATTTGAATGAACAGGAATGGGTATACATGCGAACCAGGACGGATAAATCAACTCCAAATGATTTTAATACTTACAAGAAGGTTATGCGGAGTATAAAAGACAACATCACGGAGGATGTCTTGTTGAATGAAATTTACGAGATAATTCGCCTTCCAATGTATGCCGACAGGATAAAAAATGAGAGCAAAGCCCACCAGCATGTTGGTGTAGCACGCCGAAGGTGA 2169 0.4006 MIVAMDLNASPVPEEDDDIFERHIEEYIQPEERIETAVDIARREREERKRRLKRERTDDRPAHVSQSTTGYDQTFHAKFLKSYDKSRLPPGWLDCPSFGQEIYCLIPSKVPLGESFNDCIAPGRRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVLDLKKEGIKHIKIQCKGRDSVPDNLSVNQFVHEVTQFLSRQKQAKKYILVHCTHGHNRTGYMIVHYLMRTMSMSVTQAIKLFSEARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAMPDDDDDGVPCPPQENHETDAVMTNDDVLGDEIPLDQQDGFRQFCYQSLKLNFGARGHSHFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGSNDGLAEKTHHYTLLDGEMIIDTLPDSQKQERRYLIYDMIAINHVSVIESDSINRTQAKKPLDIYYCREEYVVAQISNHWYTTHLTFLSKRPFYERWKMLEKEVIEPRNQERHNTYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLNEFIKKLSHDADGLIFQGWDDPYIPRTHEGLLKWKYPEMNSVDFLFEIDDDHQSLFLHERGKKKLMEGNRVAFRDGSDPLLHSGKIIECSWDLNEQEWVYMRTRTDKSTPNDFNTYKKVMRSIKDNITEDVLLNEIYEIIRLPMYADRIKNESKAHQHVGVARRR 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0252 722 Gene3D - 593 684 IPR012340 -
Prci12g0252 722 Gene3D DNA ligase/mRNA capping enzyme 306 488 - -
Prci12g0252 722 CDD RNA_5'-triphosphatase 91 257 - -
Prci12g0252 722 Pfam mRNA capping enzyme, C-terminal domain 597 690 IPR013846 -
Prci12g0252 722 PIRSF mRNA_capping_HCE 492 722 IPR017074 GO:0004484|GO:0006370|GO:0140818
Prci12g0252 722 PIRSF mRNA_capping_HCE 75 489 IPR017074 GO:0004484|GO:0006370|GO:0140818
Prci12g0252 722 Pfam Dual specificity phosphatase, catalytic domain 140 260 IPR000340 GO:0008138|GO:0016311
Prci12g0252 722 PANTHER MRNA-CAPPING ENZYME 83 704 - -
Prci12g0252 722 Gene3D Protein tyrosine phosphatase superfamily 84 296 IPR029021 -
Prci12g0252 722 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 185 254 IPR000387 GO:0016311|GO:0016791
Prci12g0252 722 Gene3D DNA ligase/mRNA capping enzyme 490 592 - -
Prci12g0252 722 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 88 277 IPR029021 -
Prci12g0252 722 MobiDBLite consensus disorder prediction 45 68 - -
Prci12g0252 722 FunFam mRNA capping enzyme family protein 591 699 - -
Prci12g0252 722 FunFam mRNA capping enzyme family protein 84 298 - -
Prci12g0252 722 SMART dsp_5 122 262 IPR020422 GO:0006470|GO:0008138
Prci12g0252 722 Pfam mRNA capping enzyme, catalytic domain 353 468 IPR001339 GO:0004484|GO:0005524|GO:0006370
Prci12g0252 722 Pfam mRNA capping enzyme, catalytic domain 497 592 IPR001339 GO:0004484|GO:0005524|GO:0006370
Prci12g0252 722 CDD Adenylation_mRNA_capping 349 593 IPR001339 GO:0004484|GO:0005524|GO:0006370
Prci12g0252 722 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 315 470 - -
Prci12g0252 722 ProSitePatterns Tyrosine specific protein phosphatases active site. 207 217 IPR016130 GO:0016311|GO:0016791
Prci12g0252 722 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 266 IPR020422 GO:0006470|GO:0008138
Prci12g0252 722 SUPERFAMILY Nucleic acid-binding proteins 595 707 IPR012340 -
Prci12g0252 722 Coils Coil 38 58 - -
Prci12g0252 722 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 498 593 - -
Prci12g0252 722 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0252 Prci-Chr12 2073872 2088435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0252 1 722 Protein tyrosine phosphatase (PTP) family AT3G09100 66.255 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0252 K13917 - qsa:O6P43_016658 1153.66